transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 223 |
| AciI | CCGC | 6 cut(s) | 10, 28, 56, 74, 127, 311 |
| AclWI | GGATC | 1 cut(s) | 278 |
| AcsI | RAATTY | 1 cut(s) | 400 |
| AcuI | CTGAAG | 1 cut(s) | 119 |
| AcvI | CACGTG | 2 cut(s) | 256, 295 |
| AfaI | GTAC | 2 cut(s) | 96, 161 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 42, 116 |
| AflIII | ACRYGT | 1 cut(s) | 255 |
| AgeI | ACCGGT | 1 cut(s) | 349 |
| AgsI | TTSAA | 2 cut(s) | 24, 70 |
| AluBI | AGCT | 3 cut(s) | 103, 203, 443 |
| AluI | AGCT | 3 cut(s) | 103, 203, 443 |
| Alw26I | GTCTC | 1 cut(s) | 446 |
| AlwI | GGATC | 1 cut(s) | 278 |
| Aor13HI | TCCGGA | 1 cut(s) | 223 |
| AoxI | GGCC | 2 cut(s) | 33, 79 |
| ApoI | RAATTY | 1 cut(s) | 400 |
| AsiGI | ACCGGT | 1 cut(s) | 349 |
| AspA2I | CCTAGG | 1 cut(s) | 155 |
| AspS9I | GGNCC | 1 cut(s) | 167 |
| AsuC2I | CCSGG | 3 cut(s) | 37, 83, 484 |
| AsuHPI | GGTGA | 4 cut(s) | 99, 172, 206, 364 |
| AvaII | GGWCC | 1 cut(s) | 167 |
| AvrII | CCTAGG | 1 cut(s) | 155 |
| BbrPI | CACGTG | 2 cut(s) | 256, 295 |
| BccI | CCATC | 1 cut(s) | 295 |
| BciVI | GTATCC | 1 cut(s) | 489 |
| BcnI | CCSGG | 3 cut(s) | 37, 83, 484 |
| BcoDI | GTCTC | 1 cut(s) | 446 |
| BfaI | CTAG | 3 cut(s) | 156, 234, 502 |
| BfuI | GTATCC | 1 cut(s) | 489 |
| BglII | AGATCT | 1 cut(s) | 328 |
| BlnI | CCTAGG | 1 cut(s) | 155 |
| BmcAI | AGTACT | 1 cut(s) | 96 |
| Bme1390I | CCNGG | 3 cut(s) | 37, 83, 484 |
| Bme18I | GGWCC | 1 cut(s) | 167 |
| BmgT120I | GGNCC | 1 cut(s) | 167 |
| BmiI | GGNNCC | 2 cut(s) | 348, 425 |
| BmrFI | CCNGG | 3 cut(s) | 37, 83, 484 |
| BpuEI | CTTGAG | 1 cut(s) | 335 |
| BpuMI | CCSGG | 3 cut(s) | 37, 83, 484 |
| BsaAI | YACGTR | 3 cut(s) | 256, 295, 447 |
| BsaBI | GATNNNNATC | 1 cut(s) | 477 |
| BsaJI | CCNNGG | 3 cut(s) | 110, 155, 482 |
| BsaWI | WCCGGW | 2 cut(s) | 223, 349 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 42, 116 |
| Bse118I | RCCGGY | 1 cut(s) | 349 |
| Bse8I | GATNNNNATC | 1 cut(s) | 477 |
| BseAI | TCCGGA | 1 cut(s) | 223 |
| BseDI | CCNNGG | 3 cut(s) | 110, 155, 482 |
| BseGI | GGATG | 2 cut(s) | 91, 471 |
| BseJI | GATNNNNATC | 1 cut(s) | 477 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 42, 116 |
| BseMII | CTCAG | 1 cut(s) | 140 |
| BseRI | GAGGAG | 1 cut(s) | 294 |
| BshFI | GGCC | 2 cut(s) | 35, 81 |
| BshTI | ACCGGT | 1 cut(s) | 349 |
| BsiSI | CCGG | 5 cut(s) | 36, 82, 224, 350, 484 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 42, 116 |
| BsmAI | GTCTC | 1 cut(s) | 446 |
| BsmI | GAATGC | 1 cut(s) | 52 |
| BsnI | GGCC | 2 cut(s) | 35, 81 |
| Bsp13I | TCCGGA | 1 cut(s) | 223 |
| Bsp143I | GATC | 4 cut(s) | 283, 328, 357, 460 |
| BspACI | CCGC | 6 cut(s) | 10, 28, 56, 74, 127, 311 |
| BspANI | GGCC | 2 cut(s) | 35, 81 |
| BspCNI | CTCAG | 1 cut(s) | 141 |
| BspEI | TCCGGA | 1 cut(s) | 223 |
| BspLI | GGNNCC | 2 cut(s) | 348, 425 |
| BspPI | GGATC | 1 cut(s) | 278 |
| BsrFI | RCCGGY | 1 cut(s) | 349 |
| BssAI | RCCGGY | 1 cut(s) | 349 |
| BssECI | CCNNGG | 3 cut(s) | 110, 155, 482 |
| BssMI | GATC | 4 cut(s) | 283, 328, 357, 460 |
| BssT1I | CCWWGG | 1 cut(s) | 155 |
| Bst4CI | ACNGT | 3 cut(s) | 94, 111, 397 |
| BstBAI | YACGTR | 3 cut(s) | 256, 295, 447 |
| BstDEI | CTNAG | 1 cut(s) | 149 |
| BstDSI | CCRYGG | 1 cut(s) | 110 |
| BstEII | GGTNACC | 1 cut(s) | 178 |
| BstF5I | GGATG | 2 cut(s) | 91, 471 |
| BstKTI | GATC | 4 cut(s) | 286, 331, 360, 463 |
| BstMAI | GTCTC | 1 cut(s) | 446 |
| BstMBI | GATC | 4 cut(s) | 283, 328, 357, 460 |
| BstPI | GGTNACC | 1 cut(s) | 178 |
| BstSCI | CCNGG | 3 cut(s) | 35, 81, 482 |
| BstX2I | RGATCY | 1 cut(s) | 328 |
| BstYI | RGATCY | 1 cut(s) | 328 |
| BsuI | GTATCC | 1 cut(s) | 489 |
| BsuRI | GGCC | 2 cut(s) | 35, 81 |
| BtgI | CCRYGG | 1 cut(s) | 110 |
| BtsCI | GGATG | 2 cut(s) | 91, 471 |
| BtsIMutI | CAGTG | 1 cut(s) | 402 |
| Cfr10I | RCCGGY | 1 cut(s) | 349 |
| Cfr13I | GGNCC | 1 cut(s) | 167 |
| Csp6I | GTAC | 2 cut(s) | 95, 160 |
| CspAI | ACCGGT | 1 cut(s) | 349 |
| CviAII | CATG | 1 cut(s) | 175 |
| CviJI | RGCY | 6 cut(s) | 35, 81, 103, 203, 233, 443 |
| CviKI_1 | RGCY | 6 cut(s) | 35, 81, 103, 203, 233, 443 |
| CviQI | GTAC | 2 cut(s) | 95, 160 |
| DdeI | CTNAG | 1 cut(s) | 149 |
| DpnI | GATC | 4 cut(s) | 285, 330, 359, 462 |
| DpnII | GATC | 4 cut(s) | 283, 328, 357, 460 |
| Eco130I | CCWWGG | 1 cut(s) | 155 |
| Eco47I | GGWCC | 1 cut(s) | 167 |
| Eco57I | CTGAAG | 1 cut(s) | 119 |
| Eco72I | CACGTG | 2 cut(s) | 256, 295 |
| Eco91I | GGTNACC | 1 cut(s) | 178 |
| EcoO65I | GGTNACC | 1 cut(s) | 178 |
| EcoT14I | CCWWGG | 1 cut(s) | 155 |
| ErhI | CCWWGG | 1 cut(s) | 155 |
| FaeI | CATG | 1 cut(s) | 178 |
| FaiI | YATR | 6 cut(s) | 172, 176, 243, 263, 276, 339 |
| FatI | CATG | 1 cut(s) | 174 |
| FauI | CCCGC | 2 cut(s) | 21, 67 |
| FokI | GGATG | 2 cut(s) | 98, 478 |
| FspBI | CTAG | 3 cut(s) | 156, 234, 502 |
| HaeIII | GGCC | 2 cut(s) | 35, 81 |
| HapII | CCGG | 5 cut(s) | 36, 82, 224, 350, 484 |
| Hin1II | CATG | 1 cut(s) | 178 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 1 cut(s) | 151 |
| HpaII | CCGG | 5 cut(s) | 36, 82, 224, 350, 484 |
| HphI | GGTGA | 4 cut(s) | 99, 172, 206, 364 |
| Hpy188I | TCNGA | 5 cut(s) | 134, 167, 269, 333, 465 |
| Hpy188III | TCNNGA | 1 cut(s) | 224 |
| HpyAV | CCTTC | 3 cut(s) | 133, 370, 403 |
| HpyCH4III | ACNGT | 3 cut(s) | 94, 111, 397 |
| HpyCH4IV | ACGT | 4 cut(s) | 255, 294, 335, 446 |
| HpyCH4V | TGCA | 1 cut(s) | 241 |
| HpyF3I | CTNAG | 1 cut(s) | 149 |
| HpySE526I | ACGT | 4 cut(s) | 255, 294, 335, 446 |
| Hsp92II | CATG | 1 cut(s) | 178 |
| Kpn2I | TCCGGA | 1 cut(s) | 223 |
| Kzo9I | GATC | 4 cut(s) | 283, 328, 357, 460 |
| LmnI | GCTCC | 1 cut(s) | 270 |
| LpnPI | CCDG | 7 cut(s) | 49, 95, 193, 237, 339, 363, 497 |
| MaeI | CTAG | 3 cut(s) | 156, 234, 502 |
| MaeII | ACGT | 4 cut(s) | 255, 294, 335, 446 |
| MaeIII | GTNAC | 3 cut(s) | 88, 178, 352 |
| MalI | GATC | 4 cut(s) | 285, 330, 359, 462 |
| MboI | GATC | 4 cut(s) | 283, 328, 357, 460 |
| MboII | GAAGA | 3 cut(s) | 12, 58, 470 |
| MflI | RGATCY | 1 cut(s) | 328 |
| MluCI | AATT | 1 cut(s) | 400 |
| MlyI | GAGTC | 1 cut(s) | 160 |
| MmeI | TCCRAC | 2 cut(s) | 192, 292 |
| MroI | TCCGGA | 1 cut(s) | 223 |
| MseI | TTAA | 2 cut(s) | 321, 495 |
| MspI | CCGG | 5 cut(s) | 36, 82, 224, 350, 484 |
| MspR9I | CCNGG | 3 cut(s) | 37, 83, 484 |
| Mva1269I | GAATGC | 1 cut(s) | 52 |
| NciI | CCSGG | 3 cut(s) | 37, 83, 484 |
| NdeII | GATC | 4 cut(s) | 283, 328, 357, 460 |
| NlaIII | CATG | 1 cut(s) | 178 |
| NlaIV | GGNNCC | 2 cut(s) | 348, 425 |
| NmuCI | GTSAC | 3 cut(s) | 88, 178, 352 |
| PctI | GAATGC | 1 cut(s) | 52 |
| PinAI | ACCGGT | 1 cut(s) | 349 |
| PleI | GAGTC | 1 cut(s) | 159 |
| PmaCI | CACGTG | 2 cut(s) | 256, 295 |
| PmlI | CACGTG | 2 cut(s) | 256, 295 |
| PpsI | GAGTC | 1 cut(s) | 159 |
| Ppu21I | YACGTR | 3 cut(s) | 256, 295, 447 |
| PspCI | CACGTG | 2 cut(s) | 256, 295 |
| PspEI | GGTNACC | 1 cut(s) | 178 |
| PspN4I | GGNNCC | 2 cut(s) | 348, 425 |
| PspPI | GGNCC | 1 cut(s) | 167 |
| PsuI | RGATCY | 1 cut(s) | 328 |
| RsaI | GTAC | 2 cut(s) | 96, 161 |
| RsaNI | GTAC | 2 cut(s) | 95, 160 |
| SaqAI | TTAA | 2 cut(s) | 321, 495 |
| Sau3AI | GATC | 4 cut(s) | 283, 328, 357, 460 |
| Sau96I | GGNCC | 1 cut(s) | 167 |
| ScaI | AGTACT | 1 cut(s) | 96 |
| SchI | GAGTC | 1 cut(s) | 160 |
| ScrFI | CCNGG | 3 cut(s) | 37, 83, 484 |
| SinI | GGWCC | 1 cut(s) | 167 |
| SmlI | CTYRAG | 1 cut(s) | 314 |
| SmoI | CTYRAG | 1 cut(s) | 314 |
| Sse9I | AATT | 1 cut(s) | 400 |
| SsiI | CCGC | 6 cut(s) | 10, 28, 56, 74, 127, 311 |
| SspMI | CTAG | 3 cut(s) | 156, 234, 502 |
| StyD4I | CCNGG | 3 cut(s) | 35, 81, 482 |
| StyI | CCWWGG | 1 cut(s) | 155 |
| TaaI | ACNGT | 3 cut(s) | 94, 111, 397 |
| TaiI | ACGT | 4 cut(s) | 258, 297, 338, 449 |
| TasI | AATT | 1 cut(s) | 400 |
| TatI | WGTACW | 1 cut(s) | 94 |
| Tru1I | TTAA | 2 cut(s) | 321, 495 |
| Tru9I | TTAA | 2 cut(s) | 321, 495 |
| TscAI | CASTG | 1 cut(s) | 402 |
| TseFI | GTSAC | 3 cut(s) | 88, 178, 352 |
| Tsp45I | GTSAC | 3 cut(s) | 88, 178, 352 |
| TspRI | CASTG | 1 cut(s) | 402 |
| VpaK11BI | GGWCC | 1 cut(s) | 167 |
| XapI | RAATTY | 1 cut(s) | 400 |
| XmaJI | CCTAGG | 1 cut(s) | 155 |
| XspI | CTAG | 3 cut(s) | 156, 234, 502 |
| ZrmI | AGTACT | 1 cut(s) | 96 |