transposition, RNA-mediated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SH3_Tf2-1 | PF24626 | 69 - 133 | 6.1e-29 | Tf2-1-like, SH3 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 401, 475, 591 |
| AcsI | RAATTY | 1 cut(s) | 194 |
| AcuI | CTGAAG | 1 cut(s) | 242 |
| AfaI | GTAC | 4 cut(s) | 363, 398, 477, 504 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 51, 239, 514 |
| AflIII | ACRYGT | 1 cut(s) | 415 |
| AgsI | TTSAA | 3 cut(s) | 194, 200, 560 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 186, 218 |
| AluBI | AGCT | 3 cut(s) | 165, 428, 566 |
| AluI | AGCT | 3 cut(s) | 165, 428, 566 |
| Alw26I | GTCTC | 2 cut(s) | 127, 385 |
| AlwI | GGATC | 3 cut(s) | 401, 475, 591 |
| ApoI | RAATTY | 1 cut(s) | 194 |
| AspS9I | GGNCC | 3 cut(s) | 39, 83, 290 |
| AsuHPI | GGTGA | 3 cut(s) | 133, 218, 542 |
| AvaII | GGWCC | 3 cut(s) | 39, 83, 290 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 459, 491 |
| BceAI | ACGGC | 1 cut(s) | 159 |
| BciVI | GTATCC | 1 cut(s) | 612 |
| BclI | TGATCA | 1 cut(s) | 123 |
| BcoDI | GTCTC | 2 cut(s) | 127, 385 |
| BfuI | GTATCC | 1 cut(s) | 612 |
| BglII | AGATCT | 1 cut(s) | 451 |
| BmcAI | AGTACT | 1 cut(s) | 504 |
| Bme18I | GGWCC | 3 cut(s) | 39, 83, 290 |
| BmgT120I | GGNCC | 3 cut(s) | 39, 83, 290 |
| BmiI | GGNNCC | 4 cut(s) | 6, 41, 292, 576 |
| BmsI | GCATC | 1 cut(s) | 196 |
| BpuEI | CTTGAG | 2 cut(s) | 122, 342 |
| BsaJI | CCNNGG | 2 cut(s) | 233, 278 |
| BsaWI | WCCGGW | 1 cut(s) | 552 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 51, 239, 514 |
| Bse1I | ACTGG | 1 cut(s) | 473 |
| BseDI | CCNNGG | 2 cut(s) | 233, 278 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 51, 239, 514 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BseNI | ACTGG | 1 cut(s) | 473 |
| BsiSI | CCGG | 1 cut(s) | 553 |
| BslFI | GGGAC | 1 cut(s) | 276 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 51, 239, 514 |
| BsmAI | GTCTC | 2 cut(s) | 127, 385 |
| BsmFI | GGGAC | 1 cut(s) | 276 |
| Bsp143I | GATC | 7 cut(s) | 99, 123, 406, 451, 480, 487, 583 |
| BspCNI | CTCAG | 1 cut(s) | 79 |
| BspLI | GGNNCC | 4 cut(s) | 6, 41, 292, 576 |
| BspPI | GGATC | 3 cut(s) | 401, 475, 591 |
| BspQI | GCTCTTC | 1 cut(s) | 155 |
| BsrI | ACTGG | 1 cut(s) | 473 |
| BssECI | CCNNGG | 2 cut(s) | 233, 278 |
| BssMI | GATC | 7 cut(s) | 99, 123, 406, 451, 480, 487, 583 |
| BssT1I | CCWWGG | 2 cut(s) | 233, 278 |
| Bst4CI | ACNGT | 2 cut(s) | 33, 600 |
| Bst6I | CTCTTC | 1 cut(s) | 155 |
| BstDEI | CTNAG | 2 cut(s) | 87, 272 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstKTI | GATC | 7 cut(s) | 102, 126, 409, 454, 483, 490, 586 |
| BstMAI | GTCTC | 2 cut(s) | 127, 385 |
| BstMBI | GATC | 7 cut(s) | 99, 123, 406, 451, 480, 487, 583 |
| BstNSI | RCATGY | 1 cut(s) | 419 |
| BstX2I | RGATCY | 2 cut(s) | 451, 480 |
| BstYI | RGATCY | 2 cut(s) | 451, 480 |
| BsuI | GTATCC | 1 cut(s) | 612 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| BtsIMutI | CAGTG | 2 cut(s) | 38, 402 |
| Cfr13I | GGNCC | 3 cut(s) | 39, 83, 290 |
| Csp6I | GTAC | 4 cut(s) | 362, 397, 476, 503 |
| CviAII | CATG | 4 cut(s) | 365, 377, 385, 416 |
| CviJI | RGCY | 6 cut(s) | 5, 146, 165, 338, 428, 566 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 146, 165, 338, 428, 566 |
| CviQI | GTAC | 4 cut(s) | 362, 397, 476, 503 |
| DdeI | CTNAG | 2 cut(s) | 87, 272 |
| DpnI | GATC | 7 cut(s) | 101, 125, 408, 453, 482, 489, 585 |
| DpnII | GATC | 7 cut(s) | 99, 123, 406, 451, 480, 487, 583 |
| Eam1104I | CTCTTC | 1 cut(s) | 155 |
| EarI | CTCTTC | 1 cut(s) | 155 |
| Eco130I | CCWWGG | 2 cut(s) | 233, 278 |
| Eco47I | GGWCC | 3 cut(s) | 39, 83, 290 |
| Eco57I | CTGAAG | 1 cut(s) | 242 |
| EcoO109I | RGGNCCY | 1 cut(s) | 39 |
| EcoT14I | CCWWGG | 2 cut(s) | 233, 278 |
| ErhI | CCWWGG | 2 cut(s) | 233, 278 |
| FaeI | CATG | 4 cut(s) | 368, 380, 388, 419 |
| FaqI | GGGAC | 1 cut(s) | 276 |
| FatI | CATG | 4 cut(s) | 364, 376, 384, 415 |
| FauNDI | CATATG | 1 cut(s) | 460 |
| FbaI | TGATCA | 1 cut(s) | 123 |
| FokI | GGATG | 1 cut(s) | 68 |
| HapII | CCGG | 1 cut(s) | 553 |
| Hin1II | CATG | 4 cut(s) | 368, 380, 388, 419 |
| HinfI | GANTC | 2 cut(s) | 135, 547 |
| HpaII | CCGG | 1 cut(s) | 553 |
| HphI | GGTGA | 3 cut(s) | 133, 218, 542 |
| Hpy166II | GTNNAC | 1 cut(s) | 260 |
| Hpy188I | TCNGA | 3 cut(s) | 128, 222, 509 |
| Hpy188III | TCNNGA | 4 cut(s) | 86, 139, 191, 494 |
| Hpy8I | GTNNAC | 1 cut(s) | 260 |
| Hpy99I | CGWCG | 1 cut(s) | 495 |
| HpyAV | CCTTC | 2 cut(s) | 232, 420 |
| HpyCH4III | ACNGT | 2 cut(s) | 33, 600 |
| HpyF3I | CTNAG | 2 cut(s) | 87, 272 |
| Hsp92II | CATG | 4 cut(s) | 368, 380, 388, 419 |
| Ksp22I | TGATCA | 1 cut(s) | 123 |
| Kzo9I | GATC | 7 cut(s) | 99, 123, 406, 451, 480, 487, 583 |
| LguI | GCTCTTC | 1 cut(s) | 155 |
| LmnI | GCTCC | 1 cut(s) | 10 |
| LpnPI | CCDG | 5 cut(s) | 99, 166, 486, 566, 591 |
| LweI | GCATC | 1 cut(s) | 196 |
| MaeIII | GTNAC | 1 cut(s) | 420 |
| MalI | GATC | 7 cut(s) | 101, 125, 408, 453, 482, 489, 585 |
| MboI | GATC | 7 cut(s) | 99, 123, 406, 451, 480, 487, 583 |
| MboII | GAAGA | 5 cut(s) | 172, 461, 476, 479, 572 |
| MflI | RGATCY | 2 cut(s) | 451, 480 |
| MluCI | AATT | 2 cut(s) | 194, 312 |
| MlyI | GAGTC | 1 cut(s) | 129 |
| MnlI | CCTC | 5 cut(s) | 257, 354, 537, 574, 585 |
| MseI | TTAA | 3 cut(s) | 117, 531, 619 |
| MspI | CCGG | 1 cut(s) | 553 |
| NdeI | CATATG | 1 cut(s) | 460 |
| NdeII | GATC | 7 cut(s) | 99, 123, 406, 451, 480, 487, 583 |
| NlaIII | CATG | 4 cut(s) | 368, 380, 388, 419 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 41, 292, 576 |
| NspI | RCATGY | 1 cut(s) | 419 |
| PciI | ACATGT | 1 cut(s) | 415 |
| PciSI | GCTCTTC | 1 cut(s) | 155 |
| PfeI | GAWTC | 1 cut(s) | 547 |
| PleI | GAGTC | 1 cut(s) | 129 |
| PpsI | GAGTC | 1 cut(s) | 129 |
| PpuMI | RGGWCCY | 1 cut(s) | 39 |
| PscI | ACATGT | 1 cut(s) | 415 |
| Psp5II | RGGWCCY | 1 cut(s) | 39 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 41, 292, 576 |
| PspPI | GGNCC | 3 cut(s) | 39, 83, 290 |
| PspPPI | RGGWCCY | 1 cut(s) | 39 |
| PsuI | RGATCY | 2 cut(s) | 451, 480 |
| RsaI | GTAC | 4 cut(s) | 363, 398, 477, 504 |
| RsaNI | GTAC | 4 cut(s) | 362, 397, 476, 503 |
| SapI | GCTCTTC | 1 cut(s) | 155 |
| SaqAI | TTAA | 3 cut(s) | 117, 531, 619 |
| Sau3AI | GATC | 7 cut(s) | 99, 123, 406, 451, 480, 487, 583 |
| Sau96I | GGNCC | 3 cut(s) | 39, 83, 290 |
| ScaI | AGTACT | 1 cut(s) | 504 |
| SchI | GAGTC | 1 cut(s) | 129 |
| SfaNI | GCATC | 1 cut(s) | 196 |
| SinI | GGWCC | 3 cut(s) | 39, 83, 290 |
| SmlI | CTYRAG | 2 cut(s) | 137, 357 |
| SmoI | CTYRAG | 2 cut(s) | 137, 357 |
| Sse9I | AATT | 2 cut(s) | 194, 312 |
| StyI | CCWWGG | 2 cut(s) | 233, 278 |
| TaaI | ACNGT | 2 cut(s) | 33, 600 |
| TasI | AATT | 2 cut(s) | 194, 312 |
| TatI | WGTACW | 4 cut(s) | 361, 396, 475, 502 |
| TfiI | GAWTC | 1 cut(s) | 547 |
| Tru1I | TTAA | 3 cut(s) | 117, 531, 619 |
| Tru9I | TTAA | 3 cut(s) | 117, 531, 619 |
| TscAI | CASTG | 2 cut(s) | 38, 409 |
| TspDTI | ATGAA | 2 cut(s) | 72, 477 |
| TspRI | CASTG | 2 cut(s) | 38, 409 |
| VpaK11BI | GGWCC | 3 cut(s) | 39, 83, 290 |
| XapI | RAATTY | 1 cut(s) | 194 |
| XceI | RCATGY | 1 cut(s) | 419 |
| ZrmI | AGTACT | 1 cut(s) | 504 |