Rw5G004890

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
5071630 .. 5074827
3198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G004890.1

Sequence Viewer

Length: 2466 bp
ATGCCACTGTTTCATACCAACAAAGTTGCAAATGCCCAGAAAATGCTATTCAAAGCTCTGCTTCTCTTCCTACTCTTCCGATTTTGCGAATCCAGGGACACCATAACATGGAACCAAGAACAACTGAAGGATGATGGTGGAGTTTTGGTGTCCAAACAGAGCAAGTTTGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCTACCGGTATGTTGGAATTTGGTATTCTCAGACTAGAGTATCTAATAAAATAGTGGTGTGGGTTGCAAACAGGAACAATCCCATCAATGATACCTCTGGTGTGCTCACAATAAACAGGTATGGAGAACTAGTCCTTTATGCTAATAACATGGAGAGCAGACCTATTTGGTATACTAATGTGTCGCGGTCGGTTCAAAATGTTAACACAAGCACCTTATCTGCACAGCTTTTAGATACAGGAAATCTAGTTGCGTTCCAGGATGATAATAATGAAAACTTTTTATGGCAAAGTTTTGATCACCCCACAGATACTTTAATTCCAGGTATGAAAGTTGGGATGAATTGGAAAACTGGGCAAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGGCTATACCTTAAGGCTCTATCCAAATCAGATTGCATCCCCCCAATTTTTTATGTACAAGGGTTCGAGTAAGTATTGGCGAAGTGATCCAGGGACAATGGGTTTGGTCACTAATCAAGAGGAAACTTATTATCCCATGAGTAACACCAATGCAATTACAAGAGCAACAGTGATTAATTCTGCGGTAGAAGGCTTTACATGGGATGATGTTGGCCTTCAATGGAAGGTAGGCTTCTCTGCACCGAAGTCCCGGTGTGACTGGTATGGAGAGTGCGGTGCCAACAGCAAATGTCTCCCTGACAATGTTATTATGTTTTGGTGTGAATGTTTACCAGGGTATGTGCCTAATTCTATAAGTGATTGGAATCATAAAAATGGGTCAGGTGGATGTGTGAGTAATCGACTTGGTTTGTTGAAGTGTGGAGATGGAGACGGGTTTGTGAAGGTGGCAAGAGTTAAATATCCTGACACATCGATAGGATCATTGTCAAAATCAGGTATGAGTGCCAAAGAGTGTGAGCAGGAGTGCCTAAGAAATTGTTCTTGCACCGCATATTTGAGCACTGAAAATGAAGGGCGTGTTGATTGCTTGACATGGTATGATGACTTGATGGACATTAAAATGTACACAGAGATTGGACAAGATCTCTACGTTCGTGTGAATGCGACCGTGTTAGCTGCAAATGCCAGAAGATCAGAAGGTTTCTTGGAAAGGAGGGGTATGCTGGCTATTCCAATACTGTCTGCTGTGCTAGCATTGGTACTAATCATTATGCTTGCATGTTGGTGGCGCAAGAAGAACAGGAAAACAAAAGACTTTGTGGAGGCAGAGGAGCTTGTGGAAAAACAGAGACACCCTGAATTGCAATTTTTCGATCTTGACACAATAGTCGCAGCAACAGACCACTTCTCTCGTGTCAATGAACTTGGCCATGGTGGATTTGGCTCTGTTTATAAGGGTCAGCTACCAAATGAACAGAAAGTTGCTGTGAAAAGATTGTCCCAAACTTCAGGACAAGGGATCGAAGAATTCAAAAATGAAGTTGCACTTATAGCAAGACTTCAACACAGGAATCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTGCTAGAATACATGCCTAACAAAAGCTTGAACTCCTTTCTTTTTGATAACACAAGACGGTCCTTCTTGGATTGGGAAAAGCGCTTTGAAATTATCAACGGGATTGCTCGTGGGATTCTGTATCTTCACCAAGACTCAAGATTGAGGATCATCCATAGAGATCTGAAAACTAGCAATATTCTTCTAGATGCTGAGATGAACCCAAAAATTTCTGATTTTGGCATGGCTAGAATATTCCACAGAGATCAACTACAAGATAAGACGAGCCGAATTGTTGGAACATATGGCTACATGTCACCAGAGTACGCAGTATTTGGAAGATTTTCCATGAAATCTGATGTATTTAGTTTTGGGATCATAATGTTGGAGATTGTAAGTGGCCGGAAAAACAATGATTCTGATTTGGAGGATCCTTCCATGAACTTGATAGGACGTGTTTGGGAGCTCTGGGGAAAAGGCAGAGCCTTAGATATTGTTGATTCCACACTAAAGTCATATCAACCTAATGAAGTCATGAGATGCATACAAGTTGCGCTCTTGTGTGTACAAGAAGATTCAAAGGACCGACCTGCCATGTCAGCCATTGTTTTCATGTTGAGTGGTGAATCATCTCCTCCATTGCCTAAGCATCCAGCATTTGTTTACAGAAGAGATTCCGGCATTGATGTTGATCCATTACTTCCAAACAGATCTTATTCTATAAATGACTTGACAATAACTACAATGGAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

821

Amino Acids

93.18

Weight (kDa)

7.11

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 194 4.9e-35 D-mannose binding lectin
S_locus_glycop PF00954 238 - 318 1.2e-11 S-locus glycoprotein domain
PAN_2 PF08276 342 - 408 6.5e-18 PAN-like domain
Pkinase PF00069 506 - 771 2.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 508 - 773 2.1e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1560
AasI GACNNNNNNGTC 1 cut(s) 1493
Acc36I ACCTGC 1 cut(s) 2305
AccB1I GGYRCC 1 cut(s) 881
AccB7I CCANNNNNTGG 1 cut(s) 108
AccI GTMKAC 1 cut(s) 371
AccII CGCG 1 cut(s) 385
AciI CCGC 4 cut(s) 385, 788, 879, 1155
AclWI GGATC 8 cut(s) 686, 1093, 1634, 1883, 2090, 2132, 2145, 2393
AcoI YGGCCR 2 cut(s) 1534, 2107
AcsI RAATTY 4 cut(s) 193, 216, 1634, 1935
AcuI CTGAAG 3 cut(s) 146, 166, 1599
AfaI GTAC 5 cut(s) 662, 1232, 1368, 2033, 2274
AfeI AGCGCT 1 cut(s) 1811
AfiI CCNNNNNNNGG 2 cut(s) 108, 602
AflII CTTAAG 1 cut(s) 616
AflIII ACRYGT 2 cut(s) 2019, 2161
AgeI ACCGGT 1 cut(s) 204
AhlI ACTAGT 1 cut(s) 328
AjiI CACGTC 1 cut(s) 2162
AjnI CCWGG 6 cut(s) 92, 456, 520, 595, 694, 937
AluBI AGCT 9 cut(s) 56, 201, 427, 1283, 1441, 1570, 1755, 2173, 2459
AluI AGCT 9 cut(s) 56, 201, 427, 1283, 1441, 1570, 1755, 2173, 2459
Alw21I GWGCWC 3 cut(s) 306, 1169, 2175
Alw26I GTCTC 3 cut(s) 902, 1029, 1450
AlwI GGATC 8 cut(s) 686, 1093, 1634, 1883, 2090, 2132, 2145, 2393
Aor51HI AGCGCT 1 cut(s) 1811
AoxI GGCC 3 cut(s) 817, 1534, 2107
ApeKI GCWGC 2 cut(s) 1283, 1499
ApoI RAATTY 4 cut(s) 193, 216, 1634, 1935
ArsI GACNNNNNNTTYG 2 cut(s) 691, 723
AseI ATTAAT 1 cut(s) 780
AsiGI ACCGGT 1 cut(s) 204
Asp700I GAANNNNTTC 3 cut(s) 1144, 2050, 2380
AspLEI GCGC 3 cut(s) 1398, 1812, 2263
AspS9I GGNCC 2 cut(s) 1788, 2290
AsuC2I CCSGG 2 cut(s) 189, 856
AsuHPI GGTGA 4 cut(s) 491, 1847, 2016, 2342
AsuNHI GCTAGC 1 cut(s) 1357
AvaII GGWCC 2 cut(s) 1788, 2290
BaeI ACNNNNGTAYC 2 cut(s) 222, 255
BalI TGGCCA 1 cut(s) 1536
BamHI GGATCC 1 cut(s) 2137
BanI GGYRCC 1 cut(s) 881
BanII GRGCYC 1 cut(s) 2175
BauI CACGAG 2 cut(s) 1518, 1836
Bbv12I GWGCWC 3 cut(s) 306, 1169, 2175
BbvI GCAGC 2 cut(s) 1270, 1511
BccI CCATC 4 cut(s) 128, 290, 1025, 1210
BciT130I CCWGG 6 cut(s) 94, 458, 522, 597, 696, 939
BclI TGATCA 1 cut(s) 496
BcnI CCSGG 2 cut(s) 189, 856
BcoDI GTCTC 3 cut(s) 902, 1029, 1450
BcuI ACTAGT 1 cut(s) 328
BfaI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1733, 1899, 1913, 1956
BfoI RGCGCY 1 cut(s) 1813
BfrI CTTAAG 1 cut(s) 616
BfuAI ACCTGC 1 cut(s) 2305
BglII AGATCT 3 cut(s) 1249, 1888, 2417
BisI GCNGC 2 cut(s) 1284, 1500
BlsI GCNGC 2 cut(s) 1285, 1501
Bme1390I CCNGG 8 cut(s) 94, 189, 458, 522, 597, 696, 856, 939
Bme18I GGWCC 2 cut(s) 1788, 2290
BmgBI CACGTC 1 cut(s) 2162
BmgT120I GGNCC 2 cut(s) 1788, 2290
BmiI GGNNCC 3 cut(s) 113, 883, 2139
BmrFI CCNGG 8 cut(s) 94, 189, 458, 522, 597, 696, 856, 939
BmrI ACTGGG 2 cut(s) 561, 612
BmsI GCATC 4 cut(s) 650, 1906, 2237, 2365
BmtI GCTAGC 1 cut(s) 1361
BmuI ACTGGG 2 cut(s) 561, 612
Bpu10I CCTNAGC 1 cut(s) 2352
BpuEI CTTGAG 1 cut(s) 1849
BpuMI CCSGG 2 cut(s) 189, 856
Bsa29I ATCGAT 1 cut(s) 1079
BsaBI GATNNNNATC 2 cut(s) 969, 2397
BsaJI CCNNGG 6 cut(s) 93, 187, 595, 695, 938, 1537
BsaWI WCCGGW 1 cut(s) 204
BsaXI ACNNNNNCTCC 4 cut(s) 132, 162, 315, 345
Bsc4I CCNNNNNNNGG 2 cut(s) 108, 602
Bse118I RCCGGY 1 cut(s) 204
Bse1I ACTGG 3 cut(s) 556, 607, 869
Bse3DI GCAATG 1 cut(s) 2345
Bse8I GATNNNNATC 2 cut(s) 969, 2397
BseBI CCWGG 6 cut(s) 94, 458, 522, 597, 696, 939
BseCI ATCGAT 1 cut(s) 1079
BseDI CCNNGG 6 cut(s) 93, 187, 595, 695, 938, 1537
BseGI GGATG 9 cut(s) 136, 466, 543, 641, 814, 998, 1728, 1878, 2356
BseJI GATNNNNATC 2 cut(s) 969, 2397
BseLI CCNNNNNNNGG 2 cut(s) 108, 602
BseMI GCAATG 1 cut(s) 2345
BseMII CTCAG 2 cut(s) 242, 1911
BseNI ACTGG 3 cut(s) 556, 607, 869
BseRI GAGGAG 2 cut(s) 1451, 2331
BseXI GCAGC 2 cut(s) 1270, 1511
BsgI GTGCAG 2 cut(s) 405, 828
Bsh1236I CGCG 1 cut(s) 385
Bsh1285I CGRYCG 2 cut(s) 389, 1275
BshFI GGCC 3 cut(s) 819, 1536, 2109
BshNI GGYRCC 1 cut(s) 881
BshTI ACCGGT 1 cut(s) 204
BshVI ATCGAT 1 cut(s) 1079
BsiEI CGRYCG 2 cut(s) 389, 1275
BsiHKAI GWGCWC 3 cut(s) 306, 1169, 2175
BsiSI CCGG 5 cut(s) 189, 205, 856, 2110, 2385
BslFI GGGAC 4 cut(s) 110, 712, 838, 1591
BslI CCNNNNNNNGG 2 cut(s) 108, 602
BsmAI GTCTC 3 cut(s) 902, 1029, 1450
BsmBI CGTCTC 1 cut(s) 1029
BsmFI GGGAC 4 cut(s) 110, 712, 838, 1591
BsmI GAATGC 1 cut(s) 1273
BsnI GGCC 3 cut(s) 819, 1536, 2109
Bsp1286I GDGCHC 3 cut(s) 306, 1169, 2175
Bsp1407I TGTACA 3 cut(s) 660, 1230, 2272
Bsp19I CCATGG 1 cut(s) 1537
BspACI CCGC 4 cut(s) 385, 788, 879, 1155
BspANI GGCC 3 cut(s) 819, 1536, 2109
BspCNI CTCAG 2 cut(s) 241, 1912
BspDI ATCGAT 1 cut(s) 1079
BspFNI CGCG 1 cut(s) 385
BspHI TCATGA 1 cut(s) 2241
BspLI GGNNCC 3 cut(s) 113, 883, 2139
BspMI ACCTGC 1 cut(s) 2305
BspOI GCTAGC 1 cut(s) 1361
BspPI GGATC 8 cut(s) 686, 1093, 1634, 1883, 2090, 2132, 2145, 2393
BspT107I GGYRCC 1 cut(s) 881
BspTI CTTAAG 1 cut(s) 616
BsrDI GCAATG 1 cut(s) 2345
BsrFI RCCGGY 1 cut(s) 204
BsrGI TGTACA 3 cut(s) 660, 1230, 2272
BsrI ACTGG 3 cut(s) 556, 607, 869
BssAI RCCGGY 1 cut(s) 204
BssECI CCNNGG 6 cut(s) 93, 187, 595, 695, 938, 1537
BssNAI GTATAC 1 cut(s) 372
BssSI CACGAG 2 cut(s) 1518, 1836
BssT1I CCWWGG 1 cut(s) 1537
Bst1107I GTATAC 1 cut(s) 372
Bst2BI CACGAG 2 cut(s) 1518, 1836
Bst2UI CCWGG 6 cut(s) 94, 458, 522, 597, 696, 939
Bst4CI ACNGT 5 cut(s) 9, 775, 1276, 1347, 1788
Bst6I CTCTTC 3 cut(s) 71, 80, 2371
BstAFI CTTAAG 1 cut(s) 616
BstAUI TGTACA 3 cut(s) 660, 1230, 2272
BstC8I GCNNGC 3 cut(s) 1332, 1359, 1383
BstDEI CTNAG 5 cut(s) 228, 1136, 1920, 2194, 2352
BstDSI CCRYGG 1 cut(s) 1537
BstF5I GGATG 9 cut(s) 136, 466, 543, 641, 814, 998, 1728, 1878, 2356
BstFNI CGCG 1 cut(s) 385
BstH2I RGCGCY 1 cut(s) 1813
BstHHI GCGC 3 cut(s) 1398, 1812, 2263
BstMAI GTCTC 3 cut(s) 902, 1029, 1450
BstMCI CGRYCG 2 cut(s) 389, 1275
BstMWI GCNNNNNNNGC 4 cut(s) 1289, 1358, 1658, 2306
BstNI CCWGG 6 cut(s) 94, 458, 522, 597, 696, 939
BstNSI RCATGY 3 cut(s) 1389, 1744, 2023
BstSCI CCNGG 8 cut(s) 92, 187, 456, 520, 595, 694, 854, 937
BstUI CGCG 1 cut(s) 385
BstV1I GCAGC 2 cut(s) 1270, 1511
BstX2I RGATCY 4 cut(s) 1249, 1888, 2137, 2417
BstYI RGATCY 4 cut(s) 1249, 1888, 2137, 2417
BstZ17I GTATAC 1 cut(s) 372
Bsu15I ATCGAT 1 cut(s) 1079
BsuRI GGCC 3 cut(s) 819, 1536, 2109
BsuTUI ATCGAT 1 cut(s) 1079
BtgI CCRYGG 1 cut(s) 1537
BtrI CACGTC 1 cut(s) 2162
BtsCI GGATG 9 cut(s) 136, 466, 543, 641, 814, 998, 1728, 1878, 2356
BtsIMutI CAGTG 3 cut(s) 5, 780, 1167
BveI ACCTGC 1 cut(s) 2305
Cac8I GCNNGC 3 cut(s) 1332, 1359, 1383
CciI TCATGA 1 cut(s) 2241
CfoI GCGC 3 cut(s) 1398, 1812, 2263
Cfr10I RCCGGY 1 cut(s) 204
Cfr13I GGNCC 2 cut(s) 1788, 2290
ClaI ATCGAT 1 cut(s) 1079
Csp6I GTAC 5 cut(s) 661, 1231, 1367, 2032, 2273
CspAI ACCGGT 1 cut(s) 204
CviQI GTAC 5 cut(s) 661, 1231, 1367, 2032, 2273
DdeI CTNAG 5 cut(s) 228, 1136, 1920, 2194, 2352
DrdI GACNNNNNNGTC 1 cut(s) 1493
DseDI GACNNNNNNGTC 1 cut(s) 1493
EaeI YGGCCR 2 cut(s) 1534, 2107
Eam1104I CTCTTC 3 cut(s) 71, 80, 2371
EarI CTCTTC 3 cut(s) 71, 80, 2371
Ecl136II GAGCTC 1 cut(s) 2173
Eco130I CCWWGG 1 cut(s) 1537
Eco24I GRGCYC 1 cut(s) 2175
Eco47I GGWCC 2 cut(s) 1788, 2290
Eco47III AGCGCT 1 cut(s) 1811
Eco53kI GAGCTC 1 cut(s) 2173
Eco57I CTGAAG 3 cut(s) 146, 166, 1599
EcoICRI GAGCTC 1 cut(s) 2173
EcoRI GAATTC 1 cut(s) 1634
EcoRII CCWGG 6 cut(s) 92, 456, 520, 595, 694, 937
EcoT14I CCWWGG 1 cut(s) 1537
EcoT22I ATGCAT 1 cut(s) 2252
EcoT38I GRGCYC 1 cut(s) 2175
ErhI CCWWGG 1 cut(s) 1537
Esp3I CGTCTC 1 cut(s) 1029
FalI AAGNNNNNCTT 6 cut(s) 45, 77, 821, 853, 1638, 1670
FaqI GGGAC 4 cut(s) 110, 712, 838, 1591
FauNDI CATATG 1 cut(s) 2011
FbaI TGATCA 1 cut(s) 496
FblI GTMKAC 1 cut(s) 371
Fnu4HI GCNGC 2 cut(s) 1284, 1500
FokI GGATG 9 cut(s) 143, 473, 550, 628, 821, 1005, 1735, 1865, 2343
FriOI GRGCYC 1 cut(s) 2175
Fsp4HI GCNGC 2 cut(s) 1284, 1500
FspBI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1733, 1899, 1913, 1956
GlaI GCGC 3 cut(s) 1397, 1811, 2262
GluI GCNGC 2 cut(s) 1284, 1500
HaeII RGCGCY 1 cut(s) 1813
HaeIII GGCC 3 cut(s) 819, 1536, 2109
HapII CCGG 5 cut(s) 189, 205, 856, 2110, 2385
HhaI GCGC 3 cut(s) 1398, 1812, 2263
Hin6I GCGC 3 cut(s) 1396, 1810, 2261
HinP1I GCGC 3 cut(s) 1396, 1810, 2261
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 1 cut(s) 1753
HpaI GTTAAC 1 cut(s) 403
HpaII CCGG 5 cut(s) 189, 205, 856, 2110, 2385
HphI GGTGA 4 cut(s) 491, 1847, 2016, 2342
Hpy166II GTNNAC 6 cut(s) 372, 403, 935, 1233, 2273, 2371
Hpy188I TCNGA 8 cut(s) 80, 231, 636, 1303, 1893, 1942, 2065, 2128
Hpy188III TCNNGA 7 cut(s) 722, 1070, 1484, 1617, 1866, 1913, 2242
Hpy8I GTNNAC 6 cut(s) 372, 403, 935, 1233, 2273, 2371
HpyAV CCTTC 9 cut(s) 121, 788, 823, 830, 1042, 1172, 1298, 1801, 2151
HpyCH4III ACNGT 5 cut(s) 9, 775, 1276, 1347, 1788
HpyCH4IV ACGT 2 cut(s) 1257, 2161
HpyF10VI GCNNNNNNNGC 4 cut(s) 1289, 1358, 1658, 2306
HpyF3I CTNAG 5 cut(s) 228, 1136, 1920, 2194, 2352
HpySE526I ACGT 2 cut(s) 1257, 2161
HspAI GCGC 3 cut(s) 1396, 1810, 2261
Ksp22I TGATCA 1 cut(s) 496
KspAI GTTAAC 1 cut(s) 403
LmnI GCTCC 2 cut(s) 1438, 2170
Lsp1109I GCAGC 2 cut(s) 1270, 1511
LweI GCATC 4 cut(s) 650, 1906, 2237, 2365
MaeI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1733, 1899, 1913, 1956
MaeII ACGT 2 cut(s) 1257, 2161
MaeIII GTNAC 5 cut(s) 582, 712, 746, 860, 2022
MflI RGATCY 4 cut(s) 1249, 1888, 2137, 2417
MhlI GDGCHC 3 cut(s) 306, 1169, 2175
MlsI TGGCCA 1 cut(s) 1536
MluNI TGGCCA 1 cut(s) 1536
MlyI GAGTC 1 cut(s) 1856
MmeI TCCRAC 3 cut(s) 193, 1984, 2073
MnlI CCTC 8 cut(s) 304, 718, 1314, 1423, 1429, 1866, 2128, 2352
Mox20I TGGCCA 1 cut(s) 1536
Mph1103I ATGCAT 1 cut(s) 2252
MroXI GAANNNNTTC 3 cut(s) 1144, 2050, 2380
MscI TGGCCA 1 cut(s) 1536
MseI TTAA 7 cut(s) 402, 515, 569, 617, 780, 1062, 1224
MslI CAYNNNNRTG 3 cut(s) 978, 1226, 1390
Msp20I TGGCCA 1 cut(s) 1536
MspCI CTTAAG 1 cut(s) 616
MspI CCGG 5 cut(s) 189, 205, 856, 2110, 2385
MspR9I CCNGG 8 cut(s) 94, 189, 458, 522, 597, 696, 856, 939
Mva1269I GAATGC 1 cut(s) 1273
MvaI CCWGG 6 cut(s) 94, 458, 522, 597, 696, 939
MvnI CGCG 1 cut(s) 385
MwoI GCNNNNNNNGC 4 cut(s) 1289, 1358, 1658, 2306
NciI CCSGG 2 cut(s) 189, 856
NcoI CCATGG 1 cut(s) 1537
NdeI CATATG 1 cut(s) 2011
NheI GCTAGC 1 cut(s) 1357
NlaIV GGNNCC 3 cut(s) 113, 883, 2139
NmuCI GTSAC 4 cut(s) 582, 712, 860, 2022
NsiI ATGCAT 1 cut(s) 2252
NspI RCATGY 3 cut(s) 1389, 1744, 2023
PagI TCATGA 1 cut(s) 2241
PciI ACATGT 1 cut(s) 2019
PctI GAATGC 1 cut(s) 1273
PdmI GAANNNNTTC 3 cut(s) 1144, 2050, 2380
PfeI GAWTC 9 cut(s) 89, 970, 1678, 1843, 2123, 2207, 2282, 2333, 2381
PflMI CCANNNNNTGG 1 cut(s) 108
PfoI TCCNGGA 1 cut(s) 456
PinAI ACCGGT 1 cut(s) 204
PkrI GCNGC 2 cut(s) 1285, 1501
PleI GAGTC 1 cut(s) 1856
PpsI GAGTC 1 cut(s) 1856
PscI ACATGT 1 cut(s) 2019
PshBI ATTAAT 1 cut(s) 780
PsiI TTATAA 1 cut(s) 1560
Psp124BI GAGCTC 1 cut(s) 2175
Psp6I CCWGG 6 cut(s) 92, 456, 520, 595, 694, 937
PspGI CCWGG 6 cut(s) 92, 456, 520, 595, 694, 937
PspN4I GGNNCC 3 cut(s) 113, 883, 2139
PspPI GGNCC 2 cut(s) 1788, 2290
PsuI RGATCY 4 cut(s) 1249, 1888, 2137, 2417
RsaI GTAC 5 cut(s) 662, 1232, 1368, 2033, 2274
RsaNI GTAC 5 cut(s) 661, 1231, 1367, 2032, 2273
RseI CAYNNNNRTG 3 cut(s) 978, 1226, 1390
SacI GAGCTC 1 cut(s) 2175
SaqAI TTAA 7 cut(s) 402, 515, 569, 617, 780, 1062, 1224
SatI GCNGC 2 cut(s) 1284, 1500
Sau96I GGNCC 2 cut(s) 1788, 2290
SchI GAGTC 1 cut(s) 1856
ScrFI CCNGG 8 cut(s) 94, 189, 458, 522, 597, 696, 856, 939
SduI GDGCHC 3 cut(s) 306, 1169, 2175
SfaNI GCATC 4 cut(s) 650, 1906, 2237, 2365
SinI GGWCC 2 cut(s) 1788, 2290
SmiMI CAYNNNNRTG 3 cut(s) 978, 1226, 1390
SmlI CTYRAG 2 cut(s) 616, 1864
SmoI CTYRAG 2 cut(s) 616, 1864
SpeI ACTAGT 1 cut(s) 328
SsiI CCGC 4 cut(s) 385, 788, 879, 1155
SspI AATATT 2 cut(s) 1906, 1962
SspMI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1733, 1899, 1913, 1956
SstI GAGCTC 1 cut(s) 2175
StyD4I CCNGG 8 cut(s) 92, 187, 456, 520, 595, 694, 854, 937
StyI CCWWGG 1 cut(s) 1537
TaaI ACNGT 5 cut(s) 9, 775, 1276, 1347, 1788
TaiI ACGT 2 cut(s) 1260, 2164
TaqI TCGA 6 cut(s) 671, 1006, 1079, 1479, 1629, 2461
TaqII GACCGA 1 cut(s) 2307
TatI WGTACW 3 cut(s) 660, 1230, 2272
TfiI GAWTC 9 cut(s) 89, 970, 1678, 1843, 2123, 2207, 2282, 2333, 2381
Tru1I TTAA 7 cut(s) 402, 515, 569, 617, 780, 1062, 1224
Tru9I TTAA 7 cut(s) 402, 515, 569, 617, 780, 1062, 1224
TscAI CASTG 3 cut(s) 12, 780, 1174
TseFI GTSAC 4 cut(s) 582, 712, 860, 2022
TseI GCWGC 2 cut(s) 1283, 1499
Tsp45I GTSAC 4 cut(s) 582, 712, 860, 2022
TspRI CASTG 3 cut(s) 12, 780, 1174
Van91I CCANNNNNTGG 1 cut(s) 108
Vha464I CTTAAG 1 cut(s) 616
VpaK11BI GGWCC 2 cut(s) 1788, 2290
VspI ATTAAT 1 cut(s) 780
XapI RAATTY 4 cut(s) 193, 216, 1634, 1935
XbaI TCTAGA 1 cut(s) 1912
XceI RCATGY 3 cut(s) 1389, 1744, 2023
XcmI CCANNNNNNNNNTGG 1 cut(s) 1544
XmiI GTMKAC 1 cut(s) 371
XmnI GAANNNNTTC 3 cut(s) 1144, 2050, 2380
XspI CTAG 9 cut(s) 198, 234, 329, 446, 1358, 1733, 1899, 1913, 1956
Zsp2I ATGCAT 1 cut(s) 2252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.