RLG00000031286

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
3731737 .. 3733576
1840 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031286

Sequence Viewer

Length: 798 bp
ATGTGTCAAACTCTTGCCCAAAGTCAAGTTATCAGATGCGTTGTTGATCCGTTATGCACTTCCAGGGACAACATAAAAGGGAGTGAAGAACAATTGAAGGATGTTGATGGAGACTATTTAGTGTCCAAAGAAAGCAAGTTTGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCTATCTGTATGTTGGAATATGGTATTCTCAGACTAGAGTAGCTAATAAAACAGTGGTGTGGGTTGCCAATCGGAACAATCCCATCACCTCTGGTGTGCTCACAATAAACAAGTATGGAGAACTAGTCCTTTATGCATATAACATGGAGAGCACTCCTATTTGGTCTACTAATGTGTCGCGGTCGGTTCCAAATGTTGACAGAAGCACTTTATCTGCACAGCTTTTAGATACAGGAAATTTAGTTGTGTTCCAGGATGATAAAAGTGAAATCTCCATATGGCAAAGTTTTGATTATCCTACAGATACTCTAATTGTAGGTATGAAAGTTGGAGTGAATTGGAAAACTGGGCTAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCCGGAACTGGGGACTATACCTTTAGGCTTCATTCAGATCAGACTGCCTCCCCTCAATATTTTTTGTATAAAGGTTTGAGCAAATATTGGCTAAGTGATCCAGGGCTAGCGCCTAGTTTTGTCACTAATCAAGAGGAAACTTATTATATCCTAAATTACACCAATGCAATTACAAGAATGACGTTGACTGATTCTGAGTTAGATCTTCTTACATGGGATGATGGTGGCCTTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

266

Amino Acids

29.95

Weight (kDa)

4.53

Isoelectric Point (pI)

32.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 183 5.5e-32 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000112)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g03320 FvH4_3g03322 FvH4_3g03323 FvH4_3g03340 FvH4_3g03350 FvH4_3g03351 FvH4_3g03370 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03390 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g03410 FvH4_3g06140 FvH4_6g00257 FvH4_6g00257 FvH4_6g00270 FvH4_6g00300 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800 FvH4_6g20800
malus_domestica MD05G1232700.v1.1 MD05G1327700.v1.1 MD05G1327800.v1.1 MD05G1327900.v1.1 MD05G1328000.v1.1 MD05G1328200.v1.1 MD05G1328300.v1.1 MD05G1328500.v1.1 MD05G1332000.v1.1 MD05G1332100.v1.1 MD10G1307600.v1.1 MD10G1307800.v1.1
prunus_persica Prupe.4G031900_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032000_v2.0.a1 Prupe.4G032100_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1 Prupe.4G032200_v2.0.a1
pyrus_communis pycom05g30180 pycom05g30190 pycom05g30200 pycom05g30210 pycom10g25920 pycom10g25930
rosa_chinensis RchiOBHm_Chr2g0130831 RchiOBHm_Chr2g0132531 RchiOBHm_Chr2g0132541 RchiOBHm_Chr3g0455681 RchiOBHm_Chr3g0476681 RchiOBHm_Chr3g0476761 RchiOBHm_Chr3g0476771 RchiOBHm_Chr3g0476791 RchiOBHm_Chr3g0476801 RchiOBHm_Chr3g0476811 RchiOBHm_Chr4g0413551 RchiOBHm_Chr4g0413561 RchiOBHm_Chr5g0002911 RchiOBHm_Chr5g0005071 RchiOBHm_Chr5g0005101 RchiOBHm_Chr5g0005111 RchiOBHm_Chr5g0005121 RchiOBHm_Chr5g0005131 RchiOBHm_Chr5g0005141 RchiOBHm_Chr5g0005161 RchiOBHm_Chr5g0005171 RchiOBHm_Chr5g0006341 RchiOBHm_Chr5g0046161 RchiOBHm_Chr5g0046171 RchiOBHm_Chr5g0046181 RchiOBHm_Chr5g0046221 RchiOBHm_Chr5g0046231 RchiOBHm_Chr7g0224061 RchiOBHm_Chr7g0224081 RchiOBHm_Chr7g0224101 RchiOBHm_Chr7g0224111 RchiOBHm_Chr7g0224121
rosa_laevigata RLG00000010193 RLG00000019146 RLG00000019148 RLG00000019149 RLG00000019150 RLG00000023750 RLG00000023751 RLG00000023753 RLG00000029486 RLG00000031068 RLG00000031069 RLG00000031284 RLG00000031285 RLG00000031286 RLG00000031289 RLG00000031290 RLG00000031291 RLG00000031292 RLG00000031293 RLG00000031294 RLG00000031295 RLG00000031296 RLG00000031297 RLG00000031363 RLG00000032618 RLG00000032619
rosa_multiflora Rmu_co8147584.1_g000001 Rmu_co8205828.1_g000001 Rmu_co8373645.1_g000001 Rmu_co8407679.1_g000001 Rmu_co8452561.1_g000001 Rmu_sc0001035.1_g000076 Rmu_sc0001884.1_g000026 Rmu_sc0001884.1_g000027 Rmu_sc0001884.1_g000035 Rmu_sc0002157.1_g000026 Rmu_sc0002399.1_g000006 Rmu_sc0002399.1_g000007 Rmu_sc0002883.1_g000010 Rmu_sc0003629.1_g000014 Rmu_sc0003884.1_g000004 Rmu_sc0007865.1_g000005 Rmu_sc0008085.1_g000013 Rmu_sc0008085.1_g000014 Rmu_sc0008085.1_g000016 Rmu_sc0008085.1_g000018 Rmu_sc0008432.1_g000004 Rmu_sc0008714.1_g000002 Rmu_sc0009296.1_g000008 Rmu_sc0009296.1_g000009 Rmu_sc0009296.1_g000011 Rmu_sc0010281.1_g000001 Rmu_sc0010281.1_g000002 Rmu_sc0010714.1_g000011 Rmu_sc0010714.1_g000016 Rmu_sc0011169.1_g000001 Rmu_sc0011169.1_g000007 Rmu_sc0013603.1_g000006 Rmu_sc0020478.1_g000003 Rmu_sc0020478.1_g000007 Rmu_sc0025106.1_g000012 Rmu_sc0032709.1_g000001 Rmu_sc0033028.1_g000001
rosa_roxburghii Rroxscaffold_1G00069570 Rroxscaffold_1G00069610 Rroxscaffold_1G00069620 Rroxscaffold_1G00070480 Rroxscaffold_1G00070490 Rroxscaffold_1G00070500 Rroxscaffold_1G00070510 Rroxscaffold_1G00070520 Rroxscaffold_1G00070530 Rroxscaffold_1G00070540 Rroxscaffold_1G00070550 Rroxscaffold_1G00070590 Rroxscaffold_1G00072950 Rroxscaffold_1G00073080 Rroxscaffold_2G00111810 Rroxscaffold_2G00111820 Rroxscaffold_2G00113530 Rroxscaffold_2G00113870 Rroxscaffold_6G00405010 Rroxscaffold_6G00405020 Rroxscaffold_6G00423590 Rroxscaffold_6G00424100
rosa_rugosa Rorug02G0293200 Rorug02G0293300 Rorug02G0293400 Rorug02G0305900 Rorug02G0305900 Rorug03G0009100 Rorug03G0157000 Rorug03G0157000 Rorug03G0304900 Rorug04G0400500 Rorug04G0415200 Rorug04G0415300 Rorug04G0415400 Rorug04G0415500 Rorug04G0421100 Rorug05G0068000 Rorug05G0068100 Rorug05G0068200 Rorug05G0068500 Rorug05G0224600 Rorug05G0224700
rosa_samantha Rh2CG331700 Rh2CG341600 Rh2CG341700 Rh2DG381200 Rh3DG071200 Rh3DG233400 Rh3DG233500 Rh3DG233600 Rh5AG043100 Rh5CG026000 Rh5CG047700 Rh5CG047800 Rh5CG047900 Rh5CG048000 Rh5CG048100 Rh5CG048300 Rh5CG056500 Rh5CG340500 Rh5CG340700 Rh5CG340800 Rh7AG365000
rosa_wichuraiana Rw0G002360 Rw0G002370 Rw0G012520 Rw0G018230 Rw0G019190 Rw2G027480 Rw2G029150 Rw3G005520 Rw3G005880 Rw3G005890 Rw3G018840 Rw3G018850 Rw3G018870 Rw3G018880 Rw3G020740 Rw5G002190 Rw5G004180 Rw5G004190 Rw5G004890 Rw5G013960 Rw5G014000 Rw5G028610 Rw7G030910 Rw7G030920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 338
AccII CGCG 1 cut(s) 352
AciI CCGC 1 cut(s) 352
AclWI GGATC 2 cut(s) 41, 653
AcsI RAATTY 2 cut(s) 166, 409
AcuI CTGAAG 1 cut(s) 139
AfiI CCNNNNNNNGG 2 cut(s) 569, 570
AgsI TTSAA 3 cut(s) 97, 143, 794
AhlI ACTAGT 1 cut(s) 295
AjnI CCWGG 3 cut(s) 62, 423, 661
AluBI AGCT 3 cut(s) 174, 215, 394
AluI AGCT 3 cut(s) 174, 215, 394
Alw21I GWGCWC 2 cut(s) 273, 326
Alw26I GTCTC 1 cut(s) 105
AlwI GGATC 2 cut(s) 41, 653
AoxI GGCC 1 cut(s) 787
ApoI RAATTY 2 cut(s) 166, 409
AspLEI GCGC 1 cut(s) 673
AsuC2I CCSGG 2 cut(s) 162, 564
AsuHPI GGTGA 1 cut(s) 250
AsuNHI GCTAGC 1 cut(s) 667
Bbv12I GWGCWC 2 cut(s) 273, 326
BccI CCATC 3 cut(s) 101, 263, 776
BciT130I CCWGG 3 cut(s) 64, 425, 663
BcnI CCSGG 2 cut(s) 162, 564
BcoDI GTCTC 1 cut(s) 105
BcuI ACTAGT 1 cut(s) 295
BfaI CTAG 6 cut(s) 171, 207, 296, 524, 668, 675
BfmI CTRYAG 1 cut(s) 471
BfoI RGCGCY 1 cut(s) 674
BglII AGATCT 1 cut(s) 763
Bme1390I CCNGG 5 cut(s) 64, 162, 425, 564, 663
BmiI GGNNCC 1 cut(s) 360
BmrFI CCNGG 5 cut(s) 64, 162, 425, 564, 663
BmrI ACTGGG 2 cut(s) 528, 579
BmsI GCATC 1 cut(s) 26
BmtI GCTAGC 1 cut(s) 671
BmuI ACTGGG 2 cut(s) 528, 579
BpuMI CCSGG 2 cut(s) 162, 564
BsaJI CCNNGG 4 cut(s) 63, 160, 562, 662
BsaXI ACNNNNNCTCC 2 cut(s) 282, 312
Bsc4I CCNNNNNNNGG 2 cut(s) 569, 570
Bse1I ACTGG 2 cut(s) 523, 574
BseBI CCWGG 3 cut(s) 64, 425, 663
BseDI CCNNGG 4 cut(s) 63, 160, 562, 662
BseGI GGATG 3 cut(s) 106, 433, 784
BseLI CCNNNNNNNGG 2 cut(s) 569, 570
BseMII CTCAG 2 cut(s) 215, 747
BseNI ACTGG 2 cut(s) 523, 574
BsgI GTGCAG 1 cut(s) 372
Bsh1236I CGCG 1 cut(s) 352
Bsh1285I CGRYCG 1 cut(s) 356
BshFI GGCC 1 cut(s) 789
BsiEI CGRYCG 1 cut(s) 356
BsiHKAI GWGCWC 2 cut(s) 273, 326
BsiSI CCGG 2 cut(s) 162, 564
BslFI GGGAC 2 cut(s) 80, 587
BslI CCNNNNNNNGG 2 cut(s) 569, 570
BsmAI GTCTC 1 cut(s) 105
BsmFI GGGAC 2 cut(s) 80, 587
BsnI GGCC 1 cut(s) 789
Bsp1286I GDGCHC 2 cut(s) 273, 326
Bsp143I GATC 4 cut(s) 46, 598, 658, 763
BspACI CCGC 1 cut(s) 352
BspANI GGCC 1 cut(s) 789
BspCNI CTCAG 2 cut(s) 214, 748
BspFNI CGCG 1 cut(s) 352
BspLI GGNNCC 1 cut(s) 360
BspOI GCTAGC 1 cut(s) 671
BspPI GGATC 2 cut(s) 41, 653
BsrI ACTGG 2 cut(s) 523, 574
BssECI CCNNGG 4 cut(s) 63, 160, 562, 662
BssMI GATC 4 cut(s) 46, 598, 658, 763
Bst2UI CCWGG 3 cut(s) 64, 425, 663
Bst4CI ACNGT 1 cut(s) 226
BstC8I GCNNGC 1 cut(s) 669
BstDEI CTNAG 3 cut(s) 201, 653, 756
BstF5I GGATG 3 cut(s) 106, 433, 784
BstFNI CGCG 1 cut(s) 352
BstH2I RGCGCY 1 cut(s) 674
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 4 cut(s) 49, 601, 661, 766
BstMAI GTCTC 1 cut(s) 105
BstMBI GATC 4 cut(s) 46, 598, 658, 763
BstMCI CGRYCG 1 cut(s) 356
BstNI CCWGG 3 cut(s) 64, 425, 663
BstSCI CCNGG 5 cut(s) 62, 160, 423, 562, 661
BstSFI CTRYAG 1 cut(s) 471
BstUI CGCG 1 cut(s) 352
BstX2I RGATCY 1 cut(s) 763
BstYI RGATCY 1 cut(s) 763
BsuRI GGCC 1 cut(s) 789
BtsCI GGATG 3 cut(s) 106, 433, 784
BtsIMutI CAGTG 1 cut(s) 231
Cac8I GCNNGC 1 cut(s) 669
CfoI GCGC 1 cut(s) 673
CviAII CATG 2 cut(s) 316, 774
CviJI RGCY 9 cut(s) 159, 174, 215, 394, 523, 589, 652, 667, 789
CviKI_1 RGCY 9 cut(s) 159, 174, 215, 394, 523, 589, 652, 667, 789
DdeI CTNAG 3 cut(s) 201, 653, 756
DpnI GATC 4 cut(s) 48, 600, 660, 765
DpnII GATC 4 cut(s) 46, 598, 658, 763
Eco57I CTGAAG 1 cut(s) 139
EcoRII CCWGG 3 cut(s) 62, 423, 661
EcoT22I ATGCAT 1 cut(s) 310
FaeI CATG 2 cut(s) 319, 777
FaqI GGGAC 2 cut(s) 80, 587
FatI CATG 2 cut(s) 315, 773
FauNDI CATATG 1 cut(s) 449
FblI GTMKAC 1 cut(s) 338
FokI GGATG 3 cut(s) 113, 440, 791
FspBI CTAG 6 cut(s) 171, 207, 296, 524, 668, 675
GlaI GCGC 1 cut(s) 672
HaeII RGCGCY 1 cut(s) 674
HaeIII GGCC 1 cut(s) 789
HapII CCGG 2 cut(s) 162, 564
HhaI GCGC 1 cut(s) 673
Hin1II CATG 2 cut(s) 319, 777
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 2 cut(s) 370, 747
HindII GTYRAC 2 cut(s) 370, 747
HinfI GANTC 1 cut(s) 752
HpaII CCGG 2 cut(s) 162, 564
HphI GGTGA 1 cut(s) 250
Hpy166II GTNNAC 3 cut(s) 339, 370, 747
Hpy188I TCNGA 6 cut(s) 35, 204, 246, 598, 603, 757
Hpy188III TCNNGA 1 cut(s) 692
Hpy8I GTNNAC 3 cut(s) 339, 370, 747
HpyAV CCTTC 1 cut(s) 91
HpyCH4III ACNGT 1 cut(s) 226
HpyCH4IV ACGT 1 cut(s) 743
HpyCH4V TGCA 4 cut(s) 57, 308, 389, 728
HpyF3I CTNAG 3 cut(s) 201, 653, 756
HpySE526I ACGT 1 cut(s) 743
Hsp92II CATG 2 cut(s) 319, 777
HspAI GCGC 1 cut(s) 671
Kzo9I GATC 4 cut(s) 46, 598, 658, 763
LweI GCATC 1 cut(s) 26
MaeI CTAG 6 cut(s) 171, 207, 296, 524, 668, 675
MaeII ACGT 1 cut(s) 743
MaeIII GTNAC 2 cut(s) 549, 682
MalI GATC 4 cut(s) 48, 600, 660, 765
MboI GATC 4 cut(s) 46, 598, 658, 763
MboII GAAGA 3 cut(s) 98, 145, 758
MfeI CAATTG 1 cut(s) 92
MflI RGATCY 1 cut(s) 763
MhlI GDGCHC 2 cut(s) 273, 326
MluCI AATT 8 cut(s) 92, 143, 166, 409, 483, 508, 715, 729
MmeI TCCRAC 2 cut(s) 166, 481
MnlI CCTC 4 cut(s) 271, 619, 624, 688
Mph1103I ATGCAT 1 cut(s) 310
MseI TTAA 1 cut(s) 536
MspI CCGG 2 cut(s) 162, 564
MspR9I CCNGG 5 cut(s) 64, 162, 425, 564, 663
MunI CAATTG 1 cut(s) 92
MvaI CCWGG 3 cut(s) 64, 425, 663
MvnI CGCG 1 cut(s) 352
NciI CCSGG 2 cut(s) 162, 564
NdeI CATATG 1 cut(s) 449
NdeII GATC 4 cut(s) 46, 598, 658, 763
NheI GCTAGC 1 cut(s) 667
NlaIII CATG 2 cut(s) 319, 777
NlaIV GGNNCC 1 cut(s) 360
NmuCI GTSAC 2 cut(s) 549, 682
NsiI ATGCAT 1 cut(s) 310
PfeI GAWTC 1 cut(s) 752
PfoI TCCNGGA 1 cut(s) 423
Psp6I CCWGG 3 cut(s) 62, 423, 661
PspGI CCWGG 3 cut(s) 62, 423, 661
PspN4I GGNNCC 1 cut(s) 360
PsuI RGATCY 1 cut(s) 763
SaqAI TTAA 1 cut(s) 536
Sau3AI GATC 4 cut(s) 46, 598, 658, 763
ScrFI CCNGG 5 cut(s) 64, 162, 425, 564, 663
SduI GDGCHC 2 cut(s) 273, 326
SetI ASST 8 cut(s) 176, 217, 263, 396, 493, 584, 637, 746
SfaNI GCATC 1 cut(s) 26
SfcI CTRYAG 1 cut(s) 471
SpeI ACTAGT 1 cut(s) 295
Sse9I AATT 8 cut(s) 92, 143, 166, 409, 483, 508, 715, 729
SsiI CCGC 1 cut(s) 352
SspI AATATT 2 cut(s) 620, 647
SspMI CTAG 6 cut(s) 171, 207, 296, 524, 668, 675
StyD4I CCNGG 5 cut(s) 62, 160, 423, 562, 661
TaaI ACNGT 1 cut(s) 226
TaiI ACGT 1 cut(s) 746
TasI AATT 8 cut(s) 92, 143, 166, 409, 483, 508, 715, 729
TfiI GAWTC 1 cut(s) 752
Tru1I TTAA 1 cut(s) 536
Tru9I TTAA 1 cut(s) 536
TscAI CASTG 1 cut(s) 231
TseFI GTSAC 2 cut(s) 549, 682
Tsp45I GTSAC 2 cut(s) 549, 682
TspDTI ATGAA 2 cut(s) 509, 581
TspGWI ACGGA 1 cut(s) 39
TspRI CASTG 1 cut(s) 231
XapI RAATTY 2 cut(s) 166, 409
XmiI GTMKAC 1 cut(s) 338
XspI CTAG 6 cut(s) 171, 207, 296, 524, 668, 675
Zsp2I ATGCAT 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.