DNA RNA polymerases superfamily protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 103 |
| AcsI | RAATTY | 1 cut(s) | 425 |
| AgsI | TTSAA | 1 cut(s) | 425 |
| AluBI | AGCT | 2 cut(s) | 248, 396 |
| AluI | AGCT | 2 cut(s) | 248, 396 |
| Alw26I | GTCTC | 1 cut(s) | 358 |
| Aor13HI | TCCGGA | 1 cut(s) | 103 |
| ApeKI | GCWGC | 1 cut(s) | 17 |
| ApoI | RAATTY | 1 cut(s) | 425 |
| AspS9I | GGNCC | 2 cut(s) | 270, 314 |
| AsuHPI | GGTGA | 1 cut(s) | 364 |
| AvaII | GGWCC | 2 cut(s) | 270, 314 |
| BbvI | GCAGC | 1 cut(s) | 29 |
| BccI | CCATC | 2 cut(s) | 184, 367 |
| BceAI | ACGGC | 1 cut(s) | 58 |
| BclI | TGATCA | 1 cut(s) | 354 |
| BcoDI | GTCTC | 1 cut(s) | 358 |
| BisI | GCNGC | 1 cut(s) | 18 |
| BlsI | GCNGC | 1 cut(s) | 19 |
| Bme18I | GGWCC | 2 cut(s) | 270, 314 |
| BmgT120I | GGNCC | 2 cut(s) | 270, 314 |
| BmiI | GGNNCC | 2 cut(s) | 237, 272 |
| BmsI | GCATC | 2 cut(s) | 23, 427 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 351, 383 |
| BpuEI | CTTGAG | 1 cut(s) | 353 |
| BsaJI | CCNNGG | 1 cut(s) | 129 |
| BsaWI | WCCGGW | 1 cut(s) | 103 |
| BseAI | TCCGGA | 1 cut(s) | 103 |
| BseDI | CCNNGG | 1 cut(s) | 129 |
| BseGI | GGATG | 1 cut(s) | 292 |
| BseMII | CTCAG | 1 cut(s) | 309 |
| BseXI | GCAGC | 1 cut(s) | 29 |
| BsiSI | CCGG | 1 cut(s) | 104 |
| BsmAI | GTCTC | 1 cut(s) | 358 |
| Bsp13I | TCCGGA | 1 cut(s) | 103 |
| Bsp143I | GATC | 2 cut(s) | 330, 354 |
| Bsp19I | CCATGG | 1 cut(s) | 129 |
| BspCNI | CTCAG | 1 cut(s) | 310 |
| BspEI | TCCGGA | 1 cut(s) | 103 |
| BspLI | GGNNCC | 2 cut(s) | 237, 272 |
| BspQI | GCTCTTC | 1 cut(s) | 386 |
| BssECI | CCNNGG | 1 cut(s) | 129 |
| BssMI | GATC | 2 cut(s) | 330, 354 |
| BssT1I | CCWWGG | 1 cut(s) | 129 |
| Bst4CI | ACNGT | 1 cut(s) | 212 |
| Bst6I | CTCTTC | 1 cut(s) | 386 |
| BstC8I | GCNNGC | 1 cut(s) | 47 |
| BstDEI | CTNAG | 1 cut(s) | 318 |
| BstDSI | CCRYGG | 1 cut(s) | 129 |
| BstF5I | GGATG | 1 cut(s) | 292 |
| BstKTI | GATC | 2 cut(s) | 333, 357 |
| BstMAI | GTCTC | 1 cut(s) | 358 |
| BstMBI | GATC | 2 cut(s) | 330, 354 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 42 |
| BstV1I | GCAGC | 1 cut(s) | 29 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 282 |
| BtgI | CCRYGG | 1 cut(s) | 129 |
| BtsCI | GGATG | 1 cut(s) | 292 |
| Cac8I | GCNNGC | 1 cut(s) | 47 |
| Cfr13I | GGNCC | 2 cut(s) | 270, 314 |
| CviAII | CATG | 1 cut(s) | 130 |
| CviJI | RGCY | 8 cut(s) | 20, 73, 143, 185, 236, 248, 377, 396 |
| CviKI_1 | RGCY | 8 cut(s) | 20, 73, 143, 185, 236, 248, 377, 396 |
| DdeI | CTNAG | 1 cut(s) | 318 |
| DpnI | GATC | 2 cut(s) | 332, 356 |
| DpnII | GATC | 2 cut(s) | 330, 354 |
| DraI | TTTAAA | 1 cut(s) | 160 |
| Eam1104I | CTCTTC | 1 cut(s) | 386 |
| EarI | CTCTTC | 1 cut(s) | 386 |
| Eco130I | CCWWGG | 1 cut(s) | 129 |
| Eco47I | GGWCC | 2 cut(s) | 270, 314 |
| EcoO109I | RGGNCCY | 1 cut(s) | 270 |
| EcoT14I | CCWWGG | 1 cut(s) | 129 |
| ErhI | CCWWGG | 1 cut(s) | 129 |
| FaeI | CATG | 1 cut(s) | 133 |
| FaiI | YATR | 9 cut(s) | 43, 131, 140, 202, 204, 233, 253, 255, 280 |
| FatI | CATG | 1 cut(s) | 129 |
| FbaI | TGATCA | 1 cut(s) | 354 |
| Fnu4HI | GCNGC | 1 cut(s) | 18 |
| FokI | GGATG | 1 cut(s) | 299 |
| Fsp4HI | GCNGC | 1 cut(s) | 18 |
| GluI | GCNGC | 1 cut(s) | 18 |
| HapII | CCGG | 1 cut(s) | 104 |
| Hin1II | CATG | 1 cut(s) | 133 |
| HindIII | AAGCTT | 1 cut(s) | 246 |
| HinfI | GANTC | 1 cut(s) | 366 |
| HpaII | CCGG | 1 cut(s) | 104 |
| HphI | GGTGA | 1 cut(s) | 364 |
| Hpy188I | TCNGA | 1 cut(s) | 359 |
| Hpy188III | TCNNGA | 4 cut(s) | 104, 317, 370, 422 |
| HpyCH4III | ACNGT | 1 cut(s) | 212 |
| HpyCH4V | TGCA | 2 cut(s) | 17, 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 42 |
| HpyF3I | CTNAG | 1 cut(s) | 318 |
| Hsp92II | CATG | 1 cut(s) | 133 |
| Kpn2I | TCCGGA | 1 cut(s) | 103 |
| Ksp22I | TGATCA | 1 cut(s) | 354 |
| Kzo9I | GATC | 2 cut(s) | 330, 354 |
| LguI | GCTCTTC | 1 cut(s) | 386 |
| LmnI | GCTCC | 1 cut(s) | 241 |
| LpnPI | CCDG | 5 cut(s) | 59, 63, 117, 330, 397 |
| Lsp1109I | GCAGC | 1 cut(s) | 29 |
| LweI | GCATC | 2 cut(s) | 23, 427 |
| MaeIII | GTNAC | 2 cut(s) | 84, 212 |
| MalI | GATC | 2 cut(s) | 332, 356 |
| MboI | GATC | 2 cut(s) | 330, 354 |
| MboII | GAAGA | 1 cut(s) | 403 |
| MluCI | AATT | 4 cut(s) | 12, 99, 155, 425 |
| MlyI | GAGTC | 1 cut(s) | 360 |
| MroI | TCCGGA | 1 cut(s) | 103 |
| MseI | TTAA | 3 cut(s) | 159, 348, 430 |
| MspI | CCGG | 1 cut(s) | 104 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 42 |
| NcoI | CCATGG | 1 cut(s) | 129 |
| NdeII | GATC | 2 cut(s) | 330, 354 |
| NlaIII | CATG | 1 cut(s) | 133 |
| NlaIV | GGNNCC | 2 cut(s) | 237, 272 |
| PciSI | GCTCTTC | 1 cut(s) | 386 |
| PkrI | GCNGC | 1 cut(s) | 19 |
| PleI | GAGTC | 1 cut(s) | 360 |
| PpsI | GAGTC | 1 cut(s) | 360 |
| PpuMI | RGGWCCY | 1 cut(s) | 270 |
| Psp5II | RGGWCCY | 1 cut(s) | 270 |
| PspN4I | GGNNCC | 2 cut(s) | 237, 272 |
| PspPI | GGNCC | 2 cut(s) | 270, 314 |
| PspPPI | RGGWCCY | 1 cut(s) | 270 |
| SapI | GCTCTTC | 1 cut(s) | 386 |
| SaqAI | TTAA | 3 cut(s) | 159, 348, 430 |
| SatI | GCNGC | 1 cut(s) | 18 |
| Sau3AI | GATC | 2 cut(s) | 330, 354 |
| Sau96I | GGNCC | 2 cut(s) | 270, 314 |
| SchI | GAGTC | 1 cut(s) | 360 |
| SetI | ASST | 5 cut(s) | 82, 94, 250, 354, 398 |
| SfaNI | GCATC | 2 cut(s) | 23, 427 |
| SinI | GGWCC | 2 cut(s) | 270, 314 |
| SmlI | CTYRAG | 1 cut(s) | 368 |
| SmoI | CTYRAG | 1 cut(s) | 368 |
| Sse9I | AATT | 4 cut(s) | 12, 99, 155, 425 |
| SspI | AATATT | 1 cut(s) | 122 |
| StyI | CCWWGG | 1 cut(s) | 129 |
| TaaI | ACNGT | 1 cut(s) | 212 |
| TaqI | TCGA | 1 cut(s) | 221 |
| TasI | AATT | 4 cut(s) | 12, 99, 155, 425 |
| Tru1I | TTAA | 3 cut(s) | 159, 348, 430 |
| Tru9I | TTAA | 3 cut(s) | 159, 348, 430 |
| TseI | GCWGC | 1 cut(s) | 17 |
| TspDTI | ATGAA | 2 cut(s) | 17, 303 |
| VpaK11BI | GGWCC | 2 cut(s) | 270, 314 |
| XapI | RAATTY | 1 cut(s) | 425 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 105, 136, 224 |