Rw2G016960

transcription regulatory region sequence-specific DNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000094
Physical Location & Seq
Reverse (-)
20631152 .. 20633321
2170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G016960.1

Sequence Viewer

Length: 882 bp
ATGACATGGGATGTGTTCAAGACCCATTTCTATGGACGGTACTTTAGTGATGCCCATCTTAATCGGATGCAGGATCAGTTCTTGGGCTTGGTGAAGAGAGATGATCAGTCAGTGTTGGAGTTTGAGCAGGAGTTTCTCTCATTGGCCCACCATGTGCCGGATTTGGTTCGCTCTGAGCAAAACAAGATTCGTAGATTTGTTTTGGGACTTGGAGGAAAGTTTAAGGATAAGATGTTAGGCACACCGTATCGGAGTTTTGCTGAGGCAGTATCTTATGCCATGGACATTGAGTCGGACTCACCAGCTGGATTTCACCCTAGGGATCCTGGTGGCCCTAGCCAGGGTCCATCTAAGAGGGCTACTTCTACATCCGGTTCTGGTTCTTCAGTTGGTAGTGGGAAGAGCAGTGGTTCCAGTGCGAGATCCCGTAATAGATTCAGGGGACGTTTCGGCAGGAGATTCTCTCGGGGACAGTTTAGTGGACAGCAGTCTGGGCAGCTTGAGAGGTCGAAGAGTTATCATGGTGGTTCGAGTGGGGCTTCGTCTAGCCAGTCAGCTCAGTTTGGGCAGTACCAGACAGTGGGATGTTTTATGTGTGGTCAGCAGGACCACTTCAGGAGAGATTGCCCTCTTTTGGCTCAGGGAGCCAGATCTACCCCCACTCAGACTGTTGGTCAGTCCTCTGCTGGCGGATCGACTAGCGGTGCCCGCACCAGCTCCGCAGGCCGAGCTAGTTCTCAGCAAGGCAGGGCTCAGCGAGGTCGTCCCGTGACACATGCTAGACTGCACGCCATGACTCAGCAGGAGGGCCGTGATTCACCGAAGGTCATTTTTCTTGGGTTTAGCCGGTTATTATCGGCGGTTCGTGCAGGATTTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04010 ko04011 ko04013 ko04022 ko04371 ko04921 ko05202 ko05418 map04010 map04011 map04013 map04022 map04371 map04921 map05202 map05418
Pfam Domains
Protein Families
HJURP_C SRF-TF

Protein Analysis

293

Amino Acids

31.85

Weight (kDa)

10.73

Isoelectric Point (pI)

54.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotrans_gag PF03732 2 - 70 2.3e-10 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42190
fragaria_vesca FvH4_1g22371 FvH4_1g23261 FvH4_1g27933 FvH4_1g27934 FvH4_1g29231 FvH4_2g02781 FvH4_2g08031 FvH4_2g08581 FvH4_3g06961 FvH4_3g06962 FvH4_3g13531 FvH4_3g14391 FvH4_3g14392 FvH4_3g18622 FvH4_3g18964 FvH4_3g26314 FvH4_3g28781 FvH4_3g30771 FvH4_3g30772 FvH4_3g31752 FvH4_3g32803 FvH4_3g35751 FvH4_3g35752 FvH4_4g02151 FvH4_4g02642 FvH4_4g05523 FvH4_4g05524 FvH4_4g06574 FvH4_4g06722 FvH4_4g08644 FvH4_4g08645 FvH4_4g08646 FvH4_4g08851 FvH4_4g08971 FvH4_4g09081 FvH4_4g09243 FvH4_4g09244 FvH4_4g09283 FvH4_4g10021 FvH4_4g10032 FvH4_4g10033 FvH4_4g10182 FvH4_4g10361 FvH4_4g12502 FvH4_4g12503 FvH4_4g13341 FvH4_4g13942 FvH4_4g13943 FvH4_4g13944 FvH4_4g14432 FvH4_4g14822 FvH4_4g14823 FvH4_4g15291 FvH4_4g15292 FvH4_4g15293 FvH4_4g15471 FvH4_4g15583 FvH4_4g15584 FvH4_4g15585 FvH4_4g15586 FvH4_4g15587 FvH4_4g15591 FvH4_4g15592 FvH4_4g15593 FvH4_4g16179 FvH4_4g18131 FvH4_4g21031 FvH4_4g22021 FvH4_4g22021 FvH4_4g22042 FvH4_5g03402 FvH4_5g07411 FvH4_5g13881 FvH4_5g15792 FvH4_5g24682 FvH4_5g24911 FvH4_5g25322 FvH4_5g25641 FvH4_5g36692 FvH4_5g38072 FvH4_5g38171 FvH4_6g05202 FvH4_6g08531 FvH4_6g16342 FvH4_6g21771 FvH4_6g23303 FvH4_6g23961 FvH4_6g25381 FvH4_6g27021 FvH4_6g27022 FvH4_6g30091 FvH4_6g30092 FvH4_7g02051 FvH4_7g06031 FvH4_7g07031 FvH4_7g07581 FvH4_7g08381 FvH4_7g11551 FvH4_7g19711 FvH4_7g25621 FvH4_7g29722
malus_domestica MD06G1134500.v1.1 MD09G1067600.v1.1 MD13G1145500.v1.1 MD15G1166500.v1.1 MD16G1270000.v1.1
prunus_persica Prupe.7G030900_v2.0.a1
pyrus_communis pycom01g00710 pycom01g03760 pycom03g10770 pycom04g02180 pycom05g08050 pycom06g04140 pycom06g11110 pycom07g07550 pycom07g21570 pycom08g17240 pycom09g13900 pycom09g19570 pycom10g22300 pycom11g03210 pycom11g13750 pycom11g24890 pycom12561g00270 pycom12668g00020 pycom12g11280 pycom12g20720 pycom12g20730 pycom13g21410 pycom13g21660 pycom14g06010 pycom14g06370 pycom14g12800 pycom16g21440 pycom16g22530 pycom17g02030 pycom420g00170 pycom50g00020 pycom5153684g00110 pycom520g00860 pycom581g00060
rosa_chinensis RchiOBHm_Chr0c08g0498091 RchiOBHm_Chr0c08g0498101 RchiOBHm_Chr1g0326991 RchiOBHm_Chr2g0084311 RchiOBHm_Chr2g0090701 RchiOBHm_Chr2g0098591 RchiOBHm_Chr2g0109491 RchiOBHm_Chr2g0109501 RchiOBHm_Chr2g0130801 RchiOBHm_Chr2g0145931 RchiOBHm_Chr2g0168091 RchiOBHm_Chr3g0457081 RchiOBHm_Chr3g0457091 RchiOBHm_Chr3g0467781 RchiOBHm_Chr3g0467791 RchiOBHm_Chr3g0493771 RchiOBHm_Chr3g0494051 RchiOBHm_Chr3g0496881 RchiOBHm_Chr4g0401391 RchiOBHm_Chr4g0414861 RchiOBHm_Chr4g0424081 RchiOBHm_Chr5g0009611 RchiOBHm_Chr5g0049881 RchiOBHm_Chr5g0050351 RchiOBHm_Chr5g0053791 RchiOBHm_Chr5g0078031 RchiOBHm_Chr6g0256481 RchiOBHm_Chr6g0271231 RchiOBHm_Chr6g0286381 RchiOBHm_Chr7g0197101 RchiOBHm_Chr7g0221891 RchiOBHm_Chr7g0237801 RchiOBHm_Chr7g0237821
rosa_multiflora Rmu_sc0000509.1_g000034 Rmu_sc0004751.1_g000014 Rmu_sc0008546.1_g000002 Rmu_sc0009320.1_g000003 Rmu_sc0010661.1_g000006 Rmu_sc0029652.1_g000002
rosa_roxburghii Rroxscaffold_10G00433150 Rroxscaffold_15G00447630 Rroxscaffold_26G00447790 Rroxscaffold_29G00441810 Rroxscaffold_32G00442860 Rroxscaffold_33G00439800 Rroxscaffold_34G00443230 Rroxscaffold_3G00220560 Rroxscaffold_3G00227370 Rroxscaffold_3G00239080 Rroxscaffold_3G00239090 Rroxscaffold_3G00273190 Rroxscaffold_4G00323530 Rroxscaffold_4G00326840 Rroxscaffold_57G00443110 Rroxscaffold_5G00338590 Rroxscaffold_5G00347530 Rroxscaffold_68G00446990 Rroxscaffold_76G00448570 Rroxscaffold_90G00448860
rosa_rugosa Rorug06G0233600
rosa_samantha Rh3CG302700 Rh6DG286700
rosa_wichuraiana Rw0G002280 Rw0G004080 Rw0G011830 Rw1G003690 Rw1G008800 Rw1G009130 Rw1G009140 Rw1G009150 Rw1G009160 Rw1G009410 Rw1G009580 Rw1G012770 Rw1G015850 Rw1G026860 Rw2G003780 Rw2G006480 Rw2G016520 Rw2G016960 Rw2G018170 Rw2G025180 Rw2G025510 Rw2G025610 Rw2G025750 Rw2G025920 Rw2G029950 Rw2G046360 Rw2G046370 Rw2G046380 Rw3G009070 Rw3G025820 Rw3G027340 Rw3G027900 Rw3G028150 Rw3G029060 Rw4G002440 Rw4G005960 Rw4G007520 Rw4G011970 Rw4G011980 Rw4G012190 Rw4G012530 Rw4G018490 Rw4G026380 Rw5G003970 Rw5G030920 Rw5G031780 Rw5G031900 Rw5G033030 Rw5G033040 Rw5G036330 Rw5G039730 Rw5G048110 Rw6G006670 Rw6G007910 Rw6G009720 Rw6G010990 Rw6G012930 Rw6G012940 Rw6G013420 Rw6G014690 Rw6G015290 Rw6G015790 Rw6G015920 Rw6G036510 Rw7G016650 Rw7G023140 Rw7G028650 Rw7G036450 Rw7G036460 Rw7G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 704
AccB7I CCANNNNNTGG 1 cut(s) 580
AciI CCGC 5 cut(s) 690, 702, 709, 720, 860
AclWI GGATC 5 cut(s) 81, 317, 330, 417, 700
AcuI CTGAAG 2 cut(s) 369, 598
AdeI CACNNNGTG 1 cut(s) 154
AfaI GTAC 2 cut(s) 41, 572
AfiI CCNNNNNNNGG 5 cut(s) 157, 340, 341, 580, 634
AgsI TTSAA 1 cut(s) 19
AhdI GACNNNNNGTC 2 cut(s) 289, 672
AjnI CCWGG 2 cut(s) 325, 339
AluBI AGCT 5 cut(s) 305, 499, 557, 717, 731
AluI AGCT 5 cut(s) 305, 499, 557, 717, 731
AlwI GGATC 5 cut(s) 81, 317, 330, 417, 700
Ama87I CYCGRG 1 cut(s) 465
AoxI GGCC 4 cut(s) 144, 331, 724, 808
ApeKI GCWGC 1 cut(s) 496
AspA2I CCTAGG 1 cut(s) 317
AspS9I GGNCC 5 cut(s) 145, 332, 344, 607, 808
AsuHPI GGTGA 4 cut(s) 103, 291, 305, 810
AvaI CYCGRG 1 cut(s) 465
AvaII GGWCC 2 cut(s) 344, 607
AvrII CCTAGG 1 cut(s) 317
BaeGI GKGCMC 1 cut(s) 709
BaeI ACNNNNGTAYC 2 cut(s) 31, 64
BamHI GGATCC 1 cut(s) 322
BanI GGYRCC 1 cut(s) 704
BanII GRGCYC 1 cut(s) 754
BbvCI CCTCAGC 1 cut(s) 261
BbvI GCAGC 1 cut(s) 508
BccI CCATC 2 cut(s) 63, 355
BceAI ACGGC 1 cut(s) 795
BciT130I CCWGG 2 cut(s) 327, 341
BclI TGATCA 1 cut(s) 103
BfaI CTAG 6 cut(s) 318, 336, 546, 699, 732, 780
BglII AGATCT 1 cut(s) 650
BisI GCNGC 1 cut(s) 497
BlnI CCTAGG 1 cut(s) 317
BlpI GCTNAGC 1 cut(s) 753
BlsI GCNGC 1 cut(s) 498
Bme1390I CCNGG 2 cut(s) 327, 341
Bme18I GGWCC 2 cut(s) 344, 607
BmeRI GACNNNNNGTC 2 cut(s) 289, 672
BmeT110I CYCGRG 1 cut(s) 465
BmgT120I GGNCC 5 cut(s) 145, 332, 344, 607, 808
BmiI GGNNCC 5 cut(s) 324, 345, 412, 646, 706
BmrFI CCNGG 2 cut(s) 327, 341
BmsI GCATC 2 cut(s) 40, 57
BoxI GACNNNNGTC 1 cut(s) 487
BplI GAGNNNNNCTC 6 cut(s) 122, 154, 281, 313, 448, 480
Bpu10I CCTNAGC 2 cut(s) 261, 639
Bpu1102I GCTNAGC 1 cut(s) 753
BpuEI CTTGAG 1 cut(s) 521
BsaBI GATNNNNATC 1 cut(s) 54
BsaJI CCNNGG 3 cut(s) 279, 317, 340
BsaWI WCCGGW 1 cut(s) 371
Bsc4I CCNNNNNNNGG 5 cut(s) 157, 340, 341, 580, 634
Bse118I RCCGGY 1 cut(s) 846
Bse1I ACTGG 2 cut(s) 414, 550
Bse8I GATNNNNATC 1 cut(s) 54
BseBI CCWGG 2 cut(s) 327, 341
BseDI CCNNGG 3 cut(s) 279, 317, 340
BseGI GGATG 4 cut(s) 16, 72, 368, 590
BseJI GATNNNNATC 1 cut(s) 54
BseLI CCNNNNNNNGG 5 cut(s) 157, 340, 341, 580, 634
BseMII CTCAG 8 cut(s) 165, 252, 572, 653, 677, 752, 767, 812
BseNI ACTGG 2 cut(s) 414, 550
BseSI GKGCMC 1 cut(s) 709
BseXI GCAGC 1 cut(s) 508
BsgI GTGCAG 1 cut(s) 770
BshFI GGCC 4 cut(s) 146, 333, 726, 810
BshNI GGYRCC 1 cut(s) 704
BsiHKCI CYCGRG 1 cut(s) 465
BsiSI CCGG 3 cut(s) 158, 372, 847
BslFI GGGAC 4 cut(s) 219, 456, 483, 750
BslI CCNNNNNNNGG 5 cut(s) 157, 340, 341, 580, 634
BsmFI GGGAC 4 cut(s) 219, 456, 483, 750
BsnI GGCC 4 cut(s) 146, 333, 726, 810
BsoBI CYCGRG 1 cut(s) 465
Bsp1286I GDGCHC 2 cut(s) 709, 754
Bsp143I GATC 6 cut(s) 73, 103, 322, 422, 650, 692
Bsp1720I GCTNAGC 1 cut(s) 753
Bsp19I CCATGG 1 cut(s) 279
BspACI CCGC 5 cut(s) 690, 702, 709, 720, 860
BspANI GGCC 4 cut(s) 146, 333, 726, 810
BspCNI CTCAG 8 cut(s) 166, 253, 571, 652, 676, 751, 766, 811
BspLI GGNNCC 5 cut(s) 324, 345, 412, 646, 706
BspPI GGATC 5 cut(s) 81, 317, 330, 417, 700
BspQI GCTCTTC 1 cut(s) 395
BspT107I GGYRCC 1 cut(s) 704
BsrFI RCCGGY 1 cut(s) 846
BsrI ACTGG 2 cut(s) 414, 550
BssAI RCCGGY 1 cut(s) 846
BssECI CCNNGG 3 cut(s) 279, 317, 340
BssMI GATC 6 cut(s) 73, 103, 322, 422, 650, 692
BssT1I CCWWGG 2 cut(s) 279, 317
Bst2UI CCWGG 2 cut(s) 327, 341
Bst4CI ACNGT 5 cut(s) 39, 246, 474, 580, 670
Bst6I CTCTTC 3 cut(s) 89, 395, 506
BstC8I GCNNGC 4 cut(s) 688, 709, 724, 789
BstDEI CTNAG 9 cut(s) 174, 261, 351, 558, 639, 663, 738, 753, 798
BstDSI CCRYGG 1 cut(s) 279
BstF5I GGATG 4 cut(s) 16, 72, 368, 590
BstKTI GATC 6 cut(s) 76, 106, 325, 425, 653, 695
BstMBI GATC 6 cut(s) 73, 103, 322, 422, 650, 692
BstMWI GCNNNNNNNGC 6 cut(s) 493, 644, 708, 723, 728, 866
BstNI CCWGG 2 cut(s) 327, 341
BstNSI RCATGY 1 cut(s) 779
BstPAI GACNNNNGTC 1 cut(s) 487
BstSCI CCNGG 2 cut(s) 325, 339
BstSLI GKGCMC 1 cut(s) 709
BstV1I GCAGC 1 cut(s) 508
BstX2I RGATCY 3 cut(s) 322, 422, 650
BstXI CCANNNNNNTGG 1 cut(s) 32
BstYI RGATCY 3 cut(s) 322, 422, 650
BsuRI GGCC 4 cut(s) 146, 333, 726, 810
BtgI CCRYGG 1 cut(s) 279
BtsCI GGATG 4 cut(s) 16, 72, 368, 590
BtsI GCAGTG 1 cut(s) 412
BtsIMutI CAGTG 4 cut(s) 117, 412, 421, 585
Cac8I GCNNGC 4 cut(s) 688, 709, 724, 789
Cfr10I RCCGGY 1 cut(s) 846
Cfr13I GGNCC 5 cut(s) 145, 332, 344, 607, 808
Csp6I GTAC 2 cut(s) 40, 571
CviAII CATG 6 cut(s) 6, 152, 280, 521, 776, 793
CviQI GTAC 2 cut(s) 40, 571
DdeI CTNAG 9 cut(s) 174, 261, 351, 558, 639, 663, 738, 753, 798
DpnI GATC 6 cut(s) 75, 105, 324, 424, 652, 694
DpnII GATC 6 cut(s) 73, 103, 322, 422, 650, 692
DraIII CACNNNGTG 1 cut(s) 154
DriI GACNNNNNGTC 2 cut(s) 289, 672
Eam1104I CTCTTC 3 cut(s) 89, 395, 506
Eam1105I GACNNNNNGTC 2 cut(s) 289, 672
EarI CTCTTC 3 cut(s) 89, 395, 506
EciI GGCGGA 1 cut(s) 705
Eco130I CCWWGG 2 cut(s) 279, 317
Eco24I GRGCYC 1 cut(s) 754
Eco47I GGWCC 2 cut(s) 344, 607
Eco57I CTGAAG 2 cut(s) 369, 598
Eco88I CYCGRG 1 cut(s) 465
EcoRII CCWGG 2 cut(s) 325, 339
EcoT14I CCWWGG 2 cut(s) 279, 317
EcoT38I GRGCYC 1 cut(s) 754
ErhI CCWWGG 2 cut(s) 279, 317
FaeI CATG 6 cut(s) 9, 155, 283, 524, 779, 796
FaiI YATR 9 cut(s) 7, 33, 153, 276, 281, 522, 593, 777, 794
FaqI GGGAC 4 cut(s) 219, 456, 483, 750
FatI CATG 6 cut(s) 5, 151, 279, 520, 775, 792
FauI CCCGC 1 cut(s) 716
FbaI TGATCA 1 cut(s) 103
Fnu4HI GCNGC 1 cut(s) 497
FokI GGATG 4 cut(s) 23, 79, 355, 597
FriOI GRGCYC 1 cut(s) 754
Fsp4HI GCNGC 1 cut(s) 497
FspBI CTAG 6 cut(s) 318, 336, 546, 699, 732, 780
GluI GCNGC 1 cut(s) 497
HaeIII GGCC 4 cut(s) 146, 333, 726, 810
HapII CCGG 3 cut(s) 158, 372, 847
Hin1II CATG 6 cut(s) 9, 155, 283, 524, 779, 796
HinfI GANTC 7 cut(s) 187, 290, 296, 435, 459, 796, 815
HpaII CCGG 3 cut(s) 158, 372, 847
HphI GGTGA 4 cut(s) 103, 291, 305, 810
Hpy166II GTNNAC 1 cut(s) 482
Hpy188I TCNGA 5 cut(s) 66, 175, 252, 295, 666
Hpy188III TCNNGA 2 cut(s) 19, 616
Hpy8I GTNNAC 1 cut(s) 482
HpyAV CCTTC 1 cut(s) 817
HpyCH4III ACNGT 5 cut(s) 39, 246, 474, 580, 670
HpyCH4IV ACGT 1 cut(s) 445
HpyCH4V TGCA 3 cut(s) 70, 787, 869
HpyF10VI GCNNNNNNNGC 6 cut(s) 493, 644, 708, 723, 728, 866
HpyF3I CTNAG 9 cut(s) 174, 261, 351, 558, 639, 663, 738, 753, 798
HpySE526I ACGT 1 cut(s) 445
Hsp92II CATG 6 cut(s) 9, 155, 283, 524, 779, 796
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 6 cut(s) 73, 103, 322, 422, 650, 692
LguI GCTCTTC 1 cut(s) 395
LmnI GCTCC 2 cut(s) 644, 722
Lsp1109I GCAGC 1 cut(s) 508
LweI GCATC 2 cut(s) 40, 57
MaeI CTAG 6 cut(s) 318, 336, 546, 699, 732, 780
MaeII ACGT 1 cut(s) 445
MaeIII GTNAC 1 cut(s) 769
MalI GATC 6 cut(s) 75, 105, 324, 424, 652, 694
MboI GATC 6 cut(s) 73, 103, 322, 422, 650, 692
MboII GAAGA 4 cut(s) 106, 375, 412, 523
MflI RGATCY 3 cut(s) 322, 422, 650
MhlI GDGCHC 2 cut(s) 709, 754
MlyI GAGTC 3 cut(s) 290, 299, 790
MmeI TCCRAC 2 cut(s) 96, 273
MnlI CCTC 8 cut(s) 206, 256, 348, 498, 639, 691, 752, 799
MseI TTAA 2 cut(s) 60, 222
MslI CAYNNNNRTG 1 cut(s) 30
MspA1I CMGCKG 1 cut(s) 305
MspI CCGG 3 cut(s) 158, 372, 847
MspR9I CCNGG 2 cut(s) 327, 341
MvaI CCWGG 2 cut(s) 327, 341
MwoI GCNNNNNNNGC 6 cut(s) 493, 644, 708, 723, 728, 866
NcoI CCATGG 1 cut(s) 279
NdeII GATC 6 cut(s) 73, 103, 322, 422, 650, 692
NlaIII CATG 6 cut(s) 9, 155, 283, 524, 779, 796
NlaIV GGNNCC 5 cut(s) 324, 345, 412, 646, 706
NmeAIII GCCGAG 1 cut(s) 752
NmuCI GTSAC 1 cut(s) 769
NspI RCATGY 1 cut(s) 779
PciSI GCTCTTC 1 cut(s) 395
PfeI GAWTC 4 cut(s) 187, 435, 459, 815
PflMI CCANNNNNTGG 1 cut(s) 580
PkrI GCNGC 1 cut(s) 498
PleI GAGTC 3 cut(s) 290, 298, 790
PpsI GAGTC 3 cut(s) 290, 298, 790
PshAI GACNNNNGTC 1 cut(s) 487
Psp6I CCWGG 2 cut(s) 325, 339
PspGI CCWGG 2 cut(s) 325, 339
PspN4I GGNNCC 5 cut(s) 324, 345, 412, 646, 706
PspPI GGNCC 5 cut(s) 145, 332, 344, 607, 808
PsuI RGATCY 3 cut(s) 322, 422, 650
PvuII CAGCTG 1 cut(s) 305
RsaI GTAC 2 cut(s) 41, 572
RsaNI GTAC 2 cut(s) 40, 571
RseI CAYNNNNRTG 1 cut(s) 30
SapI GCTCTTC 1 cut(s) 395
SaqAI TTAA 2 cut(s) 60, 222
SatI GCNGC 1 cut(s) 497
Sau3AI GATC 6 cut(s) 73, 103, 322, 422, 650, 692
Sau96I GGNCC 5 cut(s) 145, 332, 344, 607, 808
SchI GAGTC 3 cut(s) 290, 299, 790
ScrFI CCNGG 2 cut(s) 327, 341
SduI GDGCHC 2 cut(s) 709, 754
SetI ASST 9 cut(s) 307, 448, 501, 509, 559, 719, 733, 763, 828
SfaNI GCATC 2 cut(s) 40, 57
SinI GGWCC 2 cut(s) 344, 607
SmiMI CAYNNNNRTG 1 cut(s) 30
SmlI CTYRAG 1 cut(s) 500
SmoI CTYRAG 1 cut(s) 500
SsiI CCGC 5 cut(s) 690, 702, 709, 720, 860
SspMI CTAG 6 cut(s) 318, 336, 546, 699, 732, 780
StyD4I CCNGG 2 cut(s) 325, 339
StyI CCWWGG 2 cut(s) 279, 317
TaaI ACNGT 5 cut(s) 39, 246, 474, 580, 670
TaiI ACGT 1 cut(s) 448
TaqI TCGA 3 cut(s) 509, 530, 695
TfiI GAWTC 4 cut(s) 187, 435, 459, 815
Tru1I TTAA 2 cut(s) 60, 222
Tru9I TTAA 2 cut(s) 60, 222
TscAI CASTG 4 cut(s) 117, 412, 421, 585
TseFI GTSAC 1 cut(s) 769
TseI GCWGC 1 cut(s) 496
Tsp45I GTSAC 1 cut(s) 769
TspRI CASTG 4 cut(s) 117, 412, 421, 585
Van91I CCANNNNNTGG 1 cut(s) 580
VpaK11BI GGWCC 2 cut(s) 344, 607
XceI RCATGY 1 cut(s) 779
XmaJI CCTAGG 1 cut(s) 317
XspI CTAG 6 cut(s) 318, 336, 546, 699, 732, 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.