RchiOBHm_Chr3g0493771

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000094
Physical Location & Seq
Reverse (-)
41240227 .. 41241370
1144 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45649

Sequence Viewer

Length: 1083 bp
ATGACCCAGCAGGAGGGTCGCACTGCACCGAACGTCATTATGGGTATGTTAATTGTTTTTGGTCAACCAGCTTTCATTTTGATTGATCCTGGAGCCTCTCACTCCTTTATGTCTAAGAGGTTTTCTTTCTTTGCTAATGTGCCCCCATCTCTCCTACTCGGAGAGTGGCATGTTGTTCTACCATCGGGGGAAAGACATAGAATTGAATGGGTACATCGTTTTTGTGGAGTGTTTGTAGAAGGAGTTTGCTTAGAGGCGGACTTGATTCCATTTGAGTTAGTGGAGTTTGATGTAATCCTAGGGATGGATTTCCTACGGATGCATCATGCCTTAGTGGATTTCTTTTGTAGTACTGTATTATTTCGGAGTCTGGGTAAGCCAGTTGTCACCTTTTATGGTGAACGGGAGGTTCTCCCATCTTGCATAATCTCAGCTTTAACTGCTAAGAAGATGTTGAGTAAGGGTTGCCAAGCTTATTTGGCACATGTGGTGAATTCAAATGCCGAAGTTATGGATCTTAGCCAAATTCCTGTTGTTGGTGACTATCCAGATGTATTTCCAGAAGAATTGCCTGGATTGCCCCCGGTGCGAGAGATAGACTTTACCATTGATTTACTTCCAGGTACAACACCCATCTCTCAAGCACCTTATAGAATGGCACCGGCGGAACTGAAGGAGTTGTATGTACAGTTGCAGGAGTTAACGGATAAGGGATTTATACGACCTAGTGTATCTCCCTGGGGTGCACTTGTGTTGTTTGTGAAGAAGAAAGATGGTACTTTGAGGCTTTGTATTGATTACCGGAAACTAAACAGGGTGACTATAAGGAATAAATATCCCTTGCCCCGCATTGATGATTTGTTTGACCAGTTGAGGGGTGCTAAAGTTTTCTCAAAGATTGATTTGAGGTCTGGTTATCATCAGTTACGGATTAAAGAGGAGGATGTAGCCAAAACTGCTTTTCGATCACGTTATGGTCATTATGAGTTCCTTGTTATGCCTTTTGGGTTGACTAATGCACCCGCTGCTTTCATGGATCTCATGAACAGGGTGTTTCGCCCGAGTTACATGCTGAGCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2 RVT_1 Retrotrans_gag rve zf-CCHC

Protein Analysis

360

Amino Acids

40.84

Weight (kDa)

7.11

Isoelectric Point (pI)

46.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVP_2 PF08284 2 - 122 9.9e-23 Retroviral aspartyl protease
RVT_1 PF00078 254 - 354 3.5e-20 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42190
fragaria_vesca FvH4_1g22371 FvH4_1g23261 FvH4_1g27933 FvH4_1g27934 FvH4_1g29231 FvH4_2g02781 FvH4_2g08031 FvH4_2g08581 FvH4_3g06961 FvH4_3g06962 FvH4_3g13531 FvH4_3g14391 FvH4_3g14392 FvH4_3g18622 FvH4_3g18964 FvH4_3g26314 FvH4_3g28781 FvH4_3g30771 FvH4_3g30772 FvH4_3g31752 FvH4_3g32803 FvH4_3g35751 FvH4_3g35752 FvH4_4g02151 FvH4_4g02642 FvH4_4g05523 FvH4_4g05524 FvH4_4g06574 FvH4_4g06722 FvH4_4g08644 FvH4_4g08645 FvH4_4g08646 FvH4_4g08851 FvH4_4g08971 FvH4_4g09081 FvH4_4g09243 FvH4_4g09244 FvH4_4g09283 FvH4_4g10021 FvH4_4g10032 FvH4_4g10033 FvH4_4g10182 FvH4_4g10361 FvH4_4g12502 FvH4_4g12503 FvH4_4g13341 FvH4_4g13942 FvH4_4g13943 FvH4_4g13944 FvH4_4g14432 FvH4_4g14822 FvH4_4g14823 FvH4_4g15291 FvH4_4g15292 FvH4_4g15293 FvH4_4g15471 FvH4_4g15583 FvH4_4g15584 FvH4_4g15585 FvH4_4g15586 FvH4_4g15587 FvH4_4g15591 FvH4_4g15592 FvH4_4g15593 FvH4_4g16179 FvH4_4g18131 FvH4_4g21031 FvH4_4g22021 FvH4_4g22021 FvH4_4g22042 FvH4_5g03402 FvH4_5g07411 FvH4_5g13881 FvH4_5g15792 FvH4_5g24682 FvH4_5g24911 FvH4_5g25322 FvH4_5g25641 FvH4_5g36692 FvH4_5g38072 FvH4_5g38171 FvH4_6g05202 FvH4_6g08531 FvH4_6g16342 FvH4_6g21771 FvH4_6g23303 FvH4_6g23961 FvH4_6g25381 FvH4_6g27021 FvH4_6g27022 FvH4_6g30091 FvH4_6g30092 FvH4_7g02051 FvH4_7g06031 FvH4_7g07031 FvH4_7g07581 FvH4_7g08381 FvH4_7g11551 FvH4_7g19711 FvH4_7g25621 FvH4_7g29722
malus_domestica MD06G1134500.v1.1 MD09G1067600.v1.1 MD13G1145500.v1.1 MD15G1166500.v1.1 MD16G1270000.v1.1
prunus_persica Prupe.7G030900_v2.0.a1
pyrus_communis pycom01g00710 pycom01g03760 pycom03g10770 pycom04g02180 pycom05g08050 pycom06g04140 pycom06g11110 pycom07g07550 pycom07g21570 pycom08g17240 pycom09g13900 pycom09g19570 pycom10g22300 pycom11g03210 pycom11g13750 pycom11g24890 pycom12561g00270 pycom12668g00020 pycom12g11280 pycom12g20720 pycom12g20730 pycom13g21410 pycom13g21660 pycom14g06010 pycom14g06370 pycom14g12800 pycom16g21440 pycom16g22530 pycom17g02030 pycom420g00170 pycom50g00020 pycom5153684g00110 pycom520g00860 pycom581g00060
rosa_chinensis RchiOBHm_Chr0c08g0498091 RchiOBHm_Chr0c08g0498101 RchiOBHm_Chr1g0326991 RchiOBHm_Chr2g0084311 RchiOBHm_Chr2g0090701 RchiOBHm_Chr2g0098591 RchiOBHm_Chr2g0109491 RchiOBHm_Chr2g0109501 RchiOBHm_Chr2g0130801 RchiOBHm_Chr2g0145931 RchiOBHm_Chr2g0168091 RchiOBHm_Chr3g0457081 RchiOBHm_Chr3g0457091 RchiOBHm_Chr3g0467781 RchiOBHm_Chr3g0467791 RchiOBHm_Chr3g0493771 RchiOBHm_Chr3g0494051 RchiOBHm_Chr3g0496881 RchiOBHm_Chr4g0401391 RchiOBHm_Chr4g0414861 RchiOBHm_Chr4g0424081 RchiOBHm_Chr5g0009611 RchiOBHm_Chr5g0049881 RchiOBHm_Chr5g0050351 RchiOBHm_Chr5g0053791 RchiOBHm_Chr5g0078031 RchiOBHm_Chr6g0256481 RchiOBHm_Chr6g0271231 RchiOBHm_Chr6g0286381 RchiOBHm_Chr7g0197101 RchiOBHm_Chr7g0221891 RchiOBHm_Chr7g0237801 RchiOBHm_Chr7g0237821
rosa_multiflora Rmu_sc0000509.1_g000034 Rmu_sc0004751.1_g000014 Rmu_sc0008546.1_g000002 Rmu_sc0009320.1_g000003 Rmu_sc0010661.1_g000006 Rmu_sc0029652.1_g000002
rosa_roxburghii Rroxscaffold_10G00433150 Rroxscaffold_15G00447630 Rroxscaffold_26G00447790 Rroxscaffold_29G00441810 Rroxscaffold_32G00442860 Rroxscaffold_33G00439800 Rroxscaffold_34G00443230 Rroxscaffold_3G00220560 Rroxscaffold_3G00227370 Rroxscaffold_3G00239080 Rroxscaffold_3G00239090 Rroxscaffold_3G00273190 Rroxscaffold_4G00323530 Rroxscaffold_4G00326840 Rroxscaffold_57G00443110 Rroxscaffold_5G00338590 Rroxscaffold_5G00347530 Rroxscaffold_68G00446990 Rroxscaffold_76G00448570 Rroxscaffold_90G00448860
rosa_rugosa Rorug06G0233600
rosa_samantha Rh3CG302700 Rh6DG286700
rosa_wichuraiana Rw0G002280 Rw0G004080 Rw0G011830 Rw1G003690 Rw1G008800 Rw1G009130 Rw1G009140 Rw1G009150 Rw1G009160 Rw1G009410 Rw1G009580 Rw1G012770 Rw1G015850 Rw1G026860 Rw2G003780 Rw2G006480 Rw2G016520 Rw2G016960 Rw2G018170 Rw2G025180 Rw2G025510 Rw2G025610 Rw2G025750 Rw2G025920 Rw2G029950 Rw2G046360 Rw2G046370 Rw2G046380 Rw3G009070 Rw3G025820 Rw3G027340 Rw3G027900 Rw3G028150 Rw3G029060 Rw4G002440 Rw4G005960 Rw4G007520 Rw4G011970 Rw4G011980 Rw4G012190 Rw4G012530 Rw4G018490 Rw4G026380 Rw5G003970 Rw5G030920 Rw5G031780 Rw5G031900 Rw5G033030 Rw5G033040 Rw5G036330 Rw5G039730 Rw5G048110 Rw6G006670 Rw6G007910 Rw6G009720 Rw6G010990 Rw6G012930 Rw6G012940 Rw6G013420 Rw6G014690 Rw6G015290 Rw6G015790 Rw6G015920 Rw6G036510 Rw7G016650 Rw7G023140 Rw7G028650 Rw7G036450 Rw7G036460 Rw7G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 658
AciI CCGC 4 cut(s) 257, 665, 847, 1023
AclWI GGATC 3 cut(s) 80, 522, 1044
AcsI RAATTY 2 cut(s) 493, 525
AcuI CTGAAG 1 cut(s) 692
AfaI GTAC 5 cut(s) 213, 352, 625, 687, 778
AfiI CCNNNNNNNGG 4 cut(s) 13, 304, 536, 874
AflIII ACRYGT 1 cut(s) 484
AgsI TTSAA 2 cut(s) 206, 498
AjnI CCWGG 4 cut(s) 88, 571, 619, 737
AluBI AGCT 3 cut(s) 71, 434, 473
AluI AGCT 3 cut(s) 71, 434, 473
Alw21I GWGCWC 2 cut(s) 748, 1079
Alw44I GTGCAC 1 cut(s) 744
AlwI GGATC 3 cut(s) 80, 522, 1044
Ama87I CYCGRG 1 cut(s) 1060
ApaLI GTGCAC 1 cut(s) 744
ApeKI GCWGC 1 cut(s) 1025
ApoI RAATTY 2 cut(s) 493, 525
AspA2I CCTAGG 1 cut(s) 298
AsuC2I CCSGG 1 cut(s) 584
AsuHPI GGTGA 5 cut(s) 379, 410, 502, 551, 829
AvaI CYCGRG 1 cut(s) 1060
AvrII CCTAGG 1 cut(s) 298
BaeGI GKGCMC 2 cut(s) 144, 748
BanI GGYRCC 1 cut(s) 658
Bbv12I GWGCWC 2 cut(s) 748, 1079
BbvI GCAGC 1 cut(s) 1012
BccI CCATC 6 cut(s) 154, 190, 298, 424, 641, 767
BcgI CGANNNNNNTGC 2 cut(s) 33, 1051
BciT130I CCWGG 4 cut(s) 90, 573, 621, 739
BcnI CCSGG 1 cut(s) 584
BfaI CTAG 2 cut(s) 299, 726
BisI GCNGC 1 cut(s) 1026
BlnI CCTAGG 1 cut(s) 298
BlpI GCTNAGC 1 cut(s) 1073
BlsI GCNGC 1 cut(s) 1027
BmcAI AGTACT 1 cut(s) 352
Bme1390I CCNGG 5 cut(s) 90, 573, 584, 621, 739
BmeT110I CYCGRG 1 cut(s) 1060
BmiI GGNNCC 2 cut(s) 94, 660
BmrFI CCNGG 5 cut(s) 90, 573, 584, 621, 739
BmsI GCATC 2 cut(s) 309, 331
BpmI CTGGAG 1 cut(s) 111
Bpu1102I GCTNAGC 1 cut(s) 1073
BpuEI CTTGAG 1 cut(s) 624
BpuMI CCSGG 1 cut(s) 584
BsaJI CCNNGG 4 cut(s) 298, 582, 737, 738
BsaWI WCCGGW 1 cut(s) 801
BsaXI ACNNNNNCTCC 4 cut(s) 219, 249, 358, 388
Bsc4I CCNNNNNNNGG 4 cut(s) 13, 304, 536, 874
Bse118I RCCGGY 1 cut(s) 661
Bse1I ACTGG 2 cut(s) 380, 868
BseBI CCWGG 4 cut(s) 90, 573, 621, 739
BseDI CCNNGG 4 cut(s) 298, 582, 737, 738
BseGI GGATG 3 cut(s) 309, 324, 949
BseLI CCNNNNNNNGG 4 cut(s) 13, 304, 536, 874
BseMII CTCAG 2 cut(s) 444, 1064
BseNI ACTGG 2 cut(s) 380, 868
BseRI GAGGAG 1 cut(s) 953
BseSI GKGCMC 2 cut(s) 144, 748
BseXI GCAGC 1 cut(s) 1012
BseYI CCCAGC 1 cut(s) 6
BsgI GTGCAG 1 cut(s) 9
BshNI GGYRCC 1 cut(s) 658
BsiHKAI GWGCWC 2 cut(s) 748, 1079
BsiHKCI CYCGRG 1 cut(s) 1060
BsiSI CCGG 3 cut(s) 584, 662, 802
BslI CCNNNNNNNGG 4 cut(s) 13, 304, 536, 874
BsoBI CYCGRG 1 cut(s) 1060
Bsp1286I GDGCHC 3 cut(s) 144, 748, 1079
Bsp1407I TGTACA 1 cut(s) 685
Bsp143I GATC 4 cut(s) 85, 514, 965, 1036
Bsp1720I GCTNAGC 1 cut(s) 1073
BspACI CCGC 4 cut(s) 257, 665, 847, 1023
BspCNI CTCAG 2 cut(s) 443, 1065
BspHI TCATGA 1 cut(s) 1041
BspLI GGNNCC 2 cut(s) 94, 660
BspPI GGATC 3 cut(s) 80, 522, 1044
BspT107I GGYRCC 1 cut(s) 658
BsrFI RCCGGY 1 cut(s) 661
BsrGI TGTACA 1 cut(s) 685
BsrI ACTGG 2 cut(s) 380, 868
BssAI RCCGGY 1 cut(s) 661
BssECI CCNNGG 4 cut(s) 298, 582, 737, 738
BssMI GATC 4 cut(s) 85, 514, 965, 1036
BssT1I CCWWGG 1 cut(s) 298
Bst2UI CCWGG 4 cut(s) 90, 573, 621, 739
Bst4CI ACNGT 2 cut(s) 355, 690
BstAPI GCANNNNNTGC 1 cut(s) 1025
BstAUI TGTACA 1 cut(s) 685
BstDEI CTNAG 7 cut(s) 114, 250, 331, 430, 444, 518, 1073
BstF5I GGATG 3 cut(s) 309, 324, 949
BstKTI GATC 4 cut(s) 88, 517, 968, 1039
BstMBI GATC 4 cut(s) 85, 514, 965, 1036
BstMWI GCNNNNNNNGC 6 cut(s) 440, 479, 577, 586, 956, 1025
BstNI CCWGG 4 cut(s) 90, 573, 621, 739
BstNSI RCATGY 3 cut(s) 173, 488, 1072
BstSCI CCNGG 5 cut(s) 88, 571, 582, 619, 737
BstSLI GKGCMC 2 cut(s) 144, 748
BstV1I GCAGC 1 cut(s) 1012
BstX2I RGATCY 2 cut(s) 514, 1036
BstYI RGATCY 2 cut(s) 514, 1036
BtsCI GGATG 3 cut(s) 309, 324, 949
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 1 cut(s) 21
CciI TCATGA 1 cut(s) 1041
Cfr10I RCCGGY 1 cut(s) 661
Csp6I GTAC 5 cut(s) 212, 351, 624, 686, 777
CviAII CATG 6 cut(s) 170, 326, 485, 1033, 1042, 1069
CviJI RGCY 8 cut(s) 71, 95, 379, 434, 473, 522, 787, 950
CviKI_1 RGCY 8 cut(s) 71, 95, 379, 434, 473, 522, 787, 950
CviQI GTAC 5 cut(s) 212, 351, 624, 686, 777
DdeI CTNAG 7 cut(s) 114, 250, 331, 430, 444, 518, 1073
DpnI GATC 4 cut(s) 87, 516, 967, 1038
DpnII GATC 4 cut(s) 85, 514, 965, 1036
EciI GGCGGA 2 cut(s) 272, 680
Eco130I CCWWGG 1 cut(s) 298
Eco57I CTGAAG 1 cut(s) 692
Eco88I CYCGRG 1 cut(s) 1060
EcoRI GAATTC 1 cut(s) 493
EcoRII CCWGG 4 cut(s) 88, 571, 619, 737
EcoT14I CCWWGG 1 cut(s) 298
EcoT22I ATGCAT 1 cut(s) 324
ErhI CCWWGG 1 cut(s) 298
FaeI CATG 6 cut(s) 173, 329, 488, 1036, 1045, 1072
FatI CATG 6 cut(s) 169, 325, 484, 1032, 1041, 1068
FauI CCCGC 2 cut(s) 854, 1030
Fnu4HI GCNGC 1 cut(s) 1026
FokI GGATG 3 cut(s) 316, 331, 956
Fsp4HI GCNGC 1 cut(s) 1026
FspBI CTAG 2 cut(s) 299, 726
GluI GCNGC 1 cut(s) 1026
GsaI CCCAGC 1 cut(s) 10
GsuI CTGGAG 1 cut(s) 111
HapII CCGG 3 cut(s) 584, 662, 802
Hin1II CATG 6 cut(s) 173, 329, 488, 1036, 1045, 1072
HincII GTYRAC 3 cut(s) 65, 702, 1011
HindII GTYRAC 3 cut(s) 65, 702, 1011
HindIII AAGCTT 1 cut(s) 471
HinfI GANTC 2 cut(s) 265, 367
HpaI GTTAAC 1 cut(s) 702
HpaII CCGG 3 cut(s) 584, 662, 802
HphI GGTGA 5 cut(s) 379, 410, 502, 551, 829
Hpy166II GTNNAC 5 cut(s) 65, 401, 702, 746, 1011
Hpy188I TCNGA 2 cut(s) 161, 366
Hpy188III TCNNGA 3 cut(s) 548, 560, 1042
Hpy8I GTNNAC 5 cut(s) 65, 401, 702, 746, 1011
HpyAV CCTTC 2 cut(s) 233, 667
HpyCH4III ACNGT 2 cut(s) 355, 690
HpyCH4IV ACGT 2 cut(s) 33, 970
HpyCH4V TGCA 6 cut(s) 26, 322, 423, 694, 746, 1019
HpyF10VI GCNNNNNNNGC 6 cut(s) 440, 479, 577, 586, 956, 1025
HpyF3I CTNAG 7 cut(s) 114, 250, 331, 430, 444, 518, 1073
HpySE526I ACGT 2 cut(s) 33, 970
Hsp92II CATG 6 cut(s) 173, 329, 488, 1036, 1045, 1072
KspAI GTTAAC 1 cut(s) 702
Kzo9I GATC 4 cut(s) 85, 514, 965, 1036
LmnI GCTCC 1 cut(s) 92
Lsp1109I GCAGC 1 cut(s) 1012
LweI GCATC 2 cut(s) 309, 331
MaeI CTAG 2 cut(s) 299, 726
MaeII ACGT 2 cut(s) 33, 970
MaeIII GTNAC 5 cut(s) 385, 539, 817, 924, 1064
MalI GATC 4 cut(s) 87, 516, 967, 1038
MboI GATC 4 cut(s) 85, 514, 965, 1036
MboII GAAGA 4 cut(s) 460, 575, 775, 778
MflI RGATCY 2 cut(s) 514, 1036
MhlI GDGCHC 3 cut(s) 144, 748, 1079
MluCI AATT 5 cut(s) 51, 201, 493, 525, 566
MlyI GAGTC 1 cut(s) 376
Mph1103I ATGCAT 1 cut(s) 324
MseI TTAA 4 cut(s) 50, 437, 701, 933
MspA1I CMGCKG 1 cut(s) 1025
MspI CCGG 3 cut(s) 584, 662, 802
MspR9I CCNGG 5 cut(s) 90, 573, 584, 621, 739
MvaI CCWGG 4 cut(s) 90, 573, 621, 739
MwoI GCNNNNNNNGC 6 cut(s) 440, 479, 577, 586, 956, 1025
NciI CCSGG 1 cut(s) 584
NdeII GATC 4 cut(s) 85, 514, 965, 1036
NlaIII CATG 6 cut(s) 173, 329, 488, 1036, 1045, 1072
NlaIV GGNNCC 2 cut(s) 94, 660
NmuCI GTSAC 3 cut(s) 385, 539, 817
NsiI ATGCAT 1 cut(s) 324
NspI RCATGY 3 cut(s) 173, 488, 1072
PagI TCATGA 1 cut(s) 1041
PasI CCCWGGG 1 cut(s) 738
PciI ACATGT 1 cut(s) 484
PfeI GAWTC 1 cut(s) 265
PfoI TCCNGGA 1 cut(s) 88
PkrI GCNGC 1 cut(s) 1027
PleI GAGTC 1 cut(s) 375
PpsI GAGTC 1 cut(s) 375
PscI ACATGT 1 cut(s) 484
Psp6I CCWGG 4 cut(s) 88, 571, 619, 737
PspFI CCCAGC 1 cut(s) 6
PspGI CCWGG 4 cut(s) 88, 571, 619, 737
PspN4I GGNNCC 2 cut(s) 94, 660
PsuI RGATCY 2 cut(s) 514, 1036
RsaI GTAC 5 cut(s) 213, 352, 625, 687, 778
RsaNI GTAC 5 cut(s) 212, 351, 624, 686, 777
SaqAI TTAA 4 cut(s) 50, 437, 701, 933
SatI GCNGC 1 cut(s) 1026
Sau3AI GATC 4 cut(s) 85, 514, 965, 1036
ScaI AGTACT 1 cut(s) 352
SchI GAGTC 1 cut(s) 376
ScrFI CCNGG 5 cut(s) 90, 573, 584, 621, 739
SduI GDGCHC 3 cut(s) 144, 748, 1079
SfaNI GCATC 2 cut(s) 309, 331
SgrAI CRCCGGYG 1 cut(s) 661
SmlI CTYRAG 1 cut(s) 639
SmoI CTYRAG 1 cut(s) 639
Sse9I AATT 5 cut(s) 51, 201, 493, 525, 566
SsiI CCGC 4 cut(s) 257, 665, 847, 1023
SspMI CTAG 2 cut(s) 299, 726
StyD4I CCNGG 5 cut(s) 88, 571, 582, 619, 737
StyI CCWWGG 1 cut(s) 298
TaaI ACNGT 2 cut(s) 355, 690
TaiI ACGT 2 cut(s) 36, 973
TaqI TCGA 1 cut(s) 964
TasI AATT 5 cut(s) 51, 201, 493, 525, 566
TatI WGTACW 2 cut(s) 350, 685
TfiI GAWTC 1 cut(s) 265
Tru1I TTAA 4 cut(s) 50, 437, 701, 933
Tru9I TTAA 4 cut(s) 50, 437, 701, 933
TscAI CASTG 1 cut(s) 28
TseFI GTSAC 3 cut(s) 385, 539, 817
TseI GCWGC 1 cut(s) 1025
Tsp45I GTSAC 3 cut(s) 385, 539, 817
TspDTI ATGAA 3 cut(s) 64, 1021, 1058
TspGWI ACGGA 3 cut(s) 331, 719, 943
TspRI CASTG 1 cut(s) 28
VneI GTGCAC 1 cut(s) 744
XapI RAATTY 2 cut(s) 493, 525
XceI RCATGY 3 cut(s) 173, 488, 1072
XmaJI CCTAGG 1 cut(s) 298
XspI CTAG 2 cut(s) 299, 726
ZrmI AGTACT 1 cut(s) 352
Zsp2I ATGCAT 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.