transposition, RNA-mediated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SH3_Tf2-1 | PF24626 | 69 - 134 | 2.3e-27 | Tf2-1-like, SH3 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 154 |
| AccII | CGCG | 1 cut(s) | 264 |
| AciI | CCGC | 2 cut(s) | 143, 264 |
| AclWI | GGATC | 1 cut(s) | 401 |
| AdeI | CACNNNGTG | 1 cut(s) | 309 |
| AfaI | GTAC | 3 cut(s) | 40, 96, 363 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 239, 445 |
| AgeI | ACCGGT | 1 cut(s) | 472 |
| AgsI | TTSAA | 3 cut(s) | 200, 223, 479 |
| AluBI | AGCT | 2 cut(s) | 226, 271 |
| AluI | AGCT | 2 cut(s) | 226, 271 |
| Alw26I | GTCTC | 1 cut(s) | 385 |
| AlwI | GGATC | 1 cut(s) | 401 |
| AsiGI | ACCGGT | 1 cut(s) | 472 |
| AspS9I | GGNCC | 2 cut(s) | 83, 290 |
| AsuHPI | GGTGA | 1 cut(s) | 218 |
| AvaII | GGWCC | 2 cut(s) | 83, 290 |
| BbsI | GAAGAC | 2 cut(s) | 364, 456 |
| BclI | TGATCA | 1 cut(s) | 123 |
| BcoDI | GTCTC | 1 cut(s) | 385 |
| BfaI | CTAG | 1 cut(s) | 279 |
| BisI | GCNGC | 1 cut(s) | 144 |
| BlpI | GCTNAGC | 1 cut(s) | 272 |
| BlsI | GCNGC | 1 cut(s) | 145 |
| Bme18I | GGWCC | 2 cut(s) | 83, 290 |
| BmgT120I | GGNCC | 2 cut(s) | 83, 290 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrI | ACTGGG | 1 cut(s) | 220 |
| BmuI | ACTGGG | 1 cut(s) | 220 |
| BpiI | GAAGAC | 2 cut(s) | 364, 456 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 272 |
| BsaJI | CCNNGG | 1 cut(s) | 233 |
| BsaWI | WCCGGW | 1 cut(s) | 472 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 239, 445 |
| Bse118I | RCCGGY | 1 cut(s) | 472 |
| Bse1I | ACTGG | 1 cut(s) | 215 |
| BseDI | CCNNGG | 1 cut(s) | 233 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 239, 445 |
| BseMII | CTCAG | 1 cut(s) | 161 |
| BseNI | ACTGG | 1 cut(s) | 215 |
| BseRI | GAGGAG | 1 cut(s) | 33 |
| Bsh1236I | CGCG | 1 cut(s) | 264 |
| BshTI | ACCGGT | 1 cut(s) | 472 |
| BsiSI | CCGG | 1 cut(s) | 473 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 239, 445 |
| BsmAI | GTCTC | 1 cut(s) | 385 |
| Bsp143I | GATC | 2 cut(s) | 123, 406 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 272 |
| Bsp19I | CCATGG | 1 cut(s) | 233 |
| BspACI | CCGC | 2 cut(s) | 143, 264 |
| BspCNI | CTCAG | 1 cut(s) | 160 |
| BspFNI | CGCG | 1 cut(s) | 264 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 1 cut(s) | 401 |
| BsrFI | RCCGGY | 1 cut(s) | 472 |
| BsrI | ACTGG | 1 cut(s) | 215 |
| BssAI | RCCGGY | 1 cut(s) | 472 |
| BssECI | CCNNGG | 1 cut(s) | 233 |
| BssMI | GATC | 2 cut(s) | 123, 406 |
| BssT1I | CCWWGG | 1 cut(s) | 233 |
| Bst4CI | ACNGT | 1 cut(s) | 294 |
| BstDEI | CTNAG | 2 cut(s) | 147, 272 |
| BstDSI | CCRYGG | 1 cut(s) | 233 |
| BstFNI | CGCG | 1 cut(s) | 264 |
| BstKTI | GATC | 2 cut(s) | 126, 409 |
| BstMAI | GTCTC | 1 cut(s) | 385 |
| BstMBI | GATC | 2 cut(s) | 123, 406 |
| BstUI | CGCG | 1 cut(s) | 264 |
| BstV2I | GAAGAC | 2 cut(s) | 364, 456 |
| BtgI | CCRYGG | 1 cut(s) | 233 |
| Cfr10I | RCCGGY | 1 cut(s) | 472 |
| Cfr13I | GGNCC | 2 cut(s) | 83, 290 |
| CpoI | CGGWCCG | 1 cut(s) | 290 |
| Csp6I | GTAC | 3 cut(s) | 39, 95, 362 |
| CspAI | ACCGGT | 1 cut(s) | 472 |
| CspI | CGGWCCG | 1 cut(s) | 290 |
| CviAII | CATG | 5 cut(s) | 234, 365, 377, 385, 416 |
| CviJI | RGCY | 6 cut(s) | 5, 17, 146, 226, 271, 276 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 17, 146, 226, 271, 276 |
| CviQI | GTAC | 3 cut(s) | 39, 95, 362 |
| DdeI | CTNAG | 2 cut(s) | 147, 272 |
| DpnI | GATC | 2 cut(s) | 125, 408 |
| DpnII | GATC | 2 cut(s) | 123, 406 |
| DraIII | CACNNNGTG | 1 cut(s) | 309 |
| Eco130I | CCWWGG | 1 cut(s) | 233 |
| Eco47I | GGWCC | 2 cut(s) | 83, 290 |
| EcoT14I | CCWWGG | 1 cut(s) | 233 |
| ErhI | CCWWGG | 1 cut(s) | 233 |
| FaeI | CATG | 5 cut(s) | 237, 368, 380, 388, 419 |
| FatI | CATG | 5 cut(s) | 233, 364, 376, 384, 415 |
| FauI | CCCGC | 1 cut(s) | 257 |
| FauNDI | CATATG | 1 cut(s) | 460 |
| FbaI | TGATCA | 1 cut(s) | 123 |
| FblI | GTMKAC | 1 cut(s) | 154 |
| Fnu4HI | GCNGC | 1 cut(s) | 144 |
| Fsp4HI | GCNGC | 1 cut(s) | 144 |
| FspBI | CTAG | 1 cut(s) | 279 |
| GluI | GCNGC | 1 cut(s) | 144 |
| HapII | CCGG | 1 cut(s) | 473 |
| Hin1II | CATG | 5 cut(s) | 237, 368, 380, 388, 419 |
| HindIII | AAGCTT | 1 cut(s) | 269 |
| HpaII | CCGG | 1 cut(s) | 473 |
| HphI | GGTGA | 1 cut(s) | 218 |
| Hpy166II | GTNNAC | 1 cut(s) | 155 |
| Hpy188I | TCNGA | 3 cut(s) | 150, 290, 440 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 220, 357 |
| Hpy8I | GTNNAC | 1 cut(s) | 155 |
| HpyAV | CCTTC | 1 cut(s) | 232 |
| HpyCH4III | ACNGT | 1 cut(s) | 294 |
| HpyCH4V | TGCA | 1 cut(s) | 170 |
| HpyF3I | CTNAG | 2 cut(s) | 147, 272 |
| Hsp92II | CATG | 5 cut(s) | 237, 368, 380, 388, 419 |
| Ksp22I | TGATCA | 1 cut(s) | 123 |
| Kzo9I | GATC | 2 cut(s) | 123, 406 |
| LmnI | GCTCC | 1 cut(s) | 10 |
| LpnPI | CCDG | 5 cut(s) | 99, 163, 196, 370, 486 |
| MaeI | CTAG | 1 cut(s) | 279 |
| MaeIII | GTNAC | 1 cut(s) | 206 |
| MalI | GATC | 2 cut(s) | 125, 408 |
| MboI | GATC | 2 cut(s) | 123, 406 |
| MboII | GAAGA | 3 cut(s) | 364, 461, 476 |
| MmeI | TCCRAC | 1 cut(s) | 32 |
| MnlI | CCTC | 7 cut(s) | 52, 54, 174, 354, 421, 438, 486 |
| MseI | TTAA | 2 cut(s) | 117, 138 |
| MspI | CCGG | 1 cut(s) | 473 |
| MvnI | CGCG | 1 cut(s) | 264 |
| NcoI | CCATGG | 1 cut(s) | 233 |
| NdeI | CATATG | 1 cut(s) | 460 |
| NdeII | GATC | 2 cut(s) | 123, 406 |
| NlaIII | CATG | 5 cut(s) | 237, 368, 380, 388, 419 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 1 cut(s) | 206 |
| PinAI | ACCGGT | 1 cut(s) | 472 |
| PkrI | GCNGC | 1 cut(s) | 145 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 2 cut(s) | 83, 290 |
| RsaI | GTAC | 3 cut(s) | 40, 96, 363 |
| RsaNI | GTAC | 3 cut(s) | 39, 95, 362 |
| Rsr2I | CGGWCCG | 1 cut(s) | 290 |
| RsrII | CGGWCCG | 1 cut(s) | 290 |
| SaqAI | TTAA | 2 cut(s) | 117, 138 |
| SatI | GCNGC | 1 cut(s) | 144 |
| Sau3AI | GATC | 2 cut(s) | 123, 406 |
| Sau96I | GGNCC | 2 cut(s) | 83, 290 |
| SetI | ASST | 7 cut(s) | 63, 117, 208, 228, 273, 346, 436 |
| SinI | GGWCC | 2 cut(s) | 83, 290 |
| SsiI | CCGC | 2 cut(s) | 143, 264 |
| SspMI | CTAG | 1 cut(s) | 279 |
| StyI | CCWWGG | 1 cut(s) | 233 |
| TaaI | ACNGT | 1 cut(s) | 294 |
| TatI | WGTACW | 1 cut(s) | 361 |
| TauI | GCSGC | 1 cut(s) | 146 |
| Tru1I | TTAA | 2 cut(s) | 117, 138 |
| Tru9I | TTAA | 2 cut(s) | 117, 138 |
| TseFI | GTSAC | 1 cut(s) | 206 |
| Tsp45I | GTSAC | 1 cut(s) | 206 |
| TspDTI | ATGAA | 2 cut(s) | 312, 477 |
| TspGWI | ACGGA | 1 cut(s) | 320 |
| VpaK11BI | GGWCC | 2 cut(s) | 83, 290 |
| XmiI | GTMKAC | 1 cut(s) | 154 |
| XspI | CTAG | 1 cut(s) | 279 |