FvH4_4g13943

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000094
Physical Location & Seq
Reverse (-)
17493609 .. 17494814
1206 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g13943.t1

Sequence Viewer

Length: 1206 bp
ATGTCTCCATGGGGTGCTCCAGTGTTGTTTGTTAAGAAGAAAGATGGCACCATGAGACTATGCATTGATTATAGGAAGTTGAATCAGGTCACAGTGAAGAATAAATATCCGTTGCCTCGGATCGATGATTTATTTGATCAGCTGAGGGGTGTCTCTGTTTTCTCTAAGATTGATTTGAGATCGGGTTATCATCAGTTGCGGATCCGAGAGGGGGACATAGCCAAGACTGCTTTTCGGTCACGATATGGTCATTATGAGTTTGTGGTGATGCCATTTGGACTTACTAATGCACCCGCGGCATTCATGGATCTCATGAATAGGGTGTTTAGTCCATACCTTGATCGTTTCGTGATCGTATTCATAGATGACATATTGGTTTACTCAAGAAGTGAGAAGGAGCATGCCAAGCATCTAAGAATAATATTGCGGACTTTGGAAAAGTCGCAGTTATTTGCTAAGTTTAGCAAGTGTGAGTTTTGGCTAGATAAAGTGGGGTTTTTGGGTCATGTGATTTCGGCAGAAGGAGTTAGTGTGGATCCCCAAAAGGTGGAAGCAGTGTCGAATTGGAGAAGACCCACCACTGTGACGGAGATTCGTAGTTTCTTGGGATTAGCAGGTTATTATCGGCGCTTTGTGAAAGATTTTTCAAAGATTGCTGCTCCTTTCACAAAGTTGACCAGGAAGGGGGTTAAGTTTGAATGGTCAGATCAGTGCGAGCAAAATTTTCAAGAATTGAAGAATTGCTTGACAAGTGCTCCTGTTTTGGCACTTCCGGATGATAGTGGAGAATATGTGGTCTATTGTGATGCTTCTAGACGTGGTCTAGGTGGAGTTTTGATGCAGCATGATCGAGTTATTGCCTACGCTTCTAGGCAATTGAAGCCGCATGAGGGGAATTATCCTACTCATGATCTGGAGCTTGCAGCGTTAGTTTTTGCTCTCAAGTTGTGGAGACACTATCTTTATGGAGCCAAGTGTCAGATATTTACCGATCACAAGAGTCTTCGGTATGTGTTCACTCAAAGAAAGCTTAATATGAGACAGAGAAGGTGGATGAAGTTAATCAATGATTATGATTGCACTATTGAGTATCATCCTGGAAAAGCTAATGTGGTAGCTGATGCTCTTAGTCGAAATCCCTCCATATCTTTATCTCATATAAAGATGGTTCGTGTTCCGCTTCTTTGTGAGTTGCGAGCTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2 RVT_1 Retrotrans_gag rve zf-CCHC

Protein Analysis

402

Amino Acids

46.48

Weight (kDa)

9.6

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 11 - 171 2.4e-36 Reverse transcriptase (RNA-dependent DNA polymerase)
RT_RNaseH_2 PF17919 234 - 328 2.4e-32 RNase H-like domain found in reverse transcriptase
RT_RNaseH PF17917 260 - 358 1.4e-32 RNase H-like domain found in reverse transcriptase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42190
fragaria_vesca FvH4_1g22371 FvH4_1g23261 FvH4_1g27933 FvH4_1g27934 FvH4_1g29231 FvH4_2g02781 FvH4_2g08031 FvH4_2g08581 FvH4_3g06961 FvH4_3g06962 FvH4_3g13531 FvH4_3g14391 FvH4_3g14392 FvH4_3g18622 FvH4_3g18964 FvH4_3g26314 FvH4_3g28781 FvH4_3g30771 FvH4_3g30772 FvH4_3g31752 FvH4_3g32803 FvH4_3g35751 FvH4_3g35752 FvH4_4g02151 FvH4_4g02642 FvH4_4g05523 FvH4_4g05524 FvH4_4g06574 FvH4_4g06722 FvH4_4g08644 FvH4_4g08645 FvH4_4g08646 FvH4_4g08851 FvH4_4g08971 FvH4_4g09081 FvH4_4g09243 FvH4_4g09244 FvH4_4g09283 FvH4_4g10021 FvH4_4g10032 FvH4_4g10033 FvH4_4g10182 FvH4_4g10361 FvH4_4g12502 FvH4_4g12503 FvH4_4g13341 FvH4_4g13942 FvH4_4g13943 FvH4_4g13944 FvH4_4g14432 FvH4_4g14822 FvH4_4g14823 FvH4_4g15291 FvH4_4g15292 FvH4_4g15293 FvH4_4g15471 FvH4_4g15583 FvH4_4g15584 FvH4_4g15585 FvH4_4g15586 FvH4_4g15587 FvH4_4g15591 FvH4_4g15592 FvH4_4g15593 FvH4_4g16179 FvH4_4g18131 FvH4_4g21031 FvH4_4g22021 FvH4_4g22021 FvH4_4g22042 FvH4_5g03402 FvH4_5g07411 FvH4_5g13881 FvH4_5g15792 FvH4_5g24682 FvH4_5g24911 FvH4_5g25322 FvH4_5g25641 FvH4_5g36692 FvH4_5g38072 FvH4_5g38171 FvH4_6g05202 FvH4_6g08531 FvH4_6g16342 FvH4_6g21771 FvH4_6g23303 FvH4_6g23961 FvH4_6g25381 FvH4_6g27021 FvH4_6g27022 FvH4_6g30091 FvH4_6g30092 FvH4_7g02051 FvH4_7g06031 FvH4_7g07031 FvH4_7g07581 FvH4_7g08381 FvH4_7g11551 FvH4_7g19711 FvH4_7g25621 FvH4_7g29722
malus_domestica MD06G1134500.v1.1 MD09G1067600.v1.1 MD13G1145500.v1.1 MD15G1166500.v1.1 MD16G1270000.v1.1
prunus_persica Prupe.7G030900_v2.0.a1
pyrus_communis pycom01g00710 pycom01g03760 pycom03g10770 pycom04g02180 pycom05g08050 pycom06g04140 pycom06g11110 pycom07g07550 pycom07g21570 pycom08g17240 pycom09g13900 pycom09g19570 pycom10g22300 pycom11g03210 pycom11g13750 pycom11g24890 pycom12561g00270 pycom12668g00020 pycom12g11280 pycom12g20720 pycom12g20730 pycom13g21410 pycom13g21660 pycom14g06010 pycom14g06370 pycom14g12800 pycom16g21440 pycom16g22530 pycom17g02030 pycom420g00170 pycom50g00020 pycom5153684g00110 pycom520g00860 pycom581g00060
rosa_chinensis RchiOBHm_Chr0c08g0498091 RchiOBHm_Chr0c08g0498101 RchiOBHm_Chr1g0326991 RchiOBHm_Chr2g0084311 RchiOBHm_Chr2g0090701 RchiOBHm_Chr2g0098591 RchiOBHm_Chr2g0109491 RchiOBHm_Chr2g0109501 RchiOBHm_Chr2g0130801 RchiOBHm_Chr2g0145931 RchiOBHm_Chr2g0168091 RchiOBHm_Chr3g0457081 RchiOBHm_Chr3g0457091 RchiOBHm_Chr3g0467781 RchiOBHm_Chr3g0467791 RchiOBHm_Chr3g0493771 RchiOBHm_Chr3g0494051 RchiOBHm_Chr3g0496881 RchiOBHm_Chr4g0401391 RchiOBHm_Chr4g0414861 RchiOBHm_Chr4g0424081 RchiOBHm_Chr5g0009611 RchiOBHm_Chr5g0049881 RchiOBHm_Chr5g0050351 RchiOBHm_Chr5g0053791 RchiOBHm_Chr5g0078031 RchiOBHm_Chr6g0256481 RchiOBHm_Chr6g0271231 RchiOBHm_Chr6g0286381 RchiOBHm_Chr7g0197101 RchiOBHm_Chr7g0221891 RchiOBHm_Chr7g0237801 RchiOBHm_Chr7g0237821
rosa_multiflora Rmu_sc0000509.1_g000034 Rmu_sc0004751.1_g000014 Rmu_sc0008546.1_g000002 Rmu_sc0009320.1_g000003 Rmu_sc0010661.1_g000006 Rmu_sc0029652.1_g000002
rosa_roxburghii Rroxscaffold_10G00433150 Rroxscaffold_15G00447630 Rroxscaffold_26G00447790 Rroxscaffold_29G00441810 Rroxscaffold_32G00442860 Rroxscaffold_33G00439800 Rroxscaffold_34G00443230 Rroxscaffold_3G00220560 Rroxscaffold_3G00227370 Rroxscaffold_3G00239080 Rroxscaffold_3G00239090 Rroxscaffold_3G00273190 Rroxscaffold_4G00323530 Rroxscaffold_4G00326840 Rroxscaffold_57G00443110 Rroxscaffold_5G00338590 Rroxscaffold_5G00347530 Rroxscaffold_68G00446990 Rroxscaffold_76G00448570 Rroxscaffold_90G00448860
rosa_rugosa Rorug06G0233600
rosa_samantha Rh3CG302700 Rh6DG286700
rosa_wichuraiana Rw0G002280 Rw0G004080 Rw0G011830 Rw1G003690 Rw1G008800 Rw1G009130 Rw1G009140 Rw1G009150 Rw1G009160 Rw1G009410 Rw1G009580 Rw1G012770 Rw1G015850 Rw1G026860 Rw2G003780 Rw2G006480 Rw2G016520 Rw2G016960 Rw2G018170 Rw2G025180 Rw2G025510 Rw2G025610 Rw2G025750 Rw2G025920 Rw2G029950 Rw2G046360 Rw2G046370 Rw2G046380 Rw3G009070 Rw3G025820 Rw3G027340 Rw3G027900 Rw3G028150 Rw3G029060 Rw4G002440 Rw4G005960 Rw4G007520 Rw4G011970 Rw4G011980 Rw4G012190 Rw4G012530 Rw4G018490 Rw4G026380 Rw5G003970 Rw5G030920 Rw5G031780 Rw5G031900 Rw5G033030 Rw5G033040 Rw5G036330 Rw5G039730 Rw5G048110 Rw6G006670 Rw6G007910 Rw6G009720 Rw6G010990 Rw6G012930 Rw6G012940 Rw6G013420 Rw6G014690 Rw6G015290 Rw6G015790 Rw6G015920 Rw6G036510 Rw7G016650 Rw7G023140 Rw7G028650 Rw7G036450 Rw7G036460 Rw7G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 605
AccB1I GGYRCC 1 cut(s) 47
AccB7I CCANNNNNTGG 1 cut(s) 547
AccII CGCG 1 cut(s) 296
AccIII TCCGGA 1 cut(s) 772
AciI CCGC 6 cut(s) 199, 294, 296, 427, 884, 1178
AclWI GGATC 6 cut(s) 128, 196, 209, 315, 530, 543
AcsI RAATTY 1 cut(s) 721
AfiI CCNNNNNNNGG 4 cut(s) 211, 547, 684, 890
AgsI TTSAA 6 cut(s) 82, 648, 698, 728, 736, 880
AjiI CACGTC 1 cut(s) 818
AjnI CCWGG 2 cut(s) 677, 1096
AleI CACNNNNGTG 1 cut(s) 581
AluBI AGCT 6 cut(s) 142, 919, 1030, 1106, 1118, 1199
AluI AGCT 6 cut(s) 142, 919, 1030, 1106, 1118, 1199
Alw21I GWGCWC 2 cut(s) 19, 757
Alw26I GTCTC 5 cut(s) 9, 49, 157, 946, 1033
AlwI GGATC 6 cut(s) 128, 196, 209, 315, 530, 543
Aor13HI TCCGGA 1 cut(s) 772
ApeKI GCWGC 3 cut(s) 656, 841, 923
ApoI RAATTY 1 cut(s) 721
AspLEI GCGC 1 cut(s) 630
AsuHPI GGTGA 1 cut(s) 277
BamHI GGATCC 2 cut(s) 201, 535
BanI GGYRCC 1 cut(s) 47
BbsI GAAGAC 2 cut(s) 577, 995
Bbv12I GWGCWC 2 cut(s) 19, 757
BbvCI CCTCAGC 1 cut(s) 143
BbvI GCAGC 3 cut(s) 643, 853, 935
BccI CCATC 2 cut(s) 38, 1159
BcgI CGANNNNNNTGC 2 cut(s) 830, 864
BciT130I CCWGG 2 cut(s) 679, 1098
BclI TGATCA 1 cut(s) 136
BcoDI GTCTC 5 cut(s) 9, 49, 157, 946, 1033
BfaI CTAG 4 cut(s) 482, 813, 824, 870
BfoI RGCGCY 1 cut(s) 631
BfuAI ACCTGC 1 cut(s) 605
BisI GCNGC 5 cut(s) 297, 657, 842, 884, 924
BlsI GCNGC 5 cut(s) 298, 658, 843, 885, 925
Bme1390I CCNGG 2 cut(s) 679, 1098
BmgBI CACGTC 1 cut(s) 818
BmiI GGNNCC 4 cut(s) 49, 203, 537, 970
BmrFI CCNGG 2 cut(s) 679, 1098
BmsI GCATC 5 cut(s) 258, 418, 796, 828, 1111
BpiI GAAGAC 2 cut(s) 577, 995
BpmI CTGGAG 1 cut(s) 935
Bpu10I CCTNAGC 1 cut(s) 143
BpuEI CTTGAG 2 cut(s) 367, 926
Bsa29I ATCGAT 1 cut(s) 123
BsaJI CCNNGG 3 cut(s) 8, 116, 294
BsaWI WCCGGW 1 cut(s) 772
BsaXI ACNNNNNCTCC 6 cut(s) 516, 546, 739, 769, 777, 807
Bsc4I CCNNNNNNNGG 4 cut(s) 211, 547, 684, 890
Bse1I ACTGG 1 cut(s) 20
BseAI TCCGGA 1 cut(s) 772
BseBI CCWGG 2 cut(s) 679, 1098
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 3 cut(s) 8, 116, 294
BseGI GGATG 3 cut(s) 781, 1059, 1093
BseLI CCNNNNNNNGG 4 cut(s) 211, 547, 684, 890
BseMII CTCAG 1 cut(s) 134
BseNI ACTGG 1 cut(s) 20
BseXI GCAGC 3 cut(s) 643, 853, 935
Bsh1236I CGCG 1 cut(s) 296
BshNI GGYRCC 1 cut(s) 47
BshVI ATCGAT 1 cut(s) 123
BsiHKAI GWGCWC 2 cut(s) 19, 757
BsiSI CCGG 1 cut(s) 773
BslFI GGGAC 1 cut(s) 227
BslI CCNNNNNNNGG 4 cut(s) 211, 547, 684, 890
BsmAI GTCTC 5 cut(s) 9, 49, 157, 946, 1033
BsmFI GGGAC 1 cut(s) 227
BsmI GAATGC 1 cut(s) 299
Bsp1286I GDGCHC 2 cut(s) 19, 757
Bsp13I TCCGGA 1 cut(s) 772
Bsp19I CCATGG 1 cut(s) 8
BspACI CCGC 6 cut(s) 199, 294, 296, 427, 884, 1178
BspCNI CTCAG 1 cut(s) 135
BspDI ATCGAT 1 cut(s) 123
BspEI TCCGGA 1 cut(s) 772
BspFNI CGCG 1 cut(s) 296
BspHI TCATGA 2 cut(s) 312, 907
BspLI GGNNCC 4 cut(s) 49, 203, 537, 970
BspMI ACCTGC 1 cut(s) 605
BspPI GGATC 6 cut(s) 128, 196, 209, 315, 530, 543
BspT107I GGYRCC 1 cut(s) 47
BsrI ACTGG 1 cut(s) 20
BssECI CCNNGG 3 cut(s) 8, 116, 294
BssT1I CCWWGG 1 cut(s) 8
Bst2UI CCWGG 2 cut(s) 679, 1098
Bst4CI ACNGT 2 cut(s) 94, 583
BstC8I GCNNGC 4 cut(s) 402, 716, 921, 1197
BstDEI CTNAG 5 cut(s) 143, 165, 413, 456, 1127
BstDSI CCRYGG 2 cut(s) 8, 294
BstF5I GGATG 3 cut(s) 781, 1059, 1093
BstFNI CGCG 1 cut(s) 296
BstH2I RGCGCY 1 cut(s) 631
BstHHI GCGC 1 cut(s) 630
BstMAI GTCTC 5 cut(s) 9, 49, 157, 946, 1033
BstMWI GCNNNNNNNGC 4 cut(s) 227, 296, 406, 880
BstNI CCWGG 2 cut(s) 679, 1098
BstNSI RCATGY 1 cut(s) 404
BstSCI CCNGG 2 cut(s) 677, 1096
BstUI CGCG 1 cut(s) 296
BstV1I GCAGC 3 cut(s) 643, 853, 935
BstV2I GAAGAC 2 cut(s) 577, 995
BstX2I RGATCY 3 cut(s) 201, 307, 535
BstYI RGATCY 3 cut(s) 201, 307, 535
Bsu15I ATCGAT 1 cut(s) 123
BsuTUI ATCGAT 1 cut(s) 123
BtgI CCRYGG 2 cut(s) 8, 294
BtrI CACGTC 1 cut(s) 818
BtsCI GGATG 3 cut(s) 781, 1059, 1093
BtsI GCAGTG 1 cut(s) 561
BtsIMutI CAGTG 5 cut(s) 27, 99, 561, 579, 716
BveI ACCTGC 1 cut(s) 605
Cac8I GCNNGC 4 cut(s) 402, 716, 921, 1197
CciI TCATGA 2 cut(s) 312, 907
CfoI GCGC 1 cut(s) 630
Cfr42I CCGCGG 1 cut(s) 297
ClaI ATCGAT 1 cut(s) 123
DdeI CTNAG 5 cut(s) 143, 165, 413, 456, 1127
Eco130I CCWWGG 1 cut(s) 8
EcoRII CCWGG 2 cut(s) 677, 1096
EcoT14I CCWWGG 1 cut(s) 8
EcoT22I ATGCAT 1 cut(s) 65
ErhI CCWWGG 1 cut(s) 8
FalI AAGNNNNNCTT 2 cut(s) 728, 760
FaqI GGGAC 1 cut(s) 227
FauI CCCGC 1 cut(s) 301
FbaI TGATCA 1 cut(s) 136
Fnu4HI GCNGC 5 cut(s) 297, 657, 842, 884, 924
FokI GGATG 3 cut(s) 788, 1066, 1080
Fsp4HI GCNGC 5 cut(s) 297, 657, 842, 884, 924
FspBI CTAG 4 cut(s) 482, 813, 824, 870
GlaI GCGC 1 cut(s) 629
GluI GCNGC 5 cut(s) 297, 657, 842, 884, 924
GsuI CTGGAG 1 cut(s) 935
HaeII RGCGCY 1 cut(s) 631
HapII CCGG 1 cut(s) 773
HhaI GCGC 1 cut(s) 630
Hin6I GCGC 1 cut(s) 628
HinP1I GCGC 1 cut(s) 628
HincII GTYRAC 1 cut(s) 675
HindII GTYRAC 1 cut(s) 675
HindIII AAGCTT 1 cut(s) 1028
HinfI GANTC 3 cut(s) 82, 592, 1000
HpaII CCGG 1 cut(s) 773
HphI GGTGA 1 cut(s) 277
Hpy166II GTNNAC 3 cut(s) 379, 675, 1017
Hpy188I TCNGA 4 cut(s) 120, 206, 706, 981
Hpy188III TCNNGA 9 cut(s) 240, 313, 349, 384, 728, 773, 813, 908, 914
Hpy8I GTNNAC 3 cut(s) 379, 675, 1017
HpyAV CCTTC 4 cut(s) 388, 515, 676, 1041
HpyCH4III ACNGT 2 cut(s) 94, 583
HpyCH4IV ACGT 1 cut(s) 817
HpyCH4V TGCA 5 cut(s) 63, 290, 841, 923, 1080
HpyF10VI GCNNNNNNNGC 4 cut(s) 227, 296, 406, 880
HpyF3I CTNAG 5 cut(s) 143, 165, 413, 456, 1127
HpySE526I ACGT 1 cut(s) 817
HspAI GCGC 1 cut(s) 628
Kpn2I TCCGGA 1 cut(s) 772
Ksp22I TGATCA 1 cut(s) 136
KspI CCGCGG 1 cut(s) 297
LmnI GCTCC 6 cut(s) 22, 397, 664, 760, 916, 968
Lsp1109I GCAGC 3 cut(s) 643, 853, 935
LweI GCATC 5 cut(s) 258, 418, 796, 828, 1111
MaeI CTAG 4 cut(s) 482, 813, 824, 870
MaeII ACGT 1 cut(s) 817
MaeIII GTNAC 3 cut(s) 88, 237, 583
MboII GAAGA 5 cut(s) 49, 109, 582, 748, 995
MfeI CAATTG 1 cut(s) 875
MflI RGATCY 3 cut(s) 201, 307, 535
MhlI GDGCHC 2 cut(s) 19, 757
MluCI AATT 6 cut(s) 562, 721, 731, 739, 875, 895
MlyI GAGTC 1 cut(s) 1009
MnlI CCTC 5 cut(s) 126, 138, 202, 883, 1150
Mph1103I ATGCAT 1 cut(s) 65
MroI TCCGGA 1 cut(s) 772
MseI TTAA 4 cut(s) 33, 690, 1032, 1061
MslI CAYNNNNRTG 1 cut(s) 581
MspA1I CMGCKG 2 cut(s) 142, 296
MspI CCGG 1 cut(s) 773
MspR9I CCNGG 2 cut(s) 679, 1098
MunI CAATTG 1 cut(s) 875
Mva1269I GAATGC 1 cut(s) 299
MvaI CCWGG 2 cut(s) 679, 1098
MvnI CGCG 1 cut(s) 296
MwoI GCNNNNNNNGC 4 cut(s) 227, 296, 406, 880
NcoI CCATGG 1 cut(s) 8
NlaIV GGNNCC 4 cut(s) 49, 203, 537, 970
NmuCI GTSAC 3 cut(s) 88, 237, 583
NsiI ATGCAT 1 cut(s) 65
NspI RCATGY 1 cut(s) 404
OliI CACNNNNGTG 1 cut(s) 581
PaeI GCATGC 1 cut(s) 404
PagI TCATGA 2 cut(s) 312, 907
PctI GAATGC 1 cut(s) 299
PfeI GAWTC 2 cut(s) 82, 592
PflFI GACNNNGTC 1 cut(s) 819
PflMI CCANNNNNTGG 1 cut(s) 547
PfoI TCCNGGA 1 cut(s) 1096
PkrI GCNGC 5 cut(s) 298, 658, 843, 885, 925
PleI GAGTC 1 cut(s) 1008
PpsI GAGTC 1 cut(s) 1008
Psp6I CCWGG 2 cut(s) 677, 1096
PspGI CCWGG 2 cut(s) 677, 1096
PspN4I GGNNCC 4 cut(s) 49, 203, 537, 970
PsuI RGATCY 3 cut(s) 201, 307, 535
PsyI GACNNNGTC 1 cut(s) 819
PvuII CAGCTG 1 cut(s) 142
RseI CAYNNNNRTG 1 cut(s) 581
SacII CCGCGG 1 cut(s) 297
SaqAI TTAA 4 cut(s) 33, 690, 1032, 1061
SatI GCNGC 5 cut(s) 297, 657, 842, 884, 924
SchI GAGTC 1 cut(s) 1009
ScrFI CCNGG 2 cut(s) 679, 1098
SduI GDGCHC 2 cut(s) 19, 757
SfaNI GCATC 5 cut(s) 258, 418, 796, 828, 1111
Sfr303I CCGCGG 1 cut(s) 297
SgrBI CCGCGG 1 cut(s) 297
SmiMI CAYNNNNRTG 1 cut(s) 581
SmlI CTYRAG 2 cut(s) 382, 941
SmoI CTYRAG 2 cut(s) 382, 941
SphI GCATGC 1 cut(s) 404
Sse9I AATT 6 cut(s) 562, 721, 731, 739, 875, 895
SsiI CCGC 6 cut(s) 199, 294, 296, 427, 884, 1178
SspI AATATT 1 cut(s) 423
SspMI CTAG 4 cut(s) 482, 813, 824, 870
StyD4I CCNGG 2 cut(s) 677, 1096
StyI CCWWGG 1 cut(s) 8
TaaI ACNGT 2 cut(s) 94, 583
TaiI ACGT 1 cut(s) 820
TaqI TCGA 4 cut(s) 123, 560, 850, 1132
TaqII GACCGA 1 cut(s) 225
TasI AATT 6 cut(s) 562, 721, 731, 739, 875, 895
TauI GCSGC 2 cut(s) 299, 886
TfiI GAWTC 2 cut(s) 82, 592
Tru1I TTAA 4 cut(s) 33, 690, 1032, 1061
Tru9I TTAA 4 cut(s) 33, 690, 1032, 1061
TscAI CASTG 5 cut(s) 27, 99, 561, 586, 716
TseFI GTSAC 3 cut(s) 88, 237, 583
TseI GCWGC 3 cut(s) 656, 841, 923
Tsp45I GTSAC 3 cut(s) 88, 237, 583
TspDTI ATGAA 4 cut(s) 292, 329, 349, 1070
TspGWI ACGGA 2 cut(s) 99, 602
TspRI CASTG 5 cut(s) 27, 99, 561, 586, 716
Tth111I GACNNNGTC 1 cut(s) 819
Van91I CCANNNNNTGG 1 cut(s) 547
XapI RAATTY 1 cut(s) 721
XbaI TCTAGA 1 cut(s) 812
XceI RCATGY 1 cut(s) 404
XspI CTAG 4 cut(s) 482, 813, 824, 870
Zsp2I ATGCAT 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.