DNA RNA polymerases superfamily protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 361 |
| AciI | CCGC | 1 cut(s) | 350 |
| AcvI | CACGTG | 1 cut(s) | 157 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 130 |
| Alw21I | GWGCWC | 1 cut(s) | 123 |
| Ama87I | CYCGRG | 1 cut(s) | 76 |
| AoxI | GGCC | 2 cut(s) | 159, 222 |
| ApeKI | GCWGC | 1 cut(s) | 17 |
| AspS9I | GGNCC | 1 cut(s) | 223 |
| AsuHPI | GGTGA | 1 cut(s) | 340 |
| AvaI | CYCGRG | 1 cut(s) | 76 |
| BbrPI | CACGTG | 1 cut(s) | 157 |
| Bbv12I | GWGCWC | 1 cut(s) | 123 |
| BbvI | GCAGC | 1 cut(s) | 29 |
| BccI | CCATC | 1 cut(s) | 292 |
| BfaI | CTAG | 2 cut(s) | 38, 198 |
| BglII | AGATCT | 1 cut(s) | 394 |
| BisI | GCNGC | 2 cut(s) | 18, 351 |
| BlsI | GCNGC | 2 cut(s) | 19, 352 |
| BmeT110I | CYCGRG | 1 cut(s) | 76 |
| BmgT120I | GGNCC | 1 cut(s) | 223 |
| BmiI | GGNNCC | 1 cut(s) | 213 |
| BpmI | CTGGAG | 2 cut(s) | 314, 419 |
| BsaAI | YACGTR | 2 cut(s) | 25, 157 |
| BsaJI | CCNNGG | 1 cut(s) | 75 |
| BsaWI | WCCGGW | 1 cut(s) | 384 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 130 |
| BseDI | CCNNGG | 1 cut(s) | 75 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 130 |
| BseMII | CTCAG | 1 cut(s) | 368 |
| BseRI | GAGGAG | 1 cut(s) | 240 |
| BseXI | GCAGC | 1 cut(s) | 29 |
| BshFI | GGCC | 2 cut(s) | 161, 224 |
| BsiHKAI | GWGCWC | 1 cut(s) | 123 |
| BsiHKCI | CYCGRG | 1 cut(s) | 76 |
| BsiSI | CCGG | 1 cut(s) | 385 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 130 |
| BsnI | GGCC | 2 cut(s) | 161, 224 |
| BsoBI | CYCGRG | 1 cut(s) | 76 |
| Bsp1286I | GDGCHC | 1 cut(s) | 123 |
| Bsp143I | GATC | 1 cut(s) | 394 |
| BspACI | CCGC | 1 cut(s) | 350 |
| BspANI | GGCC | 2 cut(s) | 161, 224 |
| BspCNI | CTCAG | 1 cut(s) | 367 |
| BspLI | GGNNCC | 1 cut(s) | 213 |
| BssECI | CCNNGG | 1 cut(s) | 75 |
| BssMI | GATC | 1 cut(s) | 394 |
| Bst4CI | ACNGT | 3 cut(s) | 90, 188, 240 |
| BstBAI | YACGTR | 2 cut(s) | 25, 157 |
| BstDEI | CTNAG | 1 cut(s) | 354 |
| BstKTI | GATC | 1 cut(s) | 397 |
| BstMBI | GATC | 1 cut(s) | 394 |
| BstSNI | TACGTA | 1 cut(s) | 25 |
| BstV1I | GCAGC | 1 cut(s) | 29 |
| BstX2I | RGATCY | 1 cut(s) | 394 |
| BstYI | RGATCY | 1 cut(s) | 394 |
| BsuRI | GGCC | 2 cut(s) | 161, 224 |
| BtsIMutI | CAGTG | 1 cut(s) | 245 |
| Cfr13I | GGNCC | 1 cut(s) | 223 |
| CviAII | CATG | 1 cut(s) | 208 |
| CviJI | RGCY | 5 cut(s) | 73, 161, 212, 224, 353 |
| CviKI_1 | RGCY | 5 cut(s) | 73, 161, 212, 224, 353 |
| DdeI | CTNAG | 1 cut(s) | 354 |
| DpnI | GATC | 1 cut(s) | 396 |
| DpnII | GATC | 1 cut(s) | 394 |
| Eco105I | TACGTA | 1 cut(s) | 25 |
| Eco72I | CACGTG | 1 cut(s) | 157 |
| Eco88I | CYCGRG | 1 cut(s) | 76 |
| EcoO109I | RGGNCCY | 1 cut(s) | 223 |
| FaeI | CATG | 1 cut(s) | 211 |
| FaiI | YATR | 9 cut(s) | 22, 131, 180, 209, 219, 231, 246, 256, 375 |
| FatI | CATG | 1 cut(s) | 207 |
| FblI | GTMKAC | 1 cut(s) | 361 |
| Fnu4HI | GCNGC | 2 cut(s) | 18, 351 |
| Fsp4HI | GCNGC | 2 cut(s) | 18, 351 |
| FspBI | CTAG | 2 cut(s) | 38, 198 |
| GluI | GCNGC | 2 cut(s) | 18, 351 |
| GsuI | CTGGAG | 2 cut(s) | 314, 419 |
| HaeIII | GGCC | 2 cut(s) | 161, 224 |
| HapII | CCGG | 1 cut(s) | 385 |
| Hin1II | CATG | 1 cut(s) | 211 |
| HincII | GTYRAC | 1 cut(s) | 47 |
| HindII | GTYRAC | 1 cut(s) | 47 |
| HpaII | CCGG | 1 cut(s) | 385 |
| HphI | GGTGA | 1 cut(s) | 340 |
| Hpy166II | GTNNAC | 2 cut(s) | 47, 362 |
| Hpy188I | TCNGA | 3 cut(s) | 140, 357, 408 |
| Hpy188III | TCNNGA | 2 cut(s) | 293, 398 |
| Hpy8I | GTNNAC | 2 cut(s) | 47, 362 |
| HpyCH4III | ACNGT | 3 cut(s) | 90, 188, 240 |
| HpyCH4IV | ACGT | 2 cut(s) | 24, 156 |
| HpyCH4V | TGCA | 3 cut(s) | 17, 304, 377 |
| HpyF3I | CTNAG | 1 cut(s) | 354 |
| HpySE526I | ACGT | 2 cut(s) | 24, 156 |
| Hsp92II | CATG | 1 cut(s) | 211 |
| Kzo9I | GATC | 1 cut(s) | 394 |
| LmnI | GCTCC | 2 cut(s) | 118, 217 |
| LpnPI | CCDG | 4 cut(s) | 117, 278, 383, 398 |
| Lsp1109I | GCAGC | 1 cut(s) | 29 |
| MaeI | CTAG | 2 cut(s) | 38, 198 |
| MaeII | ACGT | 2 cut(s) | 24, 156 |
| MaeIII | GTNAC | 2 cut(s) | 84, 93 |
| MalI | GATC | 1 cut(s) | 396 |
| MboI | GATC | 1 cut(s) | 394 |
| MboII | GAAGA | 1 cut(s) | 16 |
| MflI | RGATCY | 1 cut(s) | 394 |
| MhlI | GDGCHC | 1 cut(s) | 123 |
| MluCI | AATT | 3 cut(s) | 12, 142, 306 |
| MmeI | TCCRAC | 1 cut(s) | 239 |
| MnlI | CCTC | 5 cut(s) | 85, 134, 214, 261, 381 |
| MseI | TTAA | 2 cut(s) | 324, 345 |
| MslI | CAYNNNNRTG | 1 cut(s) | 206 |
| MspI | CCGG | 1 cut(s) | 385 |
| NdeII | GATC | 1 cut(s) | 394 |
| NlaIII | CATG | 1 cut(s) | 211 |
| NlaIV | GGNNCC | 1 cut(s) | 213 |
| PkrI | GCNGC | 2 cut(s) | 19, 352 |
| PmaCI | CACGTG | 1 cut(s) | 157 |
| PmlI | CACGTG | 1 cut(s) | 157 |
| Ppu21I | YACGTR | 2 cut(s) | 25, 157 |
| PspCI | CACGTG | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 1 cut(s) | 213 |
| PspPI | GGNCC | 1 cut(s) | 223 |
| PsuI | RGATCY | 1 cut(s) | 394 |
| RseI | CAYNNNNRTG | 1 cut(s) | 206 |
| SaqAI | TTAA | 2 cut(s) | 324, 345 |
| SatI | GCNGC | 2 cut(s) | 18, 351 |
| Sau3AI | GATC | 1 cut(s) | 394 |
| Sau96I | GGNCC | 1 cut(s) | 223 |
| SduI | GDGCHC | 1 cut(s) | 123 |
| SetI | ASST | 6 cut(s) | 27, 35, 126, 159, 330, 415 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 206 |
| SnaBI | TACGTA | 1 cut(s) | 25 |
| Sse9I | AATT | 3 cut(s) | 12, 142, 306 |
| SsiI | CCGC | 1 cut(s) | 350 |
| SspMI | CTAG | 2 cut(s) | 38, 198 |
| TaaI | ACNGT | 3 cut(s) | 90, 188, 240 |
| TaiI | ACGT | 2 cut(s) | 27, 159 |
| TasI | AATT | 3 cut(s) | 12, 142, 306 |
| TauI | GCSGC | 1 cut(s) | 353 |
| Tru1I | TTAA | 2 cut(s) | 324, 345 |
| Tru9I | TTAA | 2 cut(s) | 324, 345 |
| TscAI | CASTG | 1 cut(s) | 245 |
| TseI | GCWGC | 1 cut(s) | 17 |
| TspDTI | ATGAA | 2 cut(s) | 17, 279 |
| TspRI | CASTG | 1 cut(s) | 245 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 105, 111 |
| XmiI | GTMKAC | 1 cut(s) | 361 |
| XspI | CTAG | 2 cut(s) | 38, 198 |