pycom12g20720

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0000094
Physical Location & Seq
Forward (+)
22115144 .. 22116190
1047 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g20720.3

Sequence Viewer

Length: 954 bp
ATGAATCTGGGAGACGATCCTTCAGTCACTTCAGATCCCCCATTACGTGCCACAGGTGTGGAGGCACAGGACATATTGCCAGATATTGCCCATCTGAGCGACCCGCCGAGAGTTATGCTTCTGCGCCGAGTTACAGTGGAGGGAGTAACCCGAGCTCCAGTTATGGCGGAAACTATAATCGAAGTGACAGTGGGAGTGGAAGCCAAAATACTCAATTTTCCACTCAGAGGCAGCCACAGCAGTTTGGTGCAGCATCAGGTAGCCGCCCTCAAGGAAATCGAGCAGGTCGTAACAACCAAGGTTTTAGGGCTCGAGGTGGCCGTGACGGTGGAGCAGGACCCCAGTTTCATGGACGTATCAACTACTGGTACGTTACTTATTTGTGGTAATTGGGCGAGAGTCCTAATTGATCCAGGTGCTACTTTTTCATTTGTGTCTTCCTCATTTGCACCGAATCTAAATTCGCAACCTACATCGCTTGGGTATGATATGCTTGTACAAATGCCGCATGGAGATTTGTTTTGTGCACAGTGGGAGTTTAAAGGTTGGCCGGTAGTGGTGGAAGGGGAAATAATGGAAGCTAACCTGGTTCCTTTCAATTTGGTGGAGTTCGATGTTATCTTGGGAATGGATTGGCTCTCCAGGCATCGTGTTTATGTCGCGTGTTGGGAGAAATCTGTGACGTTCAATCGGCCTGGACGACCGTCGATCACATTTCAGGGTGAGCGACGAATCCTTCCTAATAGTATTATTTCTGCTATTCGCGCTTCTAAGTTGTTGTCTAAGGGATGTGTAGGGTTTCTAGCCCACGTAGTGACGAGGGATAAACCTTTGTTGAGTCCTAAAGATGTACCAGTGGTGAAGAAATTCACCGATATTTTTCCGGAAGATCTACCAGGGTTACCACCTGCGAGGGAAATTGAATTCACCATCGATTTACTTCCAGGGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2 RVT_1 Retrotrans_gag rve zf-CCHC

Protein Analysis

318

Amino Acids

34.79

Weight (kDa)

5.12

Isoelectric Point (pI)

43.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42190
fragaria_vesca FvH4_1g22371 FvH4_1g23261 FvH4_1g27933 FvH4_1g27934 FvH4_1g29231 FvH4_2g02781 FvH4_2g08031 FvH4_2g08581 FvH4_3g06961 FvH4_3g06962 FvH4_3g13531 FvH4_3g14391 FvH4_3g14392 FvH4_3g18622 FvH4_3g18964 FvH4_3g26314 FvH4_3g28781 FvH4_3g30771 FvH4_3g30772 FvH4_3g31752 FvH4_3g32803 FvH4_3g35751 FvH4_3g35752 FvH4_4g02151 FvH4_4g02642 FvH4_4g05523 FvH4_4g05524 FvH4_4g06574 FvH4_4g06722 FvH4_4g08644 FvH4_4g08645 FvH4_4g08646 FvH4_4g08851 FvH4_4g08971 FvH4_4g09081 FvH4_4g09243 FvH4_4g09244 FvH4_4g09283 FvH4_4g10021 FvH4_4g10032 FvH4_4g10033 FvH4_4g10182 FvH4_4g10361 FvH4_4g12502 FvH4_4g12503 FvH4_4g13341 FvH4_4g13942 FvH4_4g13943 FvH4_4g13944 FvH4_4g14432 FvH4_4g14822 FvH4_4g14823 FvH4_4g15291 FvH4_4g15292 FvH4_4g15293 FvH4_4g15471 FvH4_4g15583 FvH4_4g15584 FvH4_4g15585 FvH4_4g15586 FvH4_4g15587 FvH4_4g15591 FvH4_4g15592 FvH4_4g15593 FvH4_4g16179 FvH4_4g18131 FvH4_4g21031 FvH4_4g22021 FvH4_4g22021 FvH4_4g22042 FvH4_5g03402 FvH4_5g07411 FvH4_5g13881 FvH4_5g15792 FvH4_5g24682 FvH4_5g24911 FvH4_5g25322 FvH4_5g25641 FvH4_5g36692 FvH4_5g38072 FvH4_5g38171 FvH4_6g05202 FvH4_6g08531 FvH4_6g16342 FvH4_6g21771 FvH4_6g23303 FvH4_6g23961 FvH4_6g25381 FvH4_6g27021 FvH4_6g27022 FvH4_6g30091 FvH4_6g30092 FvH4_7g02051 FvH4_7g06031 FvH4_7g07031 FvH4_7g07581 FvH4_7g08381 FvH4_7g11551 FvH4_7g19711 FvH4_7g25621 FvH4_7g29722
malus_domestica MD06G1134500.v1.1 MD09G1067600.v1.1 MD13G1145500.v1.1 MD15G1166500.v1.1 MD16G1270000.v1.1
prunus_persica Prupe.7G030900_v2.0.a1
pyrus_communis pycom01g00710 pycom01g03760 pycom03g10770 pycom04g02180 pycom05g08050 pycom06g04140 pycom06g11110 pycom07g07550 pycom07g21570 pycom08g17240 pycom09g13900 pycom09g19570 pycom10g22300 pycom11g03210 pycom11g13750 pycom11g24890 pycom12561g00270 pycom12668g00020 pycom12g11280 pycom12g20720 pycom12g20730 pycom13g21410 pycom13g21660 pycom14g06010 pycom14g06370 pycom14g12800 pycom16g21440 pycom16g22530 pycom17g02030 pycom420g00170 pycom50g00020 pycom5153684g00110 pycom520g00860 pycom581g00060
rosa_chinensis RchiOBHm_Chr0c08g0498091 RchiOBHm_Chr0c08g0498101 RchiOBHm_Chr1g0326991 RchiOBHm_Chr2g0084311 RchiOBHm_Chr2g0090701 RchiOBHm_Chr2g0098591 RchiOBHm_Chr2g0109491 RchiOBHm_Chr2g0109501 RchiOBHm_Chr2g0130801 RchiOBHm_Chr2g0145931 RchiOBHm_Chr2g0168091 RchiOBHm_Chr3g0457081 RchiOBHm_Chr3g0457091 RchiOBHm_Chr3g0467781 RchiOBHm_Chr3g0467791 RchiOBHm_Chr3g0493771 RchiOBHm_Chr3g0494051 RchiOBHm_Chr3g0496881 RchiOBHm_Chr4g0401391 RchiOBHm_Chr4g0414861 RchiOBHm_Chr4g0424081 RchiOBHm_Chr5g0009611 RchiOBHm_Chr5g0049881 RchiOBHm_Chr5g0050351 RchiOBHm_Chr5g0053791 RchiOBHm_Chr5g0078031 RchiOBHm_Chr6g0256481 RchiOBHm_Chr6g0271231 RchiOBHm_Chr6g0286381 RchiOBHm_Chr7g0197101 RchiOBHm_Chr7g0221891 RchiOBHm_Chr7g0237801 RchiOBHm_Chr7g0237821
rosa_multiflora Rmu_sc0000509.1_g000034 Rmu_sc0004751.1_g000014 Rmu_sc0008546.1_g000002 Rmu_sc0009320.1_g000003 Rmu_sc0010661.1_g000006 Rmu_sc0029652.1_g000002
rosa_roxburghii Rroxscaffold_10G00433150 Rroxscaffold_15G00447630 Rroxscaffold_26G00447790 Rroxscaffold_29G00441810 Rroxscaffold_32G00442860 Rroxscaffold_33G00439800 Rroxscaffold_34G00443230 Rroxscaffold_3G00220560 Rroxscaffold_3G00227370 Rroxscaffold_3G00239080 Rroxscaffold_3G00239090 Rroxscaffold_3G00273190 Rroxscaffold_4G00323530 Rroxscaffold_4G00326840 Rroxscaffold_57G00443110 Rroxscaffold_5G00338590 Rroxscaffold_5G00347530 Rroxscaffold_68G00446990 Rroxscaffold_76G00448570 Rroxscaffold_90G00448860
rosa_rugosa Rorug06G0233600
rosa_samantha Rh3CG302700 Rh6DG286700
rosa_wichuraiana Rw0G002280 Rw0G004080 Rw0G011830 Rw1G003690 Rw1G008800 Rw1G009130 Rw1G009140 Rw1G009150 Rw1G009160 Rw1G009410 Rw1G009580 Rw1G012770 Rw1G015850 Rw1G026860 Rw2G003780 Rw2G006480 Rw2G016520 Rw2G016960 Rw2G018170 Rw2G025180 Rw2G025510 Rw2G025610 Rw2G025750 Rw2G025920 Rw2G029950 Rw2G046360 Rw2G046370 Rw2G046380 Rw3G009070 Rw3G025820 Rw3G027340 Rw3G027900 Rw3G028150 Rw3G029060 Rw4G002440 Rw4G005960 Rw4G007520 Rw4G011970 Rw4G011980 Rw4G012190 Rw4G012530 Rw4G018490 Rw4G026380 Rw5G003970 Rw5G030920 Rw5G031780 Rw5G031900 Rw5G033030 Rw5G033040 Rw5G036330 Rw5G039730 Rw5G048110 Rw6G006670 Rw6G007910 Rw6G009720 Rw6G010990 Rw6G012930 Rw6G012940 Rw6G013420 Rw6G014690 Rw6G015290 Rw6G015790 Rw6G015920 Rw6G036510 Rw7G016650 Rw7G023140 Rw7G028650 Rw7G036450 Rw7G036460 Rw7G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 916
Acc36I ACCTGC 2 cut(s) 274, 916
AccII CGCG 2 cut(s) 662, 765
AccIII TCCGGA 1 cut(s) 883
AciI CCGC 4 cut(s) 104, 167, 264, 506
AclWI GGATC 3 cut(s) 11, 29, 404
AcoI YGGCCR 2 cut(s) 318, 548
AcsI RAATTY 3 cut(s) 460, 866, 923
AcuI CTGAAG 2 cut(s) 6, 15
AdeI CACNNNGTG 1 cut(s) 814
AfaI GTAC 3 cut(s) 370, 498, 852
AfiI CCNNNNNNNGG 1 cut(s) 227
AgsI TTSAA 3 cut(s) 598, 688, 923
AjnI CCWGG 6 cut(s) 412, 585, 641, 694, 895, 943
AleI CACNNNNGTG 1 cut(s) 56
AluBI AGCT 2 cut(s) 155, 581
AluI AGCT 2 cut(s) 155, 581
Alw21I GWGCWC 2 cut(s) 157, 529
Alw26I GTCTC 1 cut(s) 6
Alw44I GTGCAC 1 cut(s) 525
AlwI GGATC 3 cut(s) 11, 29, 404
Ama87I CYCGRG 2 cut(s) 150, 311
Aor13HI TCCGGA 1 cut(s) 883
AoxI GGCC 3 cut(s) 318, 548, 692
ApaLI GTGCAC 1 cut(s) 525
ApeKI GCWGC 2 cut(s) 231, 250
ApoI RAATTY 3 cut(s) 460, 866, 923
Asp700I GAANNNNTTC 1 cut(s) 866
AspLEI GCGC 2 cut(s) 126, 767
AspS9I GGNCC 1 cut(s) 337
AsuHPI GGTGA 4 cut(s) 734, 862, 871, 919
AvaI CYCGRG 2 cut(s) 150, 311
AvaII GGWCC 1 cut(s) 337
BaeGI GKGCMC 1 cut(s) 529
BanII GRGCYC 2 cut(s) 157, 312
BarI GAAGNNNNNNTAC 2 cut(s) 192, 224
BbsI GAAGAC 1 cut(s) 429
Bbv12I GWGCWC 2 cut(s) 157, 529
BbvI GCAGC 2 cut(s) 243, 262
BccI CCATC 2 cut(s) 99, 938
BceAI ACGGC 1 cut(s) 305
BcgI CGANNNNNNTGC 2 cut(s) 97, 131
BciT130I CCWGG 6 cut(s) 414, 587, 643, 696, 897, 945
BcoDI GTCTC 1 cut(s) 6
BfaI CTAG 1 cut(s) 803
BfuAI ACCTGC 2 cut(s) 274, 916
BglII AGATCT 1 cut(s) 889
BisI GCNGC 4 cut(s) 232, 251, 264, 506
BlsI GCNGC 4 cut(s) 233, 252, 265, 507
Bme1390I CCNGG 6 cut(s) 414, 587, 643, 696, 897, 945
Bme18I GGWCC 1 cut(s) 337
BmeT110I CYCGRG 2 cut(s) 150, 311
BmgT120I GGNCC 1 cut(s) 337
BmiI GGNNCC 2 cut(s) 339, 591
BmrFI CCNGG 6 cut(s) 414, 587, 643, 696, 897, 945
BmrI ACTGGG 1 cut(s) 336
BmsI GCATC 2 cut(s) 262, 655
BmuI ACTGGG 1 cut(s) 336
BoxI GACNNNNGTC 1 cut(s) 703
BpiI GAAGAC 1 cut(s) 429
BpmI CTGGAG 2 cut(s) 141, 625
BpuEI CTTGAG 1 cut(s) 254
Bsa29I ATCGAT 1 cut(s) 933
BsaAI YACGTR 2 cut(s) 47, 811
BsaJI CCNNGG 3 cut(s) 297, 896, 944
BsaWI WCCGGW 1 cut(s) 883
BsaXI ACNNNNNCTCC 2 cut(s) 139, 169
Bsc4I CCNNNNNNNGG 1 cut(s) 227
Bse118I RCCGGY 1 cut(s) 550
Bse1I ACTGG 4 cut(s) 158, 342, 370, 854
BseAI TCCGGA 1 cut(s) 883
BseBI CCWGG 6 cut(s) 414, 587, 643, 696, 897, 945
BseCI ATCGAT 1 cut(s) 933
BseDI CCNNGG 3 cut(s) 297, 896, 944
BseGI GGATG 1 cut(s) 794
BseLI CCNNNNNNNGG 1 cut(s) 227
BseMII CTCAG 2 cut(s) 86, 238
BseNI ACTGG 4 cut(s) 158, 342, 370, 854
BseSI GKGCMC 1 cut(s) 529
BseXI GCAGC 2 cut(s) 243, 262
BsgI GTGCAG 1 cut(s) 269
Bsh1236I CGCG 2 cut(s) 662, 765
Bsh1285I CGRYCG 1 cut(s) 704
BshFI GGCC 3 cut(s) 320, 550, 694
BshVI ATCGAT 1 cut(s) 933
BsiEI CGRYCG 1 cut(s) 704
BsiHKAI GWGCWC 2 cut(s) 157, 529
BsiHKCI CYCGRG 2 cut(s) 150, 311
BsiSI CCGG 2 cut(s) 551, 884
BslI CCNNNNNNNGG 1 cut(s) 227
BsmAI GTCTC 1 cut(s) 6
BsmBI CGTCTC 1 cut(s) 6
BsnI GGCC 3 cut(s) 320, 550, 694
BsoBI CYCGRG 2 cut(s) 150, 311
Bsp1286I GDGCHC 3 cut(s) 157, 312, 529
Bsp13I TCCGGA 1 cut(s) 883
Bsp1407I TGTACA 1 cut(s) 496
Bsp143I GATC 5 cut(s) 16, 34, 409, 708, 889
BspACI CCGC 4 cut(s) 104, 167, 264, 506
BspANI GGCC 3 cut(s) 320, 550, 694
BspCNI CTCAG 2 cut(s) 87, 237
BspDI ATCGAT 1 cut(s) 933
BspEI TCCGGA 1 cut(s) 883
BspFNI CGCG 2 cut(s) 662, 765
BspLI GGNNCC 2 cut(s) 339, 591
BspMI ACCTGC 2 cut(s) 274, 916
BspPI GGATC 3 cut(s) 11, 29, 404
BsrFI RCCGGY 1 cut(s) 550
BsrGI TGTACA 1 cut(s) 496
BsrI ACTGG 4 cut(s) 158, 342, 370, 854
BssAI RCCGGY 1 cut(s) 550
BssECI CCNNGG 3 cut(s) 297, 896, 944
BssMI GATC 5 cut(s) 16, 34, 409, 708, 889
BssT1I CCWWGG 1 cut(s) 297
Bst2UI CCWGG 6 cut(s) 414, 587, 643, 696, 897, 945
Bst4CI ACNGT 5 cut(s) 136, 190, 328, 531, 705
BstAUI TGTACA 1 cut(s) 496
BstBAI YACGTR 2 cut(s) 47, 811
BstDEI CTNAG 4 cut(s) 95, 224, 771, 783
BstEII GGTNACC 1 cut(s) 900
BstF5I GGATG 1 cut(s) 794
BstFNI CGCG 2 cut(s) 662, 765
BstHHI GCGC 2 cut(s) 126, 767
BstKTI GATC 5 cut(s) 19, 37, 412, 711, 892
BstMAI GTCTC 1 cut(s) 6
BstMBI GATC 5 cut(s) 16, 34, 409, 708, 889
BstMCI CGRYCG 1 cut(s) 704
BstMWI GCNNNNNNNGC 3 cut(s) 237, 643, 764
BstNI CCWGG 6 cut(s) 414, 587, 643, 696, 897, 945
BstPAI GACNNNNGTC 1 cut(s) 703
BstPI GGTNACC 1 cut(s) 900
BstSCI CCNGG 6 cut(s) 412, 585, 641, 694, 895, 943
BstSLI GKGCMC 1 cut(s) 529
BstUI CGCG 2 cut(s) 662, 765
BstV1I GCAGC 2 cut(s) 243, 262
BstV2I GAAGAC 1 cut(s) 429
BstX2I RGATCY 2 cut(s) 34, 889
BstXI CCANNNNNNTGG 2 cut(s) 58, 349
BstYI RGATCY 2 cut(s) 34, 889
Bsu15I ATCGAT 1 cut(s) 933
BsuRI GGCC 3 cut(s) 320, 550, 694
BsuTUI ATCGAT 1 cut(s) 933
BtgZI GCGATG 1 cut(s) 459
BtsCI GGATG 1 cut(s) 794
BtsIMutI CAGTG 4 cut(s) 141, 195, 536, 861
BveI ACCTGC 2 cut(s) 274, 916
CfoI GCGC 2 cut(s) 126, 767
Cfr10I RCCGGY 1 cut(s) 550
Cfr13I GGNCC 1 cut(s) 337
ClaI ATCGAT 1 cut(s) 933
CsiI ACCWGGT 1 cut(s) 585
Csp6I GTAC 3 cut(s) 369, 497, 851
CviAII CATG 2 cut(s) 349, 509
CviQI GTAC 3 cut(s) 369, 497, 851
DdeI CTNAG 4 cut(s) 95, 224, 771, 783
DpnI GATC 5 cut(s) 18, 36, 411, 710, 891
DpnII GATC 5 cut(s) 16, 34, 409, 708, 889
DraI TTTAAA 1 cut(s) 541
DraIII CACNNNGTG 1 cut(s) 814
EaeI YGGCCR 2 cut(s) 318, 548
EciI GGCGGA 1 cut(s) 182
Ecl136II GAGCTC 1 cut(s) 155
Eco130I CCWWGG 1 cut(s) 297
Eco24I GRGCYC 2 cut(s) 157, 312
Eco47I GGWCC 1 cut(s) 337
Eco53kI GAGCTC 1 cut(s) 155
Eco57I CTGAAG 2 cut(s) 6, 15
Eco88I CYCGRG 2 cut(s) 150, 311
Eco91I GGTNACC 1 cut(s) 900
EcoICRI GAGCTC 1 cut(s) 155
EcoO109I RGGNCCY 1 cut(s) 337
EcoO65I GGTNACC 1 cut(s) 900
EcoRI GAATTC 1 cut(s) 923
EcoRII CCWGG 6 cut(s) 412, 585, 641, 694, 895, 943
EcoT14I CCWWGG 1 cut(s) 297
EcoT38I GRGCYC 2 cut(s) 157, 312
ErhI CCWWGG 1 cut(s) 297
Esp3I CGTCTC 1 cut(s) 6
FaeI CATG 2 cut(s) 352, 512
FaiI YATR 9 cut(s) 74, 116, 164, 176, 350, 486, 491, 510, 657
FatI CATG 2 cut(s) 348, 508
FauI CCCGC 1 cut(s) 111
Fnu4HI GCNGC 4 cut(s) 232, 251, 264, 506
FokI GGATG 1 cut(s) 801
FriOI GRGCYC 2 cut(s) 157, 312
Fsp4HI GCNGC 4 cut(s) 232, 251, 264, 506
FspBI CTAG 1 cut(s) 803
GlaI GCGC 2 cut(s) 125, 766
GluI GCNGC 4 cut(s) 232, 251, 264, 506
GsuI CTGGAG 2 cut(s) 141, 625
HaeIII GGCC 3 cut(s) 320, 550, 694
HapII CCGG 2 cut(s) 551, 884
HhaI GCGC 2 cut(s) 126, 767
Hin1II CATG 2 cut(s) 352, 512
Hin6I GCGC 2 cut(s) 124, 765
HinP1I GCGC 2 cut(s) 124, 765
HinfI GANTC 5 cut(s) 4, 399, 454, 732, 838
HpaII CCGG 2 cut(s) 551, 884
HphI GGTGA 4 cut(s) 734, 862, 871, 919
Hpy166II GTNNAC 1 cut(s) 527
Hpy188I TCNGA 3 cut(s) 34, 96, 227
Hpy188III TCNNGA 1 cut(s) 884
Hpy8I GTNNAC 1 cut(s) 527
Hpy99I CGWCG 2 cut(s) 709, 732
HpyAV CCTTC 3 cut(s) 30, 557, 746
HpyCH4III ACNGT 5 cut(s) 136, 190, 328, 531, 705
HpyCH4IV ACGT 5 cut(s) 46, 354, 371, 683, 810
HpyCH4V TGCA 3 cut(s) 250, 449, 527
HpyF10VI GCNNNNNNNGC 3 cut(s) 237, 643, 764
HpyF3I CTNAG 4 cut(s) 95, 224, 771, 783
HpySE526I ACGT 5 cut(s) 46, 354, 371, 683, 810
Hsp92II CATG 2 cut(s) 352, 512
HspAI GCGC 2 cut(s) 124, 765
Kpn2I TCCGGA 1 cut(s) 883
Kzo9I GATC 5 cut(s) 16, 34, 409, 708, 889
LmnI GCTCC 2 cut(s) 160, 331
Lsp1109I GCAGC 2 cut(s) 243, 262
LweI GCATC 2 cut(s) 262, 655
MabI ACCWGGT 1 cut(s) 585
MaeI CTAG 1 cut(s) 803
MaeII ACGT 5 cut(s) 46, 354, 371, 683, 810
MalI GATC 5 cut(s) 18, 36, 411, 710, 891
MboI GATC 5 cut(s) 16, 34, 409, 708, 889
MboII GAAGA 3 cut(s) 429, 874, 899
MflI RGATCY 2 cut(s) 34, 889
MhlI GDGCHC 3 cut(s) 157, 312, 529
MluCI AATT 9 cut(s) 214, 388, 405, 460, 598, 866, 918, 923, 949
MlyI GAGTC 2 cut(s) 408, 847
MnlI CCTC 8 cut(s) 55, 133, 221, 278, 307, 451, 813, 906
MroI TCCGGA 1 cut(s) 883
MroXI GAANNNNTTC 1 cut(s) 866
MseI TTAA 1 cut(s) 540
MslI CAYNNNNRTG 1 cut(s) 56
MspI CCGG 2 cut(s) 551, 884
MspR9I CCNGG 6 cut(s) 414, 587, 643, 696, 897, 945
MvaI CCWGG 6 cut(s) 414, 587, 643, 696, 897, 945
MvnI CGCG 2 cut(s) 662, 765
MwoI GCNNNNNNNGC 3 cut(s) 237, 643, 764
NdeII GATC 5 cut(s) 16, 34, 409, 708, 889
NlaIII CATG 2 cut(s) 352, 512
NlaIV GGNNCC 2 cut(s) 339, 591
NmeAIII GCCGAG 2 cut(s) 132, 152
NmuCI GTSAC 5 cut(s) 25, 184, 322, 679, 814
OliI CACNNNNGTG 1 cut(s) 56
PaeR7I CTCGAG 1 cut(s) 311
PaqCI CACCTGC 1 cut(s) 916
PcsI WCGNNNNNNNCGW 3 cut(s) 285, 318, 697
PdmI GAANNNNTTC 1 cut(s) 866
PfeI GAWTC 3 cut(s) 4, 454, 732
PkrI GCNGC 4 cut(s) 233, 252, 265, 507
PleI GAGTC 2 cut(s) 407, 846
PpsI GAGTC 2 cut(s) 407, 846
Ppu21I YACGTR 2 cut(s) 47, 811
PpuMI RGGWCCY 1 cut(s) 337
PshAI GACNNNNGTC 1 cut(s) 703
Psp124BI GAGCTC 1 cut(s) 157
Psp5II RGGWCCY 1 cut(s) 337
Psp6I CCWGG 6 cut(s) 412, 585, 641, 694, 895, 943
PspEI GGTNACC 1 cut(s) 900
PspGI CCWGG 6 cut(s) 412, 585, 641, 694, 895, 943
PspN4I GGNNCC 2 cut(s) 339, 591
PspPI GGNCC 1 cut(s) 337
PspPPI RGGWCCY 1 cut(s) 337
PspXI VCTCGAGB 1 cut(s) 311
PsuI RGATCY 2 cut(s) 34, 889
RsaI GTAC 3 cut(s) 370, 498, 852
RsaNI GTAC 3 cut(s) 369, 497, 851
RseI CAYNNNNRTG 1 cut(s) 56
SacI GAGCTC 1 cut(s) 157
SaqAI TTAA 1 cut(s) 540
SatI GCNGC 4 cut(s) 232, 251, 264, 506
Sau3AI GATC 5 cut(s) 16, 34, 409, 708, 889
Sau96I GGNCC 1 cut(s) 337
SchI GAGTC 2 cut(s) 408, 847
ScrFI CCNGG 6 cut(s) 414, 587, 643, 696, 897, 945
SduI GDGCHC 3 cut(s) 157, 312, 529
SexAI ACCWGGT 1 cut(s) 585
SfaNI GCATC 2 cut(s) 262, 655
Sfr274I CTCGAG 1 cut(s) 311
SinI GGWCC 1 cut(s) 337
SlaI CTCGAG 1 cut(s) 311
SmiMI CAYNNNNRTG 1 cut(s) 56
SmlI CTYRAG 2 cut(s) 269, 311
SmoI CTYRAG 2 cut(s) 269, 311
Sse9I AATT 9 cut(s) 214, 388, 405, 460, 598, 866, 918, 923, 949
SsiI CCGC 4 cut(s) 104, 167, 264, 506
SspMI CTAG 1 cut(s) 803
SstI GAGCTC 1 cut(s) 157
StyD4I CCNGG 6 cut(s) 412, 585, 641, 694, 895, 943
StyI CCWWGG 1 cut(s) 297
TaaI ACNGT 5 cut(s) 136, 190, 328, 531, 705
TaiI ACGT 5 cut(s) 49, 357, 374, 686, 813
TaqI TCGA 6 cut(s) 180, 279, 312, 612, 707, 933
TasI AATT 9 cut(s) 214, 388, 405, 460, 598, 866, 918, 923, 949
TatI WGTACW 1 cut(s) 496
TauI GCSGC 2 cut(s) 266, 508
TfiI GAWTC 3 cut(s) 4, 454, 732
Tru1I TTAA 1 cut(s) 540
Tru9I TTAA 1 cut(s) 540
TscAI CASTG 4 cut(s) 141, 195, 536, 861
TseFI GTSAC 5 cut(s) 25, 184, 322, 679, 814
TseI GCWGC 2 cut(s) 231, 250
Tsp45I GTSAC 5 cut(s) 25, 184, 322, 679, 814
TspDTI ATGAA 3 cut(s) 17, 337, 417
TspRI CASTG 4 cut(s) 141, 195, 536, 861
VneI GTGCAC 1 cut(s) 525
VpaK11BI GGWCC 1 cut(s) 337
XapI RAATTY 3 cut(s) 460, 866, 923
XhoI CTCGAG 1 cut(s) 311
XmnI GAANNNNTTC 1 cut(s) 866
XspI CTAG 1 cut(s) 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.