DNA RNA polymerases superfamily protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 215 |
| AccB1I | GGYRCC | 1 cut(s) | 215 |
| AciI | CCGC | 1 cut(s) | 219 |
| AclWI | GGATC | 1 cut(s) | 80 |
| AcuI | CTGAAG | 1 cut(s) | 248 |
| AfaI | GTAC | 2 cut(s) | 103, 217 |
| AgsI | TTSAA | 2 cut(s) | 89, 274 |
| AjnI | CCWGG | 4 cut(s) | 23, 153, 163, 211 |
| AluBI | AGCT | 1 cut(s) | 257 |
| AluI | AGCT | 1 cut(s) | 257 |
| Alw21I | GWGCWC | 1 cut(s) | 238 |
| AlwI | GGATC | 1 cut(s) | 80 |
| Asp718I | GGTACC | 1 cut(s) | 215 |
| AspS9I | GGNCC | 1 cut(s) | 27 |
| AvaII | GGWCC | 1 cut(s) | 27 |
| BanI | GGYRCC | 1 cut(s) | 215 |
| Bbv12I | GWGCWC | 1 cut(s) | 238 |
| BccI | CCATC | 1 cut(s) | 241 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 210, 244 |
| BciT130I | CCWGG | 4 cut(s) | 25, 155, 165, 213 |
| BfmI | CTRYAG | 1 cut(s) | 105 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 65 |
| BmcAI | AGTACT | 1 cut(s) | 103 |
| Bme1390I | CCNGG | 4 cut(s) | 25, 155, 165, 213 |
| Bme18I | GGWCC | 1 cut(s) | 27 |
| BmgT120I | GGNCC | 1 cut(s) | 27 |
| BmiI | GGNNCC | 2 cut(s) | 217, 252 |
| BmrFI | CCNGG | 4 cut(s) | 25, 155, 165, 213 |
| BpmI | CTGGAG | 1 cut(s) | 237 |
| BsaWI | WCCGGW | 1 cut(s) | 124 |
| Bse1I | ACTGG | 1 cut(s) | 30 |
| BseBI | CCWGG | 4 cut(s) | 25, 155, 165, 213 |
| BseGI | GGATG | 1 cut(s) | 252 |
| BseNI | ACTGG | 1 cut(s) | 30 |
| BshNI | GGYRCC | 1 cut(s) | 215 |
| BsiHKAI | GWGCWC | 1 cut(s) | 238 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 1 cut(s) | 238 |
| Bsp143I | GATC | 1 cut(s) | 72 |
| BspACI | CCGC | 1 cut(s) | 219 |
| BspLI | GGNNCC | 2 cut(s) | 217, 252 |
| BspPI | GGATC | 1 cut(s) | 80 |
| BspT107I | GGYRCC | 1 cut(s) | 215 |
| BsrI | ACTGG | 1 cut(s) | 30 |
| BssMI | GATC | 1 cut(s) | 72 |
| Bst2UI | CCWGG | 4 cut(s) | 25, 155, 165, 213 |
| BstF5I | GGATG | 1 cut(s) | 252 |
| BstKTI | GATC | 1 cut(s) | 75 |
| BstMBI | GATC | 1 cut(s) | 72 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 65 |
| BstNI | CCWGG | 4 cut(s) | 25, 155, 165, 213 |
| BstSCI | CCNGG | 4 cut(s) | 23, 153, 163, 211 |
| BstSFI | CTRYAG | 1 cut(s) | 105 |
| BtsCI | GGATG | 1 cut(s) | 252 |
| BtsIMutI | CAGTG | 2 cut(s) | 37, 99 |
| Cfr13I | GGNCC | 1 cut(s) | 27 |
| CsiI | ACCWGGT | 1 cut(s) | 211 |
| Csp6I | GTAC | 2 cut(s) | 102, 216 |
| CviAII | CATG | 2 cut(s) | 61, 76 |
| CviJI | RGCY | 2 cut(s) | 251, 257 |
| CviKI_1 | RGCY | 2 cut(s) | 251, 257 |
| CviQI | GTAC | 2 cut(s) | 102, 216 |
| DpnI | GATC | 1 cut(s) | 74 |
| DpnII | GATC | 1 cut(s) | 72 |
| Eco47I | GGWCC | 1 cut(s) | 27 |
| Eco57I | CTGAAG | 1 cut(s) | 248 |
| EcoRII | CCWGG | 4 cut(s) | 23, 153, 163, 211 |
| FaeI | CATG | 2 cut(s) | 64, 79 |
| FaiI | YATR | 5 cut(s) | 19, 62, 77, 141, 243 |
| FatI | CATG | 2 cut(s) | 60, 75 |
| FokI | GGATG | 1 cut(s) | 259 |
| GsuI | CTGGAG | 1 cut(s) | 237 |
| HapII | CCGG | 1 cut(s) | 125 |
| Hin1II | CATG | 2 cut(s) | 64, 79 |
| HinfI | GANTC | 2 cut(s) | 89, 121 |
| HpaII | CCGG | 1 cut(s) | 125 |
| Hpy188I | TCNGA | 2 cut(s) | 136, 177 |
| Hpy188III | TCNNGA | 2 cut(s) | 231, 266 |
| HpyAV | CCTTC | 1 cut(s) | 268 |
| HpyCH4V | TGCA | 1 cut(s) | 116 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 65 |
| Hsp92II | CATG | 2 cut(s) | 64, 79 |
| KpnI | GGTACC | 1 cut(s) | 219 |
| Kzo9I | GATC | 1 cut(s) | 72 |
| LmnI | GCTCC | 1 cut(s) | 256 |
| MabI | ACCWGGT | 1 cut(s) | 211 |
| MalI | GATC | 1 cut(s) | 74 |
| MboI | GATC | 1 cut(s) | 72 |
| MhlI | GDGCHC | 1 cut(s) | 238 |
| MluCI | AATT | 1 cut(s) | 111 |
| MnlI | CCTC | 2 cut(s) | 57, 183 |
| MslI | CAYNNNNRTG | 1 cut(s) | 203 |
| MspI | CCGG | 1 cut(s) | 125 |
| MspR9I | CCNGG | 4 cut(s) | 25, 155, 165, 213 |
| MvaI | CCWGG | 4 cut(s) | 25, 155, 165, 213 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 65 |
| NdeII | GATC | 1 cut(s) | 72 |
| NlaIII | CATG | 2 cut(s) | 64, 79 |
| NlaIV | GGNNCC | 2 cut(s) | 217, 252 |
| PfeI | GAWTC | 2 cut(s) | 89, 121 |
| PfoI | TCCNGGA | 1 cut(s) | 23 |
| Psp6I | CCWGG | 4 cut(s) | 23, 153, 163, 211 |
| PspGI | CCWGG | 4 cut(s) | 23, 153, 163, 211 |
| PspN4I | GGNNCC | 2 cut(s) | 217, 252 |
| PspPI | GGNCC | 1 cut(s) | 27 |
| RsaI | GTAC | 2 cut(s) | 103, 217 |
| RsaNI | GTAC | 2 cut(s) | 102, 216 |
| RseI | CAYNNNNRTG | 1 cut(s) | 203 |
| Sau3AI | GATC | 1 cut(s) | 72 |
| Sau96I | GGNCC | 1 cut(s) | 27 |
| ScaI | AGTACT | 1 cut(s) | 103 |
| ScrFI | CCNGG | 4 cut(s) | 25, 155, 165, 213 |
| SduI | GDGCHC | 1 cut(s) | 238 |
| SetI | ASST | 6 cut(s) | 175, 217, 226, 241, 259, 279 |
| SexAI | ACCWGGT | 1 cut(s) | 211 |
| SfcI | CTRYAG | 1 cut(s) | 105 |
| SinI | GGWCC | 1 cut(s) | 27 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 203 |
| Sse9I | AATT | 1 cut(s) | 111 |
| SsiI | CCGC | 1 cut(s) | 219 |
| StyD4I | CCNGG | 4 cut(s) | 23, 153, 163, 211 |
| TaqI | TCGA | 1 cut(s) | 230 |
| TasI | AATT | 1 cut(s) | 111 |
| TatI | WGTACW | 1 cut(s) | 101 |
| TfiI | GAWTC | 2 cut(s) | 89, 121 |
| TscAI | CASTG | 2 cut(s) | 37, 99 |
| TspDTI | ATGAA | 1 cut(s) | 6 |
| TspRI | CASTG | 2 cut(s) | 37, 99 |
| VpaK11BI | GGWCC | 1 cut(s) | 27 |
| ZrmI | AGTACT | 1 cut(s) | 103 |