Rroxscaffold_1G00070480

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000112
Physical Location & Seq
Reverse (-)
91388689 .. 91392688
4000 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070480.1

Sequence Viewer

Length: 1848 bp
ATGACCCTATTTGGAAAAGTTCAAAGTAGAAGAACTGTCCAGAAGATCAACGTAATGCGACTGATCTCATTGCTCACCGGCTCAAGTATGAAAATGAGAAGAAACAAAATACCATTGGTTCGTTCCTACAGAATTGAAAATACAGAGAAAATGGTTTTGAAAGCTCTGCTTCTCTTTCTCCTCTTTCAGTTCTGCACTTCCAGGGACACCATAAGGGGGAACGAAGAACAATTGAAGGATGTTGATGGTGACTATTTAGTGTCCAAAGAAAGCAAGTTTGAATTGGGTTTCTTCAGCCCTGGAAATTCTAGCTACCGGTATGTTGGAATTTGGTATTCTCAGACTAAAGTATCTGAAAAAACAGTGGTGTGGGTTGCAAACAGAAACAATCCCATCAATGATACCTCTGGTGTGCTCACATTTAACAGGTATGGAGAACTAGTCCTTTATGCTCATAACATAAAGAGTATTCCTATATGGTCCACAAATGTGTCGCAGTCGGTTCAAAATGTTAACACAAGCACTATATCTGCACAGCTTTTGGATACAGGAAATTTAGTTGTGTTCCAGGATGATAATAATGATATCTTTATATGGCAAAGTTTTGATTATCCTACAGATACTCTGCTTCCAGGAATGAGACTTGGATTGAATCGGAAAACTGGACTAGAATGGGTTATAACATCCTGGAAATCACAAGATGACCCTGGAACTGGGGACTATACACATAGGCTTTATTCAAATCAGACTGCAACCCCCCAATTTTTTACATATAAAGGTTCAAGTAAGTACTGGCGACCTAATCCAGGGCCATCTGCTAGTGTGGTCACTAATCAAGACGAAACTTATTTTTACTTCCTGAATAACACCAATGGAATTGAAAGAATAATTTTGAATGGTTCAGAGTTACAGTGCCTTACATGGAGTGATGGAAACCATCAATGGAAGGAAACCTATGCTGTACCGACATTCCGGTGTGACTGGTATGGACATTGTGGTGCCAACAGCAAATGTAGCCCAGACAATGATAATCTGTTTGAGTGTGACTGTCTACCCGGTTTTGAACCAAACTCTGTCAATGAGTGGAATCAGAATGATGGGTCAGATGGATGTGTGAGTAAGCGAAATGAAGTTTCTAAGTGTGAGAATGGGGAAGGGTTTGTGAAGGTGACGAGAGTTAAAATTCCAGACGTATCAATAGCAGCTCGATTGGAAGCACATATGAGTAACAAAGTGTGTGGGCAGAAGTGCTTGGCAAATTGTTCTTGCACAGCATATATGAGCATTGAAAAAGAAAAAGGGGTTGTTGATTGTTTGACGTGGTATGATGATTTGATGGATATTTTAGTGTTCACAGAGATTGGACGAGATCTATATGTTCGTGTGGATCGAATTGAATTAGCTAAGAATTCTAGAAAATCAAAAGGTTTCTTAGAGAAAAGGGGTATGCTGGCTATTCCAATACTCTTTTCTCTGCTAGCGTTGGTACCAATCATTATGTGCGCCTGCTGGTGGCGTAAGAAAAAACGGAATACAGCAGAAATTGTGGAGGCGGATGAACTTGAGGAAACTAACAGACACCCTGAATTGCAATTTTTCAATCTGAACACACTAATGGCAGCCACAGATAACTTCTCTCATGTCAATGAACTCGGCCAAGGTGGTTTTGGCTCTGTTTATAAGGGTCAGTTACCAAATGAGCAGAAGGTTGCTGTAAAAAGGTTGTCTAAAACATCAGGACAAGGGACTGAAGAATTCAAAAATGAAGTTGCACTTATAGCAAGACTTCAACACCGCAATCTCGTAAAACTCCTAGGCTGTTGTATAAGGGGGGAGAACGAATGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

615

Amino Acids

69.9

Weight (kDa)

7.97

Isoelectric Point (pI)

35.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 121 - 231 1.2e-36 D-mannose binding lectin
S_locus_glycop PF00954 277 - 357 7.5e-14 S-locus glycoprotein domain
PAN_2 PF08276 381 - 448 4.6e-15 PAN-like domain
Pkinase PF00069 546 - 609 1.1e-08 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 548 - 612 4e-12 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 680, 1680
Acc65I GGTACC 1 cut(s) 1486
AccB1I GGYRCC 2 cut(s) 998, 1486
AccI GTMKAC 1 cut(s) 1051
AciI CCGC 2 cut(s) 1553, 1795
AclWI GGATC 1 cut(s) 1395
AcoI YGGCCR 1 cut(s) 1654
AcsI RAATTY 6 cut(s) 304, 327, 553, 1182, 1408, 1754
AcuI CTGAAG 2 cut(s) 277, 1770
AfaI GTAC 3 cut(s) 791, 963, 1488
AfiI CCNNNNNNNGG 4 cut(s) 216, 713, 806, 1512
AgeI ACCGGT 1 cut(s) 315
AhlI ACTAGT 1 cut(s) 439
AjiI CACGTC 1 cut(s) 1320
AjnI CCWGG 7 cut(s) 200, 298, 567, 631, 686, 706, 805
AjuI GAANNNNNNNTTGG 2 cut(s) 1453, 1485
AleI CACNNNNGTG 1 cut(s) 488
AluBI AGCT 5 cut(s) 164, 312, 538, 1205, 1403
AluI AGCT 5 cut(s) 164, 312, 538, 1205, 1403
Alw21I GWGCWC 1 cut(s) 417
Alw26I GTCTC 1 cut(s) 634
AlwI GGATC 1 cut(s) 1395
AoxI GGCC 2 cut(s) 809, 1654
ApeKI GCWGC 2 cut(s) 1202, 1619
ApoI RAATTY 6 cut(s) 304, 327, 553, 1182, 1408, 1754
AsiGI ACCGGT 1 cut(s) 315
Asp718I GGTACC 1 cut(s) 1486
AspA2I CCTAGG 1 cut(s) 1813
AspLEI GCGC 1 cut(s) 1505
AspS9I GGNCC 2 cut(s) 480, 809
AsuC2I CCSGG 1 cut(s) 1056
AsuHPI GGTGA 3 cut(s) 67, 260, 1180
AsuNHI GCTAGC 1 cut(s) 1477
AvaII GGWCC 1 cut(s) 480
AvrII CCTAGG 1 cut(s) 1813
BaeI ACNNNNGTAYC 2 cut(s) 333, 366
BanI GGYRCC 2 cut(s) 998, 1486
Bbv12I GWGCWC 1 cut(s) 417
BbvI GCAGC 2 cut(s) 1214, 1631
BccI CCATC 8 cut(s) 239, 401, 820, 923, 945, 1091, 1100, 1330
BciT130I CCWGG 7 cut(s) 202, 300, 569, 633, 688, 708, 807
BciVI GTATCC 1 cut(s) 538
BcnI CCSGG 1 cut(s) 1056
BcoDI GTCTC 1 cut(s) 634
BcuI ACTAGT 1 cut(s) 439
BfaI CTAG 7 cut(s) 309, 440, 668, 819, 1413, 1478, 1814
BfmI CTRYAG 2 cut(s) 127, 615
BfuI GTATCC 1 cut(s) 538
BglII AGATCT 1 cut(s) 1369
BisI GCNGC 2 cut(s) 1203, 1620
BlnI CCTAGG 1 cut(s) 1813
BlsI GCNGC 2 cut(s) 1204, 1621
BmcAI AGTACT 1 cut(s) 791
Bme1390I CCNGG 8 cut(s) 202, 300, 569, 633, 688, 708, 807, 1056
Bme18I GGWCC 1 cut(s) 480
BmgBI CACGTC 1 cut(s) 1320
BmgT120I GGNCC 2 cut(s) 480, 809
BmiI GGNNCC 2 cut(s) 1000, 1488
BmrFI CCNGG 8 cut(s) 202, 300, 569, 633, 688, 708, 807, 1056
BmrI ACTGGG 1 cut(s) 723
BmtI GCTAGC 1 cut(s) 1481
BmuI ACTGGG 1 cut(s) 723
BpuEI CTTGAG 2 cut(s) 67, 1583
BpuMI CCSGG 1 cut(s) 1056
BsaJI CCNNGG 6 cut(s) 201, 298, 706, 806, 1657, 1813
BsaWI WCCGGW 2 cut(s) 315, 972
BsaXI ACNNNNNCTCC 2 cut(s) 426, 456
Bsc4I CCNNNNNNNGG 4 cut(s) 216, 713, 806, 1512
Bse118I RCCGGY 2 cut(s) 77, 315
Bse1I ACTGG 4 cut(s) 667, 718, 797, 986
Bse3DI GCAATG 1 cut(s) 68
BseBI CCWGG 7 cut(s) 202, 300, 569, 633, 688, 708, 807
BseDI CCNNGG 6 cut(s) 201, 298, 706, 806, 1657, 1813
BseGI GGATG 5 cut(s) 244, 577, 683, 1115, 1561
BseLI CCNNNNNNNGG 4 cut(s) 216, 713, 806, 1512
BseMI GCAATG 1 cut(s) 68
BseMII CTCAG 1 cut(s) 353
BseNI ACTGG 4 cut(s) 667, 718, 797, 986
BseRI GAGGAG 1 cut(s) 170
BseXI GCAGC 2 cut(s) 1214, 1631
BsgI GTGCAG 2 cut(s) 178, 516
BshFI GGCC 2 cut(s) 811, 1656
BshNI GGYRCC 2 cut(s) 998, 1486
BshTI ACCGGT 1 cut(s) 315
BsiHKAI GWGCWC 1 cut(s) 417
BsiSI CCGG 4 cut(s) 78, 316, 973, 1056
BslFI GGGAC 3 cut(s) 218, 731, 1759
BslI CCNNNNNNNGG 4 cut(s) 216, 713, 806, 1512
BsmAI GTCTC 1 cut(s) 634
BsmFI GGGAC 3 cut(s) 218, 731, 1759
BsnI GGCC 2 cut(s) 811, 1656
Bsp1286I GDGCHC 1 cut(s) 417
Bsp143I GATC 4 cut(s) 45, 63, 1369, 1387
BspACI CCGC 2 cut(s) 1553, 1795
BspANI GGCC 2 cut(s) 811, 1656
BspCNI CTCAG 1 cut(s) 352
BspLI GGNNCC 2 cut(s) 1000, 1488
BspOI GCTAGC 1 cut(s) 1481
BspPI GGATC 1 cut(s) 1395
BspT107I GGYRCC 2 cut(s) 998, 1486
BsrDI GCAATG 1 cut(s) 68
BsrFI RCCGGY 2 cut(s) 77, 315
BsrI ACTGG 4 cut(s) 667, 718, 797, 986
BssAI RCCGGY 2 cut(s) 77, 315
BssECI CCNNGG 6 cut(s) 201, 298, 706, 806, 1657, 1813
BssMI GATC 4 cut(s) 45, 63, 1369, 1387
BssT1I CCWWGG 2 cut(s) 1657, 1813
Bst2UI CCWGG 7 cut(s) 202, 300, 569, 633, 688, 708, 807
Bst4CI ACNGT 4 cut(s) 37, 364, 912, 1049
BstC8I GCNNGC 3 cut(s) 1452, 1479, 1507
BstDEI CTNAG 4 cut(s) 339, 1137, 1404, 1432
BstENI CCTNNNNNAGG 1 cut(s) 804
BstF5I GGATG 5 cut(s) 244, 577, 683, 1115, 1561
BstHHI GCGC 1 cut(s) 1505
BstKTI GATC 4 cut(s) 48, 66, 1372, 1390
BstMAI GTCTC 1 cut(s) 634
BstMBI GATC 4 cut(s) 45, 63, 1369, 1387
BstMWI GCNNNNNNNGC 2 cut(s) 1014, 1778
BstNI CCWGG 7 cut(s) 202, 300, 569, 633, 688, 708, 807
BstSCI CCNGG 8 cut(s) 200, 298, 567, 631, 686, 706, 805, 1054
BstSFI CTRYAG 2 cut(s) 127, 615
BstV1I GCAGC 2 cut(s) 1214, 1631
BstX2I RGATCY 1 cut(s) 1369
BstYI RGATCY 1 cut(s) 1369
BsuI GTATCC 1 cut(s) 538
BsuRI GGCC 2 cut(s) 811, 1656
BtrI CACGTC 1 cut(s) 1320
BtsCI GGATG 5 cut(s) 244, 577, 683, 1115, 1561
BtsIMutI CAGTG 2 cut(s) 369, 917
Cac8I GCNNGC 3 cut(s) 1452, 1479, 1507
CfoI GCGC 1 cut(s) 1505
Cfr10I RCCGGY 2 cut(s) 77, 315
Cfr13I GGNCC 2 cut(s) 480, 809
Csp6I GTAC 3 cut(s) 790, 962, 1487
CspAI ACCGGT 1 cut(s) 315
CspCI CAANNNNNGTGG 2 cut(s) 1219, 1254
CviAII CATG 2 cut(s) 921, 1640
CviQI GTAC 3 cut(s) 790, 962, 1487
DdeI CTNAG 4 cut(s) 339, 1137, 1404, 1432
DpnI GATC 4 cut(s) 47, 65, 1371, 1389
DpnII GATC 4 cut(s) 45, 63, 1369, 1387
EaeI YGGCCR 1 cut(s) 1654
EciI GGCGGA 1 cut(s) 1568
Eco130I CCWWGG 2 cut(s) 1657, 1813
Eco32I GATATC 1 cut(s) 586
Eco47I GGWCC 1 cut(s) 480
Eco57I CTGAAG 2 cut(s) 277, 1770
EcoNI CCTNNNNNAGG 1 cut(s) 804
EcoRI GAATTC 2 cut(s) 1408, 1754
EcoRII CCWGG 7 cut(s) 200, 298, 567, 631, 686, 706, 805
EcoRV GATATC 1 cut(s) 586
EcoT14I CCWWGG 2 cut(s) 1657, 1813
ErhI CCWWGG 2 cut(s) 1657, 1813
FaeI CATG 2 cut(s) 924, 1643
FalI AAGNNNNNCTT 4 cut(s) 153, 185, 1758, 1790
FaqI GGGAC 3 cut(s) 218, 731, 1759
FatI CATG 2 cut(s) 920, 1639
FauNDI CATATG 1 cut(s) 1221
FblI GTMKAC 1 cut(s) 1051
Fnu4HI GCNGC 2 cut(s) 1203, 1620
FokI GGATG 5 cut(s) 251, 584, 670, 1122, 1568
Fsp4HI GCNGC 2 cut(s) 1203, 1620
FspBI CTAG 7 cut(s) 309, 440, 668, 819, 1413, 1478, 1814
GlaI GCGC 1 cut(s) 1504
GluI GCNGC 2 cut(s) 1203, 1620
HaeIII GGCC 2 cut(s) 811, 1656
HapII CCGG 4 cut(s) 78, 316, 973, 1056
HhaI GCGC 1 cut(s) 1505
Hin1II CATG 2 cut(s) 924, 1643
Hin6I GCGC 1 cut(s) 1503
HinP1I GCGC 1 cut(s) 1503
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HinfI GANTC 2 cut(s) 652, 1087
HpaI GTTAAC 1 cut(s) 514
HpaII CCGG 4 cut(s) 78, 316, 973, 1056
HphI GGTGA 3 cut(s) 67, 260, 1180
Hpy166II GTNNAC 4 cut(s) 483, 514, 1052, 1353
Hpy188I TCNGA 8 cut(s) 342, 355, 657, 747, 904, 1092, 1105, 1605
Hpy188III TCNNGA 6 cut(s) 40, 836, 859, 1187, 1413, 1737
Hpy8I GTNNAC 4 cut(s) 483, 514, 1052, 1353
HpyAV CCTTC 5 cut(s) 229, 940, 1148, 1159, 1699
HpyCH4III ACNGT 4 cut(s) 37, 364, 912, 1049
HpyCH4IV ACGT 3 cut(s) 51, 1191, 1319
HpyCH4V TGCA 7 cut(s) 195, 377, 533, 752, 1269, 1591, 1772
HpyF10VI GCNNNNNNNGC 2 cut(s) 1014, 1778
HpyF3I CTNAG 4 cut(s) 339, 1137, 1404, 1432
HpySE526I ACGT 3 cut(s) 51, 1191, 1319
Hsp92II CATG 2 cut(s) 924, 1643
HspAI GCGC 1 cut(s) 1503
KpnI GGTACC 1 cut(s) 1490
KspAI GTTAAC 1 cut(s) 514
Kzo9I GATC 4 cut(s) 45, 63, 1369, 1387
Lsp1109I GCAGC 2 cut(s) 1214, 1631
MaeI CTAG 7 cut(s) 309, 440, 668, 819, 1413, 1478, 1814
MaeII ACGT 3 cut(s) 51, 1191, 1319
MaeIII GTNAC 8 cut(s) 248, 826, 906, 977, 1043, 1168, 1226, 1689
MalI GATC 4 cut(s) 47, 65, 1371, 1389
MboI GATC 4 cut(s) 45, 63, 1369, 1387
MboII GAAGA 6 cut(s) 42, 55, 111, 236, 283, 1763
MfeI CAATTG 1 cut(s) 230
MflI RGATCY 1 cut(s) 1369
MhlI GDGCHC 1 cut(s) 417
MmeI TCCRAC 1 cut(s) 304
MnlI CCTC 4 cut(s) 191, 415, 1543, 1558
MseI TTAA 3 cut(s) 423, 513, 1179
MslI CAYNNNNRTG 5 cut(s) 488, 973, 996, 1613, 1644
MspI CCGG 4 cut(s) 78, 316, 973, 1056
MspR9I CCNGG 8 cut(s) 202, 300, 569, 633, 688, 708, 807, 1056
MunI CAATTG 1 cut(s) 230
MvaI CCWGG 7 cut(s) 202, 300, 569, 633, 688, 708, 807
MwoI GCNNNNNNNGC 2 cut(s) 1014, 1778
NciI CCSGG 1 cut(s) 1056
NdeI CATATG 1 cut(s) 1221
NdeII GATC 4 cut(s) 45, 63, 1369, 1387
NheI GCTAGC 1 cut(s) 1477
NlaIII CATG 2 cut(s) 924, 1643
NlaIV GGNNCC 2 cut(s) 1000, 1488
NmeAIII GCCGAG 1 cut(s) 1632
NmuCI GTSAC 5 cut(s) 248, 826, 977, 1043, 1168
OliI CACNNNNGTG 1 cut(s) 488
PcsI WCGNNNNNNNCGW 1 cut(s) 1387
PfeI GAWTC 2 cut(s) 652, 1087
PfoI TCCNGGA 3 cut(s) 567, 631, 686
PinAI ACCGGT 1 cut(s) 315
PkrI GCNGC 2 cut(s) 1204, 1621
PsiI TTATAA 2 cut(s) 680, 1680
Psp6I CCWGG 7 cut(s) 200, 298, 567, 631, 686, 706, 805
PspGI CCWGG 7 cut(s) 200, 298, 567, 631, 686, 706, 805
PspN4I GGNNCC 2 cut(s) 1000, 1488
PspPI GGNCC 2 cut(s) 480, 809
PsuI RGATCY 1 cut(s) 1369
RsaI GTAC 3 cut(s) 791, 963, 1488
RsaNI GTAC 3 cut(s) 790, 962, 1487
RseI CAYNNNNRTG 5 cut(s) 488, 973, 996, 1613, 1644
SaqAI TTAA 3 cut(s) 423, 513, 1179
SatI GCNGC 2 cut(s) 1203, 1620
Sau3AI GATC 4 cut(s) 45, 63, 1369, 1387
Sau96I GGNCC 2 cut(s) 480, 809
ScaI AGTACT 1 cut(s) 791
ScrFI CCNGG 8 cut(s) 202, 300, 569, 633, 688, 708, 807, 1056
SduI GDGCHC 1 cut(s) 417
SfcI CTRYAG 2 cut(s) 127, 615
SinI GGWCC 1 cut(s) 480
SmiMI CAYNNNNRTG 5 cut(s) 488, 973, 996, 1613, 1644
SmlI CTYRAG 2 cut(s) 82, 1562
SmoI CTYRAG 2 cut(s) 82, 1562
SpeI ACTAGT 1 cut(s) 439
SsiI CCGC 2 cut(s) 1553, 1795
SspMI CTAG 7 cut(s) 309, 440, 668, 819, 1413, 1478, 1814
StyD4I CCNGG 8 cut(s) 200, 298, 567, 631, 686, 706, 805, 1054
StyI CCWWGG 2 cut(s) 1657, 1813
TaaI ACNGT 4 cut(s) 37, 364, 912, 1049
TaiI ACGT 3 cut(s) 54, 1194, 1322
TaqI TCGA 2 cut(s) 1207, 1390
TatI WGTACW 1 cut(s) 789
TfiI GAWTC 2 cut(s) 652, 1087
Tru1I TTAA 3 cut(s) 423, 513, 1179
Tru9I TTAA 3 cut(s) 423, 513, 1179
TscAI CASTG 2 cut(s) 369, 917
TseFI GTSAC 5 cut(s) 248, 826, 977, 1043, 1168
TseI GCWGC 2 cut(s) 1202, 1619
Tsp45I GTSAC 5 cut(s) 248, 826, 977, 1043, 1168
TspDTI ATGAA 5 cut(s) 104, 1143, 1572, 1662, 1779
TspGWI ACGGA 1 cut(s) 1543
TspRI CASTG 2 cut(s) 369, 917
VpaK11BI GGWCC 1 cut(s) 480
XagI CCTNNNNNAGG 1 cut(s) 804
XapI RAATTY 6 cut(s) 304, 327, 553, 1182, 1408, 1754
XbaI TCTAGA 1 cut(s) 1412
XcmI CCANNNNNNNNNTGG 1 cut(s) 1664
XmaJI CCTAGG 1 cut(s) 1813
XmiI GTMKAC 1 cut(s) 1051
XspI CTAG 7 cut(s) 309, 440, 668, 819, 1413, 1478, 1814
ZrmI AGTACT 1 cut(s) 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.