FvH4_5g15792

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000094
Physical Location & Seq
Reverse (-)
8943021 .. 8944369
1349 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15792.t1

Sequence Viewer

Length: 1077 bp
ATGTATCGGATTTTGAAGGATTATTATTGGTGGCCAAACATGAAGAGGGAAATTGCAGCTTATGTGAGTAGATGTCTGATTTGTCAGCAAGTCAAGGCTGAAAGGCAGAAGCCTTCAGGATTGCTTGAGCCGTTGCCTATTCCAGTGTGGAAGTGGGACCACATCACCATGGATTTTGTTTTTAGCTTACCTCGTACCCGTGATGGGCATGACGGTATTTGGGTGATTGTGGATAGACTCACCAAGTCTGCACATTTCTTGCTAGTGGGAAAGAAGTATAAATTAGATAAATTGGCGGAGCTCTATGTGAATGAAATTGTGAGGCTTCATGGTGTTCCTGAATCAATAGTGTCAGATCGGGACCCTCGATTTGCTTCTAAATTCTGGGGAGCTCTTCAGGCAGCTTTAGGTACCCAATTACTCTTCAGCACTGCTTTTCATCCTCAGACTGATGGGCAGTCCGAGAGGACTATTCAGACTTTGGAGGATATGTTGAGGGCTTGTGCCATGCAGTTCAGAGGGGAAAAAGAGCTTTGTGGCCCAGAGTTAATCCATGTTACGAATGAGAAGATTAAAGTGGTTAGAGATAGACTCAAGACTGCTCAGAGTAGGCAGAAAAGTTATGCGGATGTCCGTAGGAGAGATCTTGAATTTCAAGTGGGTGATTGGGTGTTCCTGAAATTATCTCCTTGGAAAGGGATTGTGCGTTTCGGTAAGCGTGGGAAGCTTAGCCCGAGGTATATTGGCCCTTATGAGATTATAGAGCGAGTTGGCTCACTTGCTTATCGATTAGCCTTGCCTCCAGAGTTAGCTAGGATACATAAGGTGTTTCATGTATCCATGCTTCGCAAGTATATTGCCGATCCTTCTCATGTGCTGCAAGAGCAACCGATCAGTTTGACGAGAGATTTGACCTATGAAGAGAAACCGGTTCAGATTCTCGACCGAAAGGAGCAAGTGCTTAGGAACAAGACAATCCCGCTTGTCAAGGTGCTGTGGAGAAGTCATCAAGTAGAAGAAGCTACTTGGGAATCAGAGGAGCAAACGATGCAGCAGTATCCGTATCTCTTCGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2 RVT_1 Retrotrans_gag rve zf-CCHC

Protein Analysis

359

Amino Acids

42.02

Weight (kDa)

9.46

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Integrase_H2C2 PF17921 1 - 33 4.9e-10 Integrase zinc binding domain
SH3_Tf2-1 PF24626 221 - 285 8.9e-28 Tf2-1-like, SH3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42190
fragaria_vesca FvH4_1g22371 FvH4_1g23261 FvH4_1g27933 FvH4_1g27934 FvH4_1g29231 FvH4_2g02781 FvH4_2g08031 FvH4_2g08581 FvH4_3g06961 FvH4_3g06962 FvH4_3g13531 FvH4_3g14391 FvH4_3g14392 FvH4_3g18622 FvH4_3g18964 FvH4_3g26314 FvH4_3g28781 FvH4_3g30771 FvH4_3g30772 FvH4_3g31752 FvH4_3g32803 FvH4_3g35751 FvH4_3g35752 FvH4_4g02151 FvH4_4g02642 FvH4_4g05523 FvH4_4g05524 FvH4_4g06574 FvH4_4g06722 FvH4_4g08644 FvH4_4g08645 FvH4_4g08646 FvH4_4g08851 FvH4_4g08971 FvH4_4g09081 FvH4_4g09243 FvH4_4g09244 FvH4_4g09283 FvH4_4g10021 FvH4_4g10032 FvH4_4g10033 FvH4_4g10182 FvH4_4g10361 FvH4_4g12502 FvH4_4g12503 FvH4_4g13341 FvH4_4g13942 FvH4_4g13943 FvH4_4g13944 FvH4_4g14432 FvH4_4g14822 FvH4_4g14823 FvH4_4g15291 FvH4_4g15292 FvH4_4g15293 FvH4_4g15471 FvH4_4g15583 FvH4_4g15584 FvH4_4g15585 FvH4_4g15586 FvH4_4g15587 FvH4_4g15591 FvH4_4g15592 FvH4_4g15593 FvH4_4g16179 FvH4_4g18131 FvH4_4g21031 FvH4_4g22021 FvH4_4g22021 FvH4_4g22042 FvH4_5g03402 FvH4_5g07411 FvH4_5g13881 FvH4_5g15792 FvH4_5g24682 FvH4_5g24911 FvH4_5g25322 FvH4_5g25641 FvH4_5g36692 FvH4_5g38072 FvH4_5g38171 FvH4_6g05202 FvH4_6g08531 FvH4_6g16342 FvH4_6g21771 FvH4_6g23303 FvH4_6g23961 FvH4_6g25381 FvH4_6g27021 FvH4_6g27022 FvH4_6g30091 FvH4_6g30092 FvH4_7g02051 FvH4_7g06031 FvH4_7g07031 FvH4_7g07581 FvH4_7g08381 FvH4_7g11551 FvH4_7g19711 FvH4_7g25621 FvH4_7g29722
malus_domestica MD06G1134500.v1.1 MD09G1067600.v1.1 MD13G1145500.v1.1 MD15G1166500.v1.1 MD16G1270000.v1.1
prunus_persica Prupe.7G030900_v2.0.a1
pyrus_communis pycom01g00710 pycom01g03760 pycom03g10770 pycom04g02180 pycom05g08050 pycom06g04140 pycom06g11110 pycom07g07550 pycom07g21570 pycom08g17240 pycom09g13900 pycom09g19570 pycom10g22300 pycom11g03210 pycom11g13750 pycom11g24890 pycom12561g00270 pycom12668g00020 pycom12g11280 pycom12g20720 pycom12g20730 pycom13g21410 pycom13g21660 pycom14g06010 pycom14g06370 pycom14g12800 pycom16g21440 pycom16g22530 pycom17g02030 pycom420g00170 pycom50g00020 pycom5153684g00110 pycom520g00860 pycom581g00060
rosa_chinensis RchiOBHm_Chr0c08g0498091 RchiOBHm_Chr0c08g0498101 RchiOBHm_Chr1g0326991 RchiOBHm_Chr2g0084311 RchiOBHm_Chr2g0090701 RchiOBHm_Chr2g0098591 RchiOBHm_Chr2g0109491 RchiOBHm_Chr2g0109501 RchiOBHm_Chr2g0130801 RchiOBHm_Chr2g0145931 RchiOBHm_Chr2g0168091 RchiOBHm_Chr3g0457081 RchiOBHm_Chr3g0457091 RchiOBHm_Chr3g0467781 RchiOBHm_Chr3g0467791 RchiOBHm_Chr3g0493771 RchiOBHm_Chr3g0494051 RchiOBHm_Chr3g0496881 RchiOBHm_Chr4g0401391 RchiOBHm_Chr4g0414861 RchiOBHm_Chr4g0424081 RchiOBHm_Chr5g0009611 RchiOBHm_Chr5g0049881 RchiOBHm_Chr5g0050351 RchiOBHm_Chr5g0053791 RchiOBHm_Chr5g0078031 RchiOBHm_Chr6g0256481 RchiOBHm_Chr6g0271231 RchiOBHm_Chr6g0286381 RchiOBHm_Chr7g0197101 RchiOBHm_Chr7g0221891 RchiOBHm_Chr7g0237801 RchiOBHm_Chr7g0237821
rosa_multiflora Rmu_sc0000509.1_g000034 Rmu_sc0004751.1_g000014 Rmu_sc0008546.1_g000002 Rmu_sc0009320.1_g000003 Rmu_sc0010661.1_g000006 Rmu_sc0029652.1_g000002
rosa_roxburghii Rroxscaffold_10G00433150 Rroxscaffold_15G00447630 Rroxscaffold_26G00447790 Rroxscaffold_29G00441810 Rroxscaffold_32G00442860 Rroxscaffold_33G00439800 Rroxscaffold_34G00443230 Rroxscaffold_3G00220560 Rroxscaffold_3G00227370 Rroxscaffold_3G00239080 Rroxscaffold_3G00239090 Rroxscaffold_3G00273190 Rroxscaffold_4G00323530 Rroxscaffold_4G00326840 Rroxscaffold_57G00443110 Rroxscaffold_5G00338590 Rroxscaffold_5G00347530 Rroxscaffold_68G00446990 Rroxscaffold_76G00448570 Rroxscaffold_90G00448860
rosa_rugosa Rorug06G0233600
rosa_samantha Rh3CG302700 Rh6DG286700
rosa_wichuraiana Rw0G002280 Rw0G004080 Rw0G011830 Rw1G003690 Rw1G008800 Rw1G009130 Rw1G009140 Rw1G009150 Rw1G009160 Rw1G009410 Rw1G009580 Rw1G012770 Rw1G015850 Rw1G026860 Rw2G003780 Rw2G006480 Rw2G016520 Rw2G016960 Rw2G018170 Rw2G025180 Rw2G025510 Rw2G025610 Rw2G025750 Rw2G025920 Rw2G029950 Rw2G046360 Rw2G046370 Rw2G046380 Rw3G009070 Rw3G025820 Rw3G027340 Rw3G027900 Rw3G028150 Rw3G029060 Rw4G002440 Rw4G005960 Rw4G007520 Rw4G011970 Rw4G011980 Rw4G012190 Rw4G012530 Rw4G018490 Rw4G026380 Rw5G003970 Rw5G030920 Rw5G031780 Rw5G031900 Rw5G033030 Rw5G033040 Rw5G036330 Rw5G039730 Rw5G048110 Rw6G006670 Rw6G007910 Rw6G009720 Rw6G010990 Rw6G012930 Rw6G012940 Rw6G013420 Rw6G014690 Rw6G015290 Rw6G015790 Rw6G015920 Rw6G036510 Rw7G016650 Rw7G023140 Rw7G028650 Rw7G036450 Rw7G036460 Rw7G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 410
AccB1I GGYRCC 1 cut(s) 410
AciI CCGC 3 cut(s) 296, 626, 980
AclWI GGATC 1 cut(s) 857
AcoI YGGCCR 1 cut(s) 32
AcsI RAATTY 2 cut(s) 380, 650
AcuI CTGAAG 3 cut(s) 99, 380, 409
AfaI GTAC 2 cut(s) 196, 412
AfiI CCNNNNNNNGG 2 cut(s) 204, 695
AgeI ACCGGT 1 cut(s) 928
AgsI TTSAA 3 cut(s) 16, 650, 656
AluBI AGCT 9 cut(s) 59, 186, 301, 392, 404, 532, 727, 812, 1022
AluI AGCT 9 cut(s) 59, 186, 301, 392, 404, 532, 727, 812, 1022
Alw21I GWGCWC 2 cut(s) 303, 394
AlwI GGATC 1 cut(s) 857
Ama87I CYCGRG 1 cut(s) 733
AoxI GGCC 3 cut(s) 32, 538, 745
ApeKI GCWGC 4 cut(s) 56, 401, 877, 1051
ApoI RAATTY 2 cut(s) 380, 650
ArsI GACNNNNNNTTYG 4 cut(s) 353, 385, 892, 924
AsiGI ACCGGT 1 cut(s) 928
Asp718I GGTACC 1 cut(s) 410
AspS9I GGNCC 4 cut(s) 157, 361, 539, 746
AsuHPI GGTGA 4 cut(s) 157, 232, 235, 674
AvaI CYCGRG 1 cut(s) 733
AvaII GGWCC 2 cut(s) 157, 361
BalI TGGCCA 1 cut(s) 34
BanI GGYRCC 1 cut(s) 410
BanII GRGCYC 2 cut(s) 303, 394
BarI GAAGNNNNNNTAC 2 cut(s) 828, 860
Bbv12I GWGCWC 2 cut(s) 303, 394
BbvI GCAGC 4 cut(s) 68, 413, 864, 1063
BccI CCATC 2 cut(s) 197, 446
BceAI ACGGC 1 cut(s) 115
BciVI GTATCC 3 cut(s) 810, 847, 1068
BfaI CTAG 2 cut(s) 263, 813
BfuI GTATCC 3 cut(s) 810, 847, 1068
BglII AGATCT 1 cut(s) 643
BisI GCNGC 4 cut(s) 57, 402, 878, 1052
BlpI GCTNAGC 1 cut(s) 728
BlsI GCNGC 4 cut(s) 58, 403, 879, 1053
Bme18I GGWCC 2 cut(s) 157, 361
BmeT110I CYCGRG 1 cut(s) 733
BmgT120I GGNCC 4 cut(s) 157, 361, 539, 746
BmiI GGNNCC 4 cut(s) 158, 362, 363, 412
BmsI GCATC 1 cut(s) 1038
BplI GAGNNNNNCTC 2 cut(s) 576, 608
BpmI CTGGAG 1 cut(s) 786
Bpu10I CCTNAGC 1 cut(s) 962
Bpu1102I GCTNAGC 1 cut(s) 728
BpuEI CTTGAG 2 cut(s) 146, 578
Bsa29I ATCGAT 1 cut(s) 787
BsaJI CCNNGG 3 cut(s) 168, 689, 734
BsaWI WCCGGW 1 cut(s) 928
BsaXI ACNNNNNCTCC 2 cut(s) 476, 506
Bsc4I CCNNNNNNNGG 2 cut(s) 204, 695
Bse118I RCCGGY 1 cut(s) 928
Bse1I ACTGG 1 cut(s) 143
BseCI ATCGAT 1 cut(s) 787
BseDI CCNNGG 3 cut(s) 168, 689, 734
BseGI GGATG 2 cut(s) 439, 634
BseLI CCNNNNNNNGG 2 cut(s) 204, 695
BseMII CTCAG 2 cut(s) 458, 617
BseNI ACTGG 1 cut(s) 143
BseRI GAGGAG 1 cut(s) 1052
BseXI GCAGC 4 cut(s) 68, 413, 864, 1063
BsgI GTGCAG 1 cut(s) 234
Bsh1285I CGRYCG 1 cut(s) 946
BshFI GGCC 3 cut(s) 34, 540, 747
BshNI GGYRCC 1 cut(s) 410
BshTI ACCGGT 1 cut(s) 928
BshVI ATCGAT 1 cut(s) 787
BsiEI CGRYCG 1 cut(s) 946
BsiHKAI GWGCWC 2 cut(s) 303, 394
BsiHKCI CYCGRG 1 cut(s) 733
BsiSI CCGG 1 cut(s) 929
BslFI GGGAC 2 cut(s) 170, 374
BslI CCNNNNNNNGG 2 cut(s) 204, 695
BsmFI GGGAC 2 cut(s) 170, 374
BsnI GGCC 3 cut(s) 34, 540, 747
BsoBI CYCGRG 1 cut(s) 733
Bsp1286I GDGCHC 2 cut(s) 303, 394
Bsp143I GATC 4 cut(s) 355, 643, 862, 891
Bsp1720I GCTNAGC 1 cut(s) 728
Bsp19I CCATGG 1 cut(s) 168
BspACI CCGC 3 cut(s) 296, 626, 980
BspANI GGCC 3 cut(s) 34, 540, 747
BspCNI CTCAG 2 cut(s) 457, 616
BspDI ATCGAT 1 cut(s) 787
BspLI GGNNCC 4 cut(s) 158, 362, 363, 412
BspPI GGATC 1 cut(s) 857
BspQI GCTCTTC 1 cut(s) 399
BspT107I GGYRCC 1 cut(s) 410
BsrFI RCCGGY 1 cut(s) 928
BsrI ACTGG 1 cut(s) 143
BssAI RCCGGY 1 cut(s) 928
BssECI CCNNGG 3 cut(s) 168, 689, 734
BssMI GATC 4 cut(s) 355, 643, 862, 891
BssT1I CCWWGG 2 cut(s) 168, 689
Bst4CI ACNGT 1 cut(s) 215
Bst6I CTCTTC 5 cut(s) 38, 399, 428, 915, 1073
BstAPI GCANNNNNTGC 1 cut(s) 1048
BstDEI CTNAG 4 cut(s) 444, 603, 728, 962
BstDSI CCRYGG 1 cut(s) 168
BstENI CCTNNNNNAGG 1 cut(s) 693
BstF5I GGATG 2 cut(s) 439, 634
BstKTI GATC 4 cut(s) 358, 646, 865, 894
BstMBI GATC 4 cut(s) 355, 643, 862, 891
BstMCI CGRYCG 1 cut(s) 946
BstMWI GCNNNNNNNGC 4 cut(s) 398, 724, 883, 1048
BstV1I GCAGC 4 cut(s) 68, 413, 864, 1063
BstX2I RGATCY 1 cut(s) 643
BstYI RGATCY 1 cut(s) 643
Bsu15I ATCGAT 1 cut(s) 787
BsuI GTATCC 3 cut(s) 810, 847, 1068
BsuRI GGCC 3 cut(s) 34, 540, 747
BsuTUI ATCGAT 1 cut(s) 787
BtgI CCRYGG 1 cut(s) 168
BtsCI GGATG 2 cut(s) 439, 634
BtsI GCAGTG 1 cut(s) 429
BtsIMutI CAGTG 2 cut(s) 150, 429
Cfr10I RCCGGY 1 cut(s) 928
Cfr13I GGNCC 4 cut(s) 157, 361, 539, 746
ClaI ATCGAT 1 cut(s) 787
Csp6I GTAC 2 cut(s) 195, 411
CspAI ACCGGT 1 cut(s) 928
CviAII CATG 9 cut(s) 40, 169, 209, 329, 508, 554, 833, 841, 872
CviQI GTAC 2 cut(s) 195, 411
DdeI CTNAG 4 cut(s) 444, 603, 728, 962
DpnI GATC 4 cut(s) 357, 645, 864, 893
DpnII GATC 4 cut(s) 355, 643, 862, 891
EaeI YGGCCR 1 cut(s) 32
Eam1104I CTCTTC 5 cut(s) 38, 399, 428, 915, 1073
EarI CTCTTC 5 cut(s) 38, 399, 428, 915, 1073
EciI GGCGGA 1 cut(s) 311
Ecl136II GAGCTC 2 cut(s) 301, 392
Eco130I CCWWGG 2 cut(s) 168, 689
Eco24I GRGCYC 2 cut(s) 303, 394
Eco47I GGWCC 2 cut(s) 157, 361
Eco53kI GAGCTC 2 cut(s) 301, 392
Eco57I CTGAAG 3 cut(s) 99, 380, 409
Eco88I CYCGRG 1 cut(s) 733
EcoICRI GAGCTC 2 cut(s) 301, 392
EcoNI CCTNNNNNAGG 1 cut(s) 693
EcoO109I RGGNCCY 1 cut(s) 361
EcoT14I CCWWGG 2 cut(s) 168, 689
EcoT38I GRGCYC 2 cut(s) 303, 394
ErhI CCWWGG 2 cut(s) 168, 689
FaeI CATG 9 cut(s) 43, 172, 212, 332, 511, 557, 836, 844, 875
FaqI GGGAC 2 cut(s) 170, 374
FatI CATG 9 cut(s) 39, 168, 208, 328, 507, 553, 832, 840, 871
FauI CCCGC 1 cut(s) 987
Fnu4HI GCNGC 4 cut(s) 57, 402, 878, 1052
FokI GGATG 2 cut(s) 426, 641
FriOI GRGCYC 2 cut(s) 303, 394
Fsp4HI GCNGC 4 cut(s) 57, 402, 878, 1052
FspBI CTAG 2 cut(s) 263, 813
GluI GCNGC 4 cut(s) 57, 402, 878, 1052
GsuI CTGGAG 1 cut(s) 786
HaeIII GGCC 3 cut(s) 34, 540, 747
HapII CCGG 1 cut(s) 929
Hin1II CATG 9 cut(s) 43, 172, 212, 332, 511, 557, 836, 844, 875
HindIII AAGCTT 1 cut(s) 725
HinfI GANTC 5 cut(s) 237, 341, 591, 937, 1031
HpaII CCGG 1 cut(s) 929
HphI GGTGA 4 cut(s) 157, 232, 235, 674
Hpy188III TCNNGA 8 cut(s) 117, 338, 359, 595, 647, 676, 803, 941
HpyAV CCTTC 3 cut(s) 10, 123, 876
HpyCH4III ACNGT 1 cut(s) 215
HpyCH4V TGCA 5 cut(s) 56, 251, 511, 880, 1051
HpyF10VI GCNNNNNNNGC 4 cut(s) 398, 724, 883, 1048
HpyF3I CTNAG 4 cut(s) 444, 603, 728, 962
Hsp92II CATG 9 cut(s) 43, 172, 212, 332, 511, 557, 836, 844, 875
KflI GGGWCCC 1 cut(s) 361
KpnI GGTACC 1 cut(s) 414
Kzo9I GATC 4 cut(s) 355, 643, 862, 891
LguI GCTCTTC 1 cut(s) 399
LmnI GCTCC 4 cut(s) 298, 389, 952, 1039
LpnPI CCDG 9 cut(s) 102, 156, 351, 370, 383, 555, 689, 816, 942
Lsp1109I GCAGC 4 cut(s) 68, 413, 864, 1063
LweI GCATC 1 cut(s) 1038
MaeI CTAG 2 cut(s) 263, 813
MaeIII GTNAC 1 cut(s) 556
MalI GATC 4 cut(s) 357, 645, 864, 893
MboI GATC 4 cut(s) 355, 643, 862, 891
MboII GAAGA 7 cut(s) 55, 386, 415, 580, 932, 1028, 1060
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 2 cut(s) 303, 394
MlsI TGGCCA 1 cut(s) 34
MluCI AATT 8 cut(s) 51, 281, 290, 315, 380, 416, 650, 680
MluNI TGGCCA 1 cut(s) 34
MlyI GAGTC 2 cut(s) 231, 585
Mox20I TGGCCA 1 cut(s) 34
MscI TGGCCA 1 cut(s) 34
MseI TTAA 2 cut(s) 548, 573
MslI CAYNNNNRTG 1 cut(s) 167
Msp20I TGGCCA 1 cut(s) 34
MspI CCGG 1 cut(s) 929
MwoI GCNNNNNNNGC 4 cut(s) 398, 724, 883, 1048
NcoI CCATGG 1 cut(s) 168
NdeII GATC 4 cut(s) 355, 643, 862, 891
NlaIII CATG 9 cut(s) 43, 172, 212, 332, 511, 557, 836, 844, 875
NlaIV GGNNCC 4 cut(s) 158, 362, 363, 412
PciSI GCTCTTC 1 cut(s) 399
PcsI WCGNNNNNNNCGW 1 cut(s) 364
PfeI GAWTC 3 cut(s) 341, 937, 1031
PinAI ACCGGT 1 cut(s) 928
PkrI GCNGC 4 cut(s) 58, 403, 879, 1053
PleI GAGTC 2 cut(s) 231, 585
PpsI GAGTC 2 cut(s) 231, 585
PpuMI RGGWCCY 1 cut(s) 361
Psp124BI GAGCTC 2 cut(s) 303, 394
Psp5II RGGWCCY 1 cut(s) 361
PspN4I GGNNCC 4 cut(s) 158, 362, 363, 412
PspPI GGNCC 4 cut(s) 157, 361, 539, 746
PspPPI RGGWCCY 1 cut(s) 361
PsuI RGATCY 1 cut(s) 643
RsaI GTAC 2 cut(s) 196, 412
RsaNI GTAC 2 cut(s) 195, 411
RseI CAYNNNNRTG 1 cut(s) 167
SacI GAGCTC 2 cut(s) 303, 394
SapI GCTCTTC 1 cut(s) 399
SaqAI TTAA 2 cut(s) 548, 573
SatI GCNGC 4 cut(s) 57, 402, 878, 1052
Sau3AI GATC 4 cut(s) 355, 643, 862, 891
Sau96I GGNCC 4 cut(s) 157, 361, 539, 746
SchI GAGTC 2 cut(s) 231, 585
SduI GDGCHC 2 cut(s) 303, 394
SfaNI GCATC 1 cut(s) 1038
SinI GGWCC 2 cut(s) 157, 361
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 2 cut(s) 125, 593
SmoI CTYRAG 2 cut(s) 125, 593
Sse9I AATT 8 cut(s) 51, 281, 290, 315, 380, 416, 650, 680
SsiI CCGC 3 cut(s) 296, 626, 980
SspMI CTAG 2 cut(s) 263, 813
SstI GAGCTC 2 cut(s) 303, 394
StyI CCWWGG 2 cut(s) 168, 689
TaaI ACNGT 1 cut(s) 215
TaqI TCGA 3 cut(s) 367, 787, 942
TaqII GACCGA 1 cut(s) 960
TasI AATT 8 cut(s) 51, 281, 290, 315, 380, 416, 650, 680
TfiI GAWTC 3 cut(s) 341, 937, 1031
Tru1I TTAA 2 cut(s) 548, 573
Tru9I TTAA 2 cut(s) 548, 573
TscAI CASTG 2 cut(s) 150, 436
TseI GCWGC 4 cut(s) 56, 401, 877, 1051
TspDTI ATGAA 6 cut(s) 56, 317, 327, 428, 821, 933
TspGWI ACGGA 2 cut(s) 623, 1050
TspRI CASTG 2 cut(s) 150, 436
VpaK11BI GGWCC 2 cut(s) 157, 361
XagI CCTNNNNNAGG 1 cut(s) 693
XapI RAATTY 2 cut(s) 380, 650
XcmI CCANNNNNNNNNTGG 1 cut(s) 150
XspI CTAG 2 cut(s) 263, 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.