Rw7G030910

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
43917547 .. 43941034
23488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G030910.1

Sequence Viewer

Length: 3456 bp
ATGCCACTGTTTCACATCTGGAACGTTGCTAACCCCCAGAAAATAGTTTTAAAAGCTCTGCTTCTCTTCCTCCTCTTTCAGTTCTGCACTTCCAGGGACACCATAAAAGGGAATGAAGAACAATTGGAGGATGTTGATGGAGACAATTTAGTGTCCAAAGAAAGCAAGTTTGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCTACCGCTATGTTGGAATCTGGTATTCTCAGACTAGAGTATCTGATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCTATCAATGATACCTCTGGTGTGCTCACAATAAACAGGTATGGAGAACTAGTCCTTTATGCTCATAACATGGAGAGCACTCCTATTTGGTCTACTTATGTGTCGCGGTCTGTTCAAAATGTTAACACAAGCACTTCATCTGCACAGCTTTTAGATACAGGAAATTTAGTTGTGTTCCAGGATGATAAAAATGAAATCTTTATATGGCAAAGTTTTGATCATCCTATAGATACTTTAATTCCAGGTATGAAAGTTGGGGTGAATTGGAAAACTGGGCTAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTATACCTATAGGCTAAGTTCAGATCATAATGCATTTCCCCAATTTTTTATGTATAAAGGTTTGAGTAAGTATTGGCGAAGTGATCCAGGCCCAGCGCCTACTTTGGTCACTAATCAAGATGAAACTTATTATTTCATGAATGAAACCAATGCAATTACAAGAATAACAGTGACTGATCCTGCCTTAGAGCGGCTTACGTGGGATAATGGTGGCCTTCAATGGAAGGAAGAATTCTCTGCACCGAAGTCCCGGTGTGACAGGTATGGACAGTGTGGTGCCAACAGCAGATGTAGCCCTGACAATGTTAATCTGTTTGAGTATCAATGTAATTCGATCATTACCCTTCCAACTCTGAAAATCAGAAACTTGCCACTGTTTCACACCTACAAAGTTGCTAATGCCAAGAAAATGTTATTCAAAGCTCTGCTTCTCTTCCTCCTCTTCCGATTTTGCGAATCCAGGGACACCATAACACGGAACCAAGAACAACTGAAGGATGATGGTGGAGTTTTAGTGTCCAAACAGAGCAAGTTCGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCAACCGGTATGTTGGAATTTGGTATTCTCAGACTAGAGTATCTAATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCCATAAATGATACCTCTGGTGTGCTCAAAATAAACAGGTATGGAGAACTAGTCCTTTATGCTTATAACATGGAGAGCACTCCTATTTGGTCTACTAATGTGTCGCGGTCGGTTCAAAATGTTAACACAAGCACTTTATCTGCACAGCTTTTAGATACAGGAAATCTAGTTGTGTTCCAGGATGATAATAATGAAAACCTTTCATGGCAAAGTTTTGATCATCCCACAGATACTTTAATTCCAGGTATGAAAGTTGGGGTGAATTGGAAAACTGGGCAAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGCAATTGGGGACTATACCTTAAGGCTCTATCCAAATCAGATTGCATCCCCCGAAATTTTTCTGTACAAGGGTTTGAGTAAGTATTGGCGAAGTCCAGGGCCATCACCTAGTCTGGTCACTAATCAAGAGGAAACTTATTATCTCATGGATGACACCAATGCAATTACAAGAGCAACCGTGACGGATTCTGCGCACGAGCACTTTACATGGGATGATGGTGGCCTTCAATGGAAGGAAGACTACTCTGAACCGAAGTCCCTGTGTGACTGGTATGGACAGTGTGGTGCCAACAGCAAATGTAGCCCTGACAACATTAATGCTATGCTGTTTTGGTGTGATTGTTTACCAGGGTATGTGCCTAATTCTATAAGTGATTGGAATCAGAAAAATGGGTCAGGTGGATGTGTGAGTAATCGACTTGGTTTGTTGAAGTGTGGTGATGGAGACGGGTTTGTGAAGGTGGCAAGAGTTAAATATCCAGACACATCGATAGCAGCATCGTTAAAATCAGGAATGAATGACAAAGAGTGTGAGCAGGAGTGCCTAAGAAATTGTTCTTGCACTGCATATTTGAGCACTGAAAATGAAGGGACTGTTGATTGCTTGACATGGTATGATGACTTGATGGACATTTTAGTGTACACAGTGCTTGGACGAGATCTCTACGTTCGTGTGAATGCAACTGTGTTAGCGGAAAATGGCATAAGATCAGAAGGTTTCTTGGAAAGGAGGGGTATGATGGCTATTCCAATACTGTCTTCTGTGCTAGCATTGGTACTAATCATTACGCTTGCAAGTTGGTGGCGTAAGAAGAACAGGAACACAAAAGGCATATACTTTGTGGAGGCAGAGGAGCTTGTGGAAACCCAGATACACCCTGAATTGCAATTTTTTGATCTTGACACAATAACAGCAGCCACAGAGCACTTCTCTCGTGTCAATGAACTTGGCCATGGTGGTTTTGGCTCTGTTTATAAGGGTCAGCTACCAAATGAACAGAAAGTTGCTGTGAAAAGATTGTCCAAAACTTCAGGACAAGGGATCGAAGAATTCAAAAATGAAGTTTTACTTATAGCAAGACTTCAACACAGGAATCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTGCTAGAATACATGCCTAATAAAAGCTTAAACTCCTTTCTTTTCGATGACACAAGACGGTCCTTCTTGGATTGGGAAAAGCGCTTTGAAATTATCAACGGGATTGCTCGTGGGATTTTGTATCTTCACCAAGACTCAAGATTGAGGATCATCCATAGAGATCTGAAAACTAGTAATATTCTTCTAGATGCTGAGATGAACCCAAGAATTTCTGATTTTGGCATGGCTAGAATATTCCATGGAGACCAATTGCAAGATAAGACAAGGCGAATTGTTGGAACATATGGCTACATGTCACCAGAGTATGCAATATTTGGGAGATTTTCAACGAAATCTGATGTATTTAGTTTTGGGATCATAATGTTGGAGATTGTAAGCGGCCGGAAAAACAATGGTTCTGAACCAGAGGATCCTTCCATGAACTTGATAGGACGTGTTTGGAAGCTCTGGGGAGAAGGCAGGGCCTTAGATATTGTTGATTCGACACTGAAGTCATATCAGCCTAATGAAGTCATGAGATGCATACAAGTTGCGCTCTTGTGTGTACAAGAAGATTCAAAGGACCGACCTGCCATGTCAGCCATTGTTTTCATGTTGAGTGGTGAAGCATCTCCTCCAGTGCCTAAGCATCCGGCATTTGTTTACAGAAGAGATTCCGACCCTGATGTTGATCCATTACATGCAAACGGAACGGATTCTATAAATGATTTGACAATAACTACAATGAAAGCTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1151

Amino Acids

130.62

Weight (kDa)

5.65

Isoelectric Point (pI)

34.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 195 9.5e-36 D-mannose binding lectin
S_locus_glycop PF00954 242 - 305 7.8e-09 S-locus glycoprotein domain
B_lectin PF01453 410 - 520 6.5e-36 D-mannose binding lectin
S_locus_glycop PF00954 570 - 646 3e-11 S-locus glycoprotein domain
PAN_2 PF08276 670 - 736 4.5e-18 PAN-like domain
Pkinase PF00069 836 - 1101 2.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 838 - 1103 1.2e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1323, 2550
AasI GACNNNNNNGTC 1 cut(s) 3208
Acc16I TGCGCA 1 cut(s) 1767
Acc36I ACCTGC 1 cut(s) 3295
AccB1I GGYRCC 2 cut(s) 887, 1859
AccBSI CCGCTC 1 cut(s) 802
AccI GTMKAC 2 cut(s) 374, 1349
AccII CGCG 2 cut(s) 388, 1363
AciI CCGC 6 cut(s) 208, 388, 802, 1363, 2267, 3096
AclI AACGTT 1 cut(s) 24
AclWI GGATC 8 cut(s) 689, 782, 2624, 2873, 3080, 3122, 3135, 3383
AcoI YGGCCR 2 cut(s) 2524, 3097
AcsI RAATTY 8 cut(s) 196, 445, 842, 1171, 1194, 1629, 2624, 2925
AcuI CTGAAG 5 cut(s) 169, 1124, 1144, 2589, 3227
AfaI GTAC 4 cut(s) 1640, 2216, 2352, 3264
AfeI AGCGCT 1 cut(s) 2801
AfiI CCNNNNNNNGG 5 cut(s) 108, 605, 801, 1086, 1580
AflII CTTAAG 1 cut(s) 1594
AflIII ACRYGT 2 cut(s) 3009, 3151
AgeI ACCGGT 1 cut(s) 1182
AhlI ACTAGT 3 cut(s) 331, 1306, 2888
AjiI CACGTC 1 cut(s) 3152
AjuI GAANNNNNNNTTGG 2 cut(s) 2317, 2349
Alw21I GWGCWC 7 cut(s) 309, 362, 1284, 1337, 1776, 2153, 2502
Alw26I GTCTC 3 cut(s) 135, 2013, 2955
AlwI GGATC 8 cut(s) 689, 782, 2624, 2873, 3080, 3122, 3135, 3383
AlwNI CAGNNNCTG 1 cut(s) 785
Aor51HI AGCGCT 1 cut(s) 2801
AoxI GGCC 7 cut(s) 700, 823, 1673, 1795, 2524, 3097, 3180
ApeKI GCWGC 2 cut(s) 2069, 2489
ApoI RAATTY 8 cut(s) 196, 445, 842, 1171, 1194, 1629, 2624, 2925
AseI ATTAAT 1 cut(s) 1890
AsiGI ACCGGT 1 cut(s) 1182
Asp700I GAANNNNTTC 4 cut(s) 1632, 2128, 3370, 3412
AspLEI GCGC 4 cut(s) 709, 1768, 2802, 3253
AspS9I GGNCC 5 cut(s) 701, 1673, 2778, 3180, 3280
AsuC2I CCSGG 3 cut(s) 192, 862, 1167
AsuHPI GGTGA 7 cut(s) 553, 1528, 1671, 2024, 2837, 3006, 3332
AsuII TTCGAA 1 cut(s) 1146
AsuNHI GCTAGC 1 cut(s) 2341
AvaII GGWCC 2 cut(s) 2778, 3280
BaeI ACNNNNGTAYC 4 cut(s) 225, 258, 1200, 1233
BalI TGGCCA 1 cut(s) 2526
BamHI GGATCC 1 cut(s) 3127
BanI GGYRCC 2 cut(s) 887, 1859
BarI GAAGNNNNNNTAC 2 cut(s) 1799, 1831
BauI CACGAG 3 cut(s) 1769, 2508, 2826
BbsI GAAGAC 2 cut(s) 1818, 2325
Bbv12I GWGCWC 7 cut(s) 309, 362, 1284, 1337, 1776, 2153, 2502
BbvI GCAGC 2 cut(s) 2081, 2501
BccI CCATC 7 cut(s) 131, 1106, 1684, 1784, 2009, 2194, 2308
BcgI CGANNNNNNTGC 2 cut(s) 2489, 2523
BclI TGATCA 2 cut(s) 499, 1474
BcnI CCSGG 3 cut(s) 192, 862, 1167
BcoDI GTCTC 3 cut(s) 135, 2013, 2955
BcuI ACTAGT 3 cut(s) 331, 1306, 2888
BfmI CTRYAG 2 cut(s) 507, 619
BfoI RGCGCY 2 cut(s) 710, 2803
BfrI CTTAAG 1 cut(s) 1594
BfuAI ACCTGC 1 cut(s) 3295
BglII AGATCT 2 cut(s) 2233, 2878
BisI GCNGC 4 cut(s) 803, 2070, 2490, 3097
BlsI GCNGC 4 cut(s) 804, 2071, 2491, 3098
Bme18I GGWCC 2 cut(s) 2778, 3280
BmgBI CACGTC 1 cut(s) 3152
BmgT120I GGNCC 5 cut(s) 701, 1673, 2778, 3180, 3280
BmiI GGNNCC 4 cut(s) 889, 1091, 1861, 3129
BmrI ACTGGG 3 cut(s) 564, 615, 1539
BmsI GCATC 6 cut(s) 1628, 2081, 2896, 3227, 3335, 3355
BmtI GCTAGC 1 cut(s) 2345
BmuI ACTGGG 3 cut(s) 564, 615, 1539
BpiI GAAGAC 2 cut(s) 1818, 2325
BplI GAGNNNNNCTC 2 cut(s) 2489, 2521
BpmI CTGGAG 1 cut(s) 3318
Bpu10I CCTNAGC 1 cut(s) 3342
Bpu14I TTCGAA 1 cut(s) 1146
BpuEI CTTGAG 1 cut(s) 2839
BpuMI CCSGG 3 cut(s) 192, 862, 1167
Bsa29I ATCGAT 1 cut(s) 2063
BsaAI YACGTR 1 cut(s) 810
BsaBI GATNNNNATC 2 cut(s) 1953, 3387
BsaI GGTCTC 1 cut(s) 2955
BsaJI CCNNGG 9 cut(s) 93, 190, 598, 1071, 1165, 1670, 1922, 2527, 2956
BsaWI WCCGGW 1 cut(s) 1182
BsaXI ACNNNNNCTCC 6 cut(s) 318, 348, 1110, 1140, 1293, 1323
Bsc4I CCNNNNNNNGG 5 cut(s) 108, 605, 801, 1086, 1580
Bse118I RCCGGY 1 cut(s) 1182
Bse1I ACTGG 5 cut(s) 559, 610, 1534, 1847, 3335
Bse8I GATNNNNATC 2 cut(s) 1953, 3387
BseCI ATCGAT 1 cut(s) 2063
BseDI CCNNGG 9 cut(s) 93, 190, 598, 1071, 1165, 1670, 1922, 2527, 2956
BseJI GATNNNNATC 2 cut(s) 1953, 3387
BseLI CCNNNNNNNGG 5 cut(s) 108, 605, 801, 1086, 1580
BseMII CTCAG 3 cut(s) 245, 1220, 2901
BseNI ACTGG 5 cut(s) 559, 610, 1534, 1847, 3335
BseRI GAGGAG 4 cut(s) 62, 1040, 2441, 3321
BseX3I CGGCCG 1 cut(s) 3097
BseXI GCAGC 2 cut(s) 2081, 2501
BseYI CCCAGC 1 cut(s) 703
BsgI GTGCAG 4 cut(s) 70, 408, 834, 1383
Bsh1236I CGCG 2 cut(s) 388, 1363
Bsh1285I CGRYCG 2 cut(s) 1367, 3100
BshFI GGCC 7 cut(s) 702, 825, 1675, 1797, 2526, 3099, 3182
BshNI GGYRCC 2 cut(s) 887, 1859
BshTI ACCGGT 1 cut(s) 1182
BshVI ATCGAT 1 cut(s) 2063
BsiEI CGRYCG 2 cut(s) 1367, 3100
BsiHKAI GWGCWC 7 cut(s) 309, 362, 1284, 1337, 1776, 2153, 2502
BsiSI CCGG 6 cut(s) 192, 862, 1167, 1183, 3100, 3350
BslFI GGGAC 7 cut(s) 110, 623, 844, 1088, 1598, 1816, 2179
BslI CCNNNNNNNGG 5 cut(s) 108, 605, 801, 1086, 1580
BsmAI GTCTC 3 cut(s) 135, 2013, 2955
BsmBI CGTCTC 1 cut(s) 2013
BsmFI GGGAC 7 cut(s) 110, 623, 844, 1088, 1598, 1816, 2179
BsmI GAATGC 1 cut(s) 2257
BsnI GGCC 7 cut(s) 702, 825, 1675, 1797, 2526, 3099, 3182
Bso31I GGTCTC 1 cut(s) 2955
Bsp119I TTCGAA 1 cut(s) 1146
Bsp1286I GDGCHC 7 cut(s) 309, 362, 1284, 1337, 1776, 2153, 2502
Bsp1407I TGTACA 3 cut(s) 1638, 2214, 3262
Bsp19I CCATGG 2 cut(s) 2527, 2956
BspACI CCGC 6 cut(s) 208, 388, 802, 1363, 2267, 3096
BspANI GGCC 7 cut(s) 702, 825, 1675, 1797, 2526, 3099, 3182
BspCNI CTCAG 3 cut(s) 244, 1219, 2902
BspDI ATCGAT 1 cut(s) 2063
BspFNI CGCG 2 cut(s) 388, 1363
BspHI TCATGA 2 cut(s) 747, 3231
BspLI GGNNCC 4 cut(s) 889, 1091, 1861, 3129
BspMI ACCTGC 1 cut(s) 3295
BspOI GCTAGC 1 cut(s) 2345
BspPI GGATC 8 cut(s) 689, 782, 2624, 2873, 3080, 3122, 3135, 3383
BspT104I TTCGAA 1 cut(s) 1146
BspT107I GGYRCC 2 cut(s) 887, 1859
BspTI CTTAAG 1 cut(s) 1594
BspTNI GGTCTC 1 cut(s) 2955
BsrBI CCGCTC 1 cut(s) 802
BsrFI RCCGGY 1 cut(s) 1182
BsrGI TGTACA 3 cut(s) 1638, 2214, 3262
BsrI ACTGG 5 cut(s) 559, 610, 1534, 1847, 3335
BssAI RCCGGY 1 cut(s) 1182
BssECI CCNNGG 9 cut(s) 93, 190, 598, 1071, 1165, 1670, 1922, 2527, 2956
BssSI CACGAG 3 cut(s) 1769, 2508, 2826
BssT1I CCWWGG 2 cut(s) 2527, 2956
Bst2BI CACGAG 3 cut(s) 1769, 2508, 2826
Bst6I CTCTTC 4 cut(s) 71, 1049, 1058, 3361
BstAFI CTTAAG 1 cut(s) 1594
BstAUI TGTACA 3 cut(s) 1638, 2214, 3262
BstBAI YACGTR 1 cut(s) 810
BstBI TTCGAA 1 cut(s) 1146
BstC8I GCNNGC 2 cut(s) 2343, 2367
BstDEI CTNAG 8 cut(s) 231, 626, 796, 1206, 2120, 2910, 3184, 3342
BstDSI CCRYGG 2 cut(s) 2527, 2956
BstFNI CGCG 2 cut(s) 388, 1363
BstH2I RGCGCY 2 cut(s) 710, 2803
BstHHI GCGC 4 cut(s) 709, 1768, 2802, 3253
BstMAI GTCTC 3 cut(s) 135, 2013, 2955
BstMCI CGRYCG 2 cut(s) 1367, 3100
BstMWI GCNNNNNNNGC 3 cut(s) 903, 1875, 3296
BstNSI RCATGY 3 cut(s) 2734, 3013, 3401
BstSFI CTRYAG 2 cut(s) 507, 619
BstUI CGCG 2 cut(s) 388, 1363
BstV1I GCAGC 2 cut(s) 2081, 2501
BstV2I GAAGAC 2 cut(s) 1818, 2325
BstX2I RGATCY 3 cut(s) 2233, 2878, 3127
BstYI RGATCY 3 cut(s) 2233, 2878, 3127
BstZI CGGCCG 1 cut(s) 3097
Bsu15I ATCGAT 1 cut(s) 2063
BsuRI GGCC 7 cut(s) 702, 825, 1675, 1797, 2526, 3099, 3182
BsuTUI ATCGAT 1 cut(s) 2063
BtgI CCRYGG 2 cut(s) 2527, 2956
BtrI CACGTC 1 cut(s) 3152
BtsI GCAGTG 1 cut(s) 2136
BveI ACCTGC 1 cut(s) 3295
Cac8I GCNNGC 2 cut(s) 2343, 2367
CaiI CAGNNNCTG 1 cut(s) 785
CciI TCATGA 2 cut(s) 747, 3231
CfoI GCGC 4 cut(s) 709, 1768, 2802, 3253
Cfr10I RCCGGY 1 cut(s) 1182
Cfr13I GGNCC 5 cut(s) 701, 1673, 2778, 3180, 3280
ClaI ATCGAT 1 cut(s) 2063
Csp6I GTAC 4 cut(s) 1639, 2215, 2351, 3263
CspAI ACCGGT 1 cut(s) 1182
CviQI GTAC 4 cut(s) 1639, 2215, 2351, 3263
DdeI CTNAG 8 cut(s) 231, 626, 796, 1206, 2120, 2910, 3184, 3342
DraI TTTAAA 1 cut(s) 51
DrdI GACNNNNNNGTC 1 cut(s) 3208
DseDI GACNNNNNNGTC 1 cut(s) 3208
EaeI YGGCCR 2 cut(s) 2524, 3097
EagI CGGCCG 1 cut(s) 3097
Eam1104I CTCTTC 4 cut(s) 71, 1049, 1058, 3361
EarI CTCTTC 4 cut(s) 71, 1049, 1058, 3361
EclXI CGGCCG 1 cut(s) 3097
Eco130I CCWWGG 2 cut(s) 2527, 2956
Eco31I GGTCTC 1 cut(s) 2955
Eco47I GGWCC 2 cut(s) 2778, 3280
Eco47III AGCGCT 1 cut(s) 2801
Eco52I CGGCCG 1 cut(s) 3097
Eco57I CTGAAG 5 cut(s) 169, 1124, 1144, 2589, 3227
EcoO109I RGGNCCY 1 cut(s) 3180
EcoRI GAATTC 2 cut(s) 842, 2624
EcoT14I CCWWGG 2 cut(s) 2527, 2956
EcoT22I ATGCAT 2 cut(s) 646, 3242
ErhI CCWWGG 2 cut(s) 2527, 2956
Esp3I CGTCTC 1 cut(s) 2013
FalI AAGNNNNNCTT 6 cut(s) 45, 77, 1023, 1055, 2628, 2660
FaqI GGGAC 7 cut(s) 110, 623, 844, 1088, 1598, 1816, 2179
FauNDI CATATG 1 cut(s) 3001
FbaI TGATCA 2 cut(s) 499, 1474
FblI GTMKAC 2 cut(s) 374, 1349
Fnu4HI GCNGC 4 cut(s) 803, 2070, 2490, 3097
Fsp4HI GCNGC 4 cut(s) 803, 2070, 2490, 3097
FspI TGCGCA 1 cut(s) 1767
GlaI GCGC 4 cut(s) 708, 1767, 2801, 3252
GluI GCNGC 4 cut(s) 803, 2070, 2490, 3097
GsaI CCCAGC 1 cut(s) 707
GsuI CTGGAG 1 cut(s) 3318
HaeII RGCGCY 2 cut(s) 710, 2803
HaeIII GGCC 7 cut(s) 702, 825, 1675, 1797, 2526, 3099, 3182
HapII CCGG 6 cut(s) 192, 862, 1167, 1183, 3100, 3350
HhaI GCGC 4 cut(s) 709, 1768, 2802, 3253
Hin6I GCGC 4 cut(s) 707, 1766, 2800, 3251
HinP1I GCGC 4 cut(s) 707, 1766, 2800, 3251
HincII GTYRAC 2 cut(s) 406, 1381
HindII GTYRAC 2 cut(s) 406, 1381
HindIII AAGCTT 1 cut(s) 2743
HpaI GTTAAC 2 cut(s) 406, 1381
HpaII CCGG 6 cut(s) 192, 862, 1167, 1183, 3100, 3350
HphI GGTGA 7 cut(s) 553, 1528, 1671, 2024, 2837, 3006, 3332
Hpy166II GTNNAC 9 cut(s) 375, 406, 1350, 1381, 1919, 2215, 2217, 3263, 3361
Hpy8I GTNNAC 9 cut(s) 375, 406, 1350, 1381, 1919, 2215, 2217, 3263, 3361
HpyCH4IV ACGT 4 cut(s) 24, 809, 2241, 3151
HpyF10VI GCNNNNNNNGC 3 cut(s) 903, 1875, 3296
HpyF3I CTNAG 8 cut(s) 231, 626, 796, 1206, 2120, 2910, 3184, 3342
HpySE526I ACGT 4 cut(s) 24, 809, 2241, 3151
HspAI GCGC 4 cut(s) 707, 1766, 2800, 3251
Ksp22I TGATCA 2 cut(s) 499, 1474
KspAI GTTAAC 2 cut(s) 406, 1381
LmnI GCTCC 1 cut(s) 2428
Lsp1109I GCAGC 2 cut(s) 2081, 2501
LweI GCATC 6 cut(s) 1628, 2081, 2896, 3227, 3335, 3355
MaeII ACGT 4 cut(s) 24, 809, 2241, 3151
MaeIII GTNAC 9 cut(s) 585, 718, 781, 866, 1560, 1690, 1753, 1838, 3012
MbiI CCGCTC 1 cut(s) 802
MfeI CAATTG 3 cut(s) 122, 1578, 2966
MflI RGATCY 3 cut(s) 2233, 2878, 3127
MhlI GDGCHC 7 cut(s) 309, 362, 1284, 1337, 1776, 2153, 2502
MlsI TGGCCA 1 cut(s) 2526
MluNI TGGCCA 1 cut(s) 2526
MlyI GAGTC 1 cut(s) 2846
MmeI TCCRAC 6 cut(s) 196, 983, 1171, 2974, 3063, 3399
Mox20I TGGCCA 1 cut(s) 2526
Mph1103I ATGCAT 2 cut(s) 646, 3242
MroXI GAANNNNTTC 4 cut(s) 1632, 2128, 3370, 3412
MscI TGGCCA 1 cut(s) 2526
MslI CAYNNNNRTG 1 cut(s) 2210
Msp20I TGGCCA 1 cut(s) 2526
MspCI CTTAAG 1 cut(s) 1594
MspI CCGG 6 cut(s) 192, 862, 1167, 1183, 3100, 3350
MunI CAATTG 3 cut(s) 122, 1578, 2966
Mva1269I GAATGC 1 cut(s) 2257
MvnI CGCG 2 cut(s) 388, 1363
MwoI GCNNNNNNNGC 3 cut(s) 903, 1875, 3296
NciI CCSGG 3 cut(s) 192, 862, 1167
NcoI CCATGG 2 cut(s) 2527, 2956
NdeI CATATG 1 cut(s) 3001
NheI GCTAGC 1 cut(s) 2341
NlaIV GGNNCC 4 cut(s) 889, 1091, 1861, 3129
NmuCI GTSAC 9 cut(s) 585, 718, 781, 866, 1560, 1690, 1753, 1838, 3012
NsbI TGCGCA 1 cut(s) 1767
NsiI ATGCAT 2 cut(s) 646, 3242
NspI RCATGY 3 cut(s) 2734, 3013, 3401
NspV TTCGAA 1 cut(s) 1146
PagI TCATGA 2 cut(s) 747, 3231
PciI ACATGT 1 cut(s) 3009
PctI GAATGC 1 cut(s) 2257
PdmI GAANNNNTTC 4 cut(s) 1632, 2128, 3370, 3412
PfeI GAWTC 9 cut(s) 219, 1067, 1760, 1954, 2668, 3197, 3272, 3371, 3413
PfoI TCCNGGA 2 cut(s) 459, 1434
PinAI ACCGGT 1 cut(s) 1182
PkrI GCNGC 4 cut(s) 804, 2071, 2491, 3098
PleI GAGTC 1 cut(s) 2846
PpsI GAGTC 1 cut(s) 2846
Ppu21I YACGTR 1 cut(s) 810
PscI ACATGT 1 cut(s) 3009
PshBI ATTAAT 1 cut(s) 1890
PsiI TTATAA 2 cut(s) 1323, 2550
Psp1406I AACGTT 1 cut(s) 24
PspFI CCCAGC 1 cut(s) 703
PspN4I GGNNCC 4 cut(s) 889, 1091, 1861, 3129
PspPI GGNCC 5 cut(s) 701, 1673, 2778, 3180, 3280
PstNI CAGNNNCTG 1 cut(s) 785
PsuI RGATCY 3 cut(s) 2233, 2878, 3127
RsaI GTAC 4 cut(s) 1640, 2216, 2352, 3264
RsaNI GTAC 4 cut(s) 1639, 2215, 2351, 3263
RseI CAYNNNNRTG 1 cut(s) 2210
SatI GCNGC 4 cut(s) 803, 2070, 2490, 3097
Sau96I GGNCC 5 cut(s) 701, 1673, 2778, 3180, 3280
SchI GAGTC 1 cut(s) 2846
SduI GDGCHC 7 cut(s) 309, 362, 1284, 1337, 1776, 2153, 2502
SfaNI GCATC 6 cut(s) 1628, 2081, 2896, 3227, 3335, 3355
SfcI CTRYAG 2 cut(s) 507, 619
SfuI TTCGAA 1 cut(s) 1146
SinI GGWCC 2 cut(s) 2778, 3280
SmiMI CAYNNNNRTG 1 cut(s) 2210
SmlI CTYRAG 2 cut(s) 1594, 2854
SmoI CTYRAG 2 cut(s) 1594, 2854
SpeI ACTAGT 3 cut(s) 331, 1306, 2888
SsiI CCGC 6 cut(s) 208, 388, 802, 1363, 2267, 3096
SspI AATATT 3 cut(s) 2896, 2952, 3030
StyI CCWWGG 2 cut(s) 2527, 2956
TaiI ACGT 4 cut(s) 27, 812, 2244, 3154
TaqI TCGA 8 cut(s) 944, 1146, 1990, 2063, 2619, 2763, 3200, 3451
TaqII GACCGA 1 cut(s) 3297
TatI WGTACW 3 cut(s) 1638, 2214, 3262
TauI GCSGC 2 cut(s) 805, 3099
TfiI GAWTC 9 cut(s) 219, 1067, 1760, 1954, 2668, 3197, 3272, 3371, 3413
TseFI GTSAC 9 cut(s) 585, 718, 781, 866, 1560, 1690, 1753, 1838, 3012
TseI GCWGC 2 cut(s) 2069, 2489
Tsp45I GTSAC 9 cut(s) 585, 718, 781, 866, 1560, 1690, 1753, 1838, 3012
TspGWI ACGGA 4 cut(s) 1102, 1772, 3420, 3425
Vha464I CTTAAG 1 cut(s) 1594
VpaK11BI GGWCC 2 cut(s) 2778, 3280
VspI ATTAAT 1 cut(s) 1890
XapI RAATTY 8 cut(s) 196, 445, 842, 1171, 1194, 1629, 2624, 2925
XbaI TCTAGA 1 cut(s) 2902
XceI RCATGY 3 cut(s) 2734, 3013, 3401
XcmI CCANNNNNNNNNTGG 1 cut(s) 2534
XmiI GTMKAC 2 cut(s) 374, 1349
XmnI GAANNNNTTC 4 cut(s) 1632, 2128, 3370, 3412
Zsp2I ATGCAT 2 cut(s) 646, 3242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.