transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 8, 301 |
| AclWI | GGATC | 1 cut(s) | 212 |
| AcoI | YGGCCR | 1 cut(s) | 339 |
| AfaI | GTAC | 1 cut(s) | 524 |
| AgsI | TTSAA | 1 cut(s) | 103 |
| AluBI | AGCT | 5 cut(s) | 115, 142, 194, 440, 488 |
| AluI | AGCT | 5 cut(s) | 115, 142, 194, 440, 488 |
| Alw21I | GWGCWC | 1 cut(s) | 196 |
| Alw26I | GTCTC | 3 cut(s) | 33, 169, 230 |
| AlwI | GGATC | 1 cut(s) | 212 |
| Ama87I | CYCGRG | 1 cut(s) | 36 |
| AoxI | GGCC | 1 cut(s) | 339 |
| ApeKI | GCWGC | 3 cut(s) | 64, 146, 476 |
| AsuC2I | CCSGG | 1 cut(s) | 321 |
| AvaI | CYCGRG | 1 cut(s) | 36 |
| BanII | GRGCYC | 1 cut(s) | 196 |
| Bbv12I | GWGCWC | 1 cut(s) | 196 |
| BbvI | GCAGC | 3 cut(s) | 76, 133, 488 |
| BccI | CCATC | 1 cut(s) | 267 |
| BceAI | ACGGC | 1 cut(s) | 134 |
| BcnI | CCSGG | 1 cut(s) | 321 |
| BcoDI | GTCTC | 3 cut(s) | 33, 169, 230 |
| BfaI | CTAG | 3 cut(s) | 93, 489, 553 |
| BfmI | CTRYAG | 2 cut(s) | 441, 474 |
| BisI | GCNGC | 3 cut(s) | 65, 147, 477 |
| BlsI | GCNGC | 3 cut(s) | 66, 148, 478 |
| Bme1390I | CCNGG | 1 cut(s) | 321 |
| BmeT110I | CYCGRG | 1 cut(s) | 36 |
| BmiI | GGNNCC | 1 cut(s) | 417 |
| BmrFI | CCNGG | 1 cut(s) | 321 |
| BmsI | GCATC | 3 cut(s) | 21, 51, 334 |
| BpuEI | CTTGAG | 2 cut(s) | 158, 280 |
| BpuMI | CCSGG | 1 cut(s) | 321 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 32 |
| BseGI | GGATG | 1 cut(s) | 316 |
| BseXI | GCAGC | 3 cut(s) | 76, 133, 488 |
| BshFI | GGCC | 1 cut(s) | 341 |
| BsiHKAI | GWGCWC | 1 cut(s) | 196 |
| BsiHKCI | CYCGRG | 1 cut(s) | 36 |
| BsiSI | CCGG | 1 cut(s) | 321 |
| BsmAI | GTCTC | 3 cut(s) | 33, 169, 230 |
| BsnI | GGCC | 1 cut(s) | 341 |
| BsoBI | CYCGRG | 1 cut(s) | 36 |
| Bsp1286I | GDGCHC | 1 cut(s) | 196 |
| Bsp143I | GATC | 3 cut(s) | 133, 204, 214 |
| BspACI | CCGC | 2 cut(s) | 8, 301 |
| BspANI | GGCC | 1 cut(s) | 341 |
| BspHI | TCATGA | 1 cut(s) | 540 |
| BspLI | GGNNCC | 1 cut(s) | 417 |
| BspMAI | CTGCAG | 1 cut(s) | 478 |
| BspPI | GGATC | 1 cut(s) | 212 |
| BspQI | GCTCTTC | 1 cut(s) | 319 |
| BssMI | GATC | 3 cut(s) | 133, 204, 214 |
| Bst4CI | ACNGT | 1 cut(s) | 409 |
| Bst6I | CTCTTC | 1 cut(s) | 319 |
| BstC8I | GCNNGC | 1 cut(s) | 144 |
| BstF5I | GGATG | 1 cut(s) | 316 |
| BstKTI | GATC | 3 cut(s) | 136, 207, 217 |
| BstMAI | GTCTC | 3 cut(s) | 33, 169, 230 |
| BstMBI | GATC | 3 cut(s) | 133, 204, 214 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 112, 437, 485 |
| BstSCI | CCNGG | 1 cut(s) | 319 |
| BstSFI | CTRYAG | 2 cut(s) | 441, 474 |
| BstV1I | GCAGC | 3 cut(s) | 76, 133, 488 |
| BstX2I | RGATCY | 1 cut(s) | 204 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 204 |
| BsuRI | GGCC | 1 cut(s) | 341 |
| BtsCI | GGATG | 1 cut(s) | 316 |
| Cac8I | GCNNGC | 1 cut(s) | 144 |
| CciI | TCATGA | 1 cut(s) | 540 |
| Csp6I | GTAC | 1 cut(s) | 523 |
| CviAII | CATG | 4 cut(s) | 110, 131, 497, 541 |
| CviJI | RGCY | 9 cut(s) | 106, 115, 142, 194, 329, 341, 440, 479, 488 |
| CviKI_1 | RGCY | 9 cut(s) | 106, 115, 142, 194, 329, 341, 440, 479, 488 |
| CviQI | GTAC | 1 cut(s) | 523 |
| DpnI | GATC | 3 cut(s) | 135, 206, 216 |
| DpnII | GATC | 3 cut(s) | 133, 204, 214 |
| EaeI | YGGCCR | 1 cut(s) | 339 |
| Eam1104I | CTCTTC | 1 cut(s) | 319 |
| EarI | CTCTTC | 1 cut(s) | 319 |
| Ecl136II | GAGCTC | 1 cut(s) | 194 |
| Eco24I | GRGCYC | 1 cut(s) | 196 |
| Eco53kI | GAGCTC | 1 cut(s) | 194 |
| Eco88I | CYCGRG | 1 cut(s) | 36 |
| EcoICRI | GAGCTC | 1 cut(s) | 194 |
| EcoT22I | ATGCAT | 1 cut(s) | 433 |
| EcoT38I | GRGCYC | 1 cut(s) | 196 |
| FaeI | CATG | 4 cut(s) | 113, 134, 500, 544 |
| FatI | CATG | 4 cut(s) | 109, 130, 496, 540 |
| Fnu4HI | GCNGC | 3 cut(s) | 65, 147, 477 |
| FokI | GGATG | 1 cut(s) | 303 |
| FriOI | GRGCYC | 1 cut(s) | 196 |
| Fsp4HI | GCNGC | 3 cut(s) | 65, 147, 477 |
| FspBI | CTAG | 3 cut(s) | 93, 489, 553 |
| GluI | GCNGC | 3 cut(s) | 65, 147, 477 |
| HaeIII | GGCC | 1 cut(s) | 341 |
| HapII | CCGG | 1 cut(s) | 321 |
| Hin1II | CATG | 4 cut(s) | 113, 134, 500, 544 |
| HinfI | GANTC | 4 cut(s) | 223, 470, 508, 547 |
| HpaII | CCGG | 1 cut(s) | 321 |
| Hpy188I | TCNGA | 2 cut(s) | 126, 204 |
| Hpy188III | TCNNGA | 4 cut(s) | 38, 93, 137, 541 |
| HpyAV | CCTTC | 1 cut(s) | 396 |
| HpyCH4III | ACNGT | 1 cut(s) | 409 |
| HpyCH4IV | ACGT | 1 cut(s) | 75 |
| HpyCH4V | TGCA | 3 cut(s) | 64, 431, 476 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 112, 437, 485 |
| HpySE526I | ACGT | 1 cut(s) | 75 |
| Hsp92II | CATG | 4 cut(s) | 113, 134, 500, 544 |
| Kzo9I | GATC | 3 cut(s) | 133, 204, 214 |
| LguI | GCTCTTC | 1 cut(s) | 319 |
| LmnI | GCTCC | 1 cut(s) | 191 |
| LpnPI | CCDG | 3 cut(s) | 334, 339, 429 |
| Lsp1109I | GCAGC | 3 cut(s) | 76, 133, 488 |
| LweI | GCATC | 3 cut(s) | 21, 51, 334 |
| MaeI | CTAG | 3 cut(s) | 93, 489, 553 |
| MaeII | ACGT | 1 cut(s) | 75 |
| MaeIII | GTNAC | 3 cut(s) | 375, 393, 460 |
| MalI | GATC | 3 cut(s) | 135, 206, 216 |
| MboI | GATC | 3 cut(s) | 133, 204, 214 |
| MboII | GAAGA | 1 cut(s) | 336 |
| MfeI | CAATTG | 1 cut(s) | 98 |
| MflI | RGATCY | 1 cut(s) | 204 |
| MhlI | GDGCHC | 1 cut(s) | 196 |
| MluCI | AATT | 5 cut(s) | 98, 118, 153, 281, 535 |
| MlyI | GAGTC | 1 cut(s) | 232 |
| MmeI | TCCRAC | 3 cut(s) | 149, 182, 253 |
| MnlI | CCTC | 4 cut(s) | 45, 100, 255, 391 |
| Mph1103I | ATGCAT | 1 cut(s) | 433 |
| MseI | TTAA | 2 cut(s) | 165, 288 |
| MspI | CCGG | 1 cut(s) | 321 |
| MspR9I | CCNGG | 1 cut(s) | 321 |
| MunI | CAATTG | 1 cut(s) | 98 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 112, 437, 485 |
| NciI | CCSGG | 1 cut(s) | 321 |
| NdeII | GATC | 3 cut(s) | 133, 204, 214 |
| NlaIII | CATG | 4 cut(s) | 113, 134, 500, 544 |
| NlaIV | GGNNCC | 1 cut(s) | 417 |
| NmuCI | GTSAC | 2 cut(s) | 393, 460 |
| NsiI | ATGCAT | 1 cut(s) | 433 |
| PaeR7I | CTCGAG | 1 cut(s) | 36 |
| PagI | TCATGA | 1 cut(s) | 540 |
| PciSI | GCTCTTC | 1 cut(s) | 319 |
| PfeI | GAWTC | 3 cut(s) | 470, 508, 547 |
| PfoI | TCCNGGA | 1 cut(s) | 319 |
| PkrI | GCNGC | 3 cut(s) | 66, 148, 478 |
| PleI | GAGTC | 1 cut(s) | 231 |
| PpsI | GAGTC | 1 cut(s) | 231 |
| Psp124BI | GAGCTC | 1 cut(s) | 196 |
| PspN4I | GGNNCC | 1 cut(s) | 417 |
| PstI | CTGCAG | 1 cut(s) | 478 |
| PsuI | RGATCY | 1 cut(s) | 204 |
| RsaI | GTAC | 1 cut(s) | 524 |
| RsaNI | GTAC | 1 cut(s) | 523 |
| SacI | GAGCTC | 1 cut(s) | 196 |
| SapI | GCTCTTC | 1 cut(s) | 319 |
| SaqAI | TTAA | 2 cut(s) | 165, 288 |
| SatI | GCNGC | 3 cut(s) | 65, 147, 477 |
| Sau3AI | GATC | 3 cut(s) | 133, 204, 214 |
| SchI | GAGTC | 1 cut(s) | 232 |
| ScrFI | CCNGG | 1 cut(s) | 321 |
| SduI | GDGCHC | 1 cut(s) | 196 |
| SetI | ASST | 6 cut(s) | 78, 117, 144, 196, 442, 490 |
| SfaNI | GCATC | 3 cut(s) | 21, 51, 334 |
| SfcI | CTRYAG | 2 cut(s) | 441, 474 |
| Sfr274I | CTCGAG | 1 cut(s) | 36 |
| SlaI | CTCGAG | 1 cut(s) | 36 |
| SmlI | CTYRAG | 3 cut(s) | 36, 137, 259 |
| SmoI | CTYRAG | 3 cut(s) | 36, 137, 259 |
| Sse9I | AATT | 5 cut(s) | 98, 118, 153, 281, 535 |
| SsiI | CCGC | 2 cut(s) | 8, 301 |
| SspMI | CTAG | 3 cut(s) | 93, 489, 553 |
| SstI | GAGCTC | 1 cut(s) | 196 |
| StyD4I | CCNGG | 1 cut(s) | 319 |
| TaaI | ACNGT | 1 cut(s) | 409 |
| TaiI | ACGT | 1 cut(s) | 78 |
| TaqI | TCGA | 2 cut(s) | 37, 59 |
| TaqII | GACCGA | 1 cut(s) | 520 |
| TasI | AATT | 5 cut(s) | 98, 118, 153, 281, 535 |
| TfiI | GAWTC | 3 cut(s) | 470, 508, 547 |
| Tru1I | TTAA | 2 cut(s) | 165, 288 |
| Tru9I | TTAA | 2 cut(s) | 165, 288 |
| TseFI | GTSAC | 2 cut(s) | 393, 460 |
| TseI | GCWGC | 3 cut(s) | 64, 146, 476 |
| Tsp45I | GTSAC | 2 cut(s) | 393, 460 |
| TspDTI | ATGAA | 3 cut(s) | 440, 485, 529 |
| XbaI | TCTAGA | 1 cut(s) | 92 |
| XhoI | CTCGAG | 1 cut(s) | 36 |
| XspI | CTAG | 3 cut(s) | 93, 489, 553 |
| Zsp2I | ATGCAT | 1 cut(s) | 433 |