transposition, RNA-mediated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SH3_Tf2-1 | PF24626 | 237 - 270 | 3e-13 | Tf2-1-like, SH3 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 570 |
| AccBSI | CCGCTC | 1 cut(s) | 721 |
| AciI | CCGC | 2 cut(s) | 452, 721 |
| AcsI | RAATTY | 3 cut(s) | 71, 240, 862 |
| AdeI | CACNNNGTG | 1 cut(s) | 967 |
| AfaI | GTAC | 7 cut(s) | 126, 249, 439, 637, 693, 774, 809 |
| AflIII | ACRYGT | 1 cut(s) | 498 |
| AgeI | ACCGGT | 1 cut(s) | 883 |
| AgsI | TTSAA | 2 cut(s) | 387, 526 |
| AjnI | CCWGG | 1 cut(s) | 316 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 831, 863 |
| AluBI | AGCT | 9 cut(s) | 41, 93, 139, 152, 188, 221, 403, 509, 977 |
| AluI | AGCT | 9 cut(s) | 41, 93, 139, 152, 188, 221, 403, 509, 977 |
| Alw26I | GTCTC | 3 cut(s) | 432, 754, 796 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 490 |
| AoxI | GGCC | 1 cut(s) | 104 |
| ApeKI | GCWGC | 1 cut(s) | 77 |
| ApoI | RAATTY | 3 cut(s) | 71, 240, 862 |
| AsiGI | ACCGGT | 1 cut(s) | 883 |
| AspS9I | GGNCC | 2 cut(s) | 477, 680 |
| AsuC2I | CCSGG | 1 cut(s) | 14 |
| AsuHPI | GGTGA | 1 cut(s) | 1010 |
| AvaII | GGWCC | 2 cut(s) | 477, 680 |
| BaeGI | GKGCMC | 1 cut(s) | 422 |
| BbsI | GAAGAC | 1 cut(s) | 501 |
| BbvI | GCAGC | 1 cut(s) | 89 |
| BccI | CCATC | 3 cut(s) | 209, 400, 455 |
| BciT130I | CCWGG | 1 cut(s) | 318 |
| BciVI | GTATCC | 1 cut(s) | 1023 |
| BcnI | CCSGG | 1 cut(s) | 14 |
| BcoDI | GTCTC | 3 cut(s) | 432, 754, 796 |
| BfaI | CTAG | 4 cut(s) | 189, 281, 768, 1030 |
| BfmI | CTRYAG | 1 cut(s) | 42 |
| BfuI | GTATCC | 1 cut(s) | 1023 |
| BisI | GCNGC | 1 cut(s) | 78 |
| BlsI | GCNGC | 1 cut(s) | 79 |
| BmcAI | AGTACT | 1 cut(s) | 439 |
| Bme1390I | CCNGG | 2 cut(s) | 14, 318 |
| Bme18I | GGWCC | 2 cut(s) | 477, 680 |
| BmgT120I | GGNCC | 2 cut(s) | 477, 680 |
| BmiI | GGNNCC | 4 cut(s) | 18, 325, 603, 987 |
| BmrFI | CCNGG | 2 cut(s) | 14, 318 |
| BmsI | GCATC | 1 cut(s) | 322 |
| BpiI | GAAGAC | 1 cut(s) | 501 |
| BpmI | CTGGAG | 1 cut(s) | 571 |
| BpuMI | CCSGG | 1 cut(s) | 14 |
| BsaJI | CCNNGG | 1 cut(s) | 936 |
| BsaWI | WCCGGW | 1 cut(s) | 883 |
| Bse118I | RCCGGY | 1 cut(s) | 883 |
| Bse1I | ACTGG | 1 cut(s) | 495 |
| Bse3DI | GCAATG | 1 cut(s) | 810 |
| BseBI | CCWGG | 1 cut(s) | 318 |
| BseDI | CCNNGG | 1 cut(s) | 936 |
| BseGI | GGATG | 4 cut(s) | 220, 265, 313, 448 |
| BseMI | GCAATG | 1 cut(s) | 810 |
| BseMII | CTCAG | 3 cut(s) | 437, 443, 931 |
| BseNI | ACTGG | 1 cut(s) | 495 |
| BseRI | GAGGAG | 2 cut(s) | 299, 1007 |
| BseSI | GKGCMC | 1 cut(s) | 422 |
| BseXI | GCAGC | 1 cut(s) | 89 |
| BsgI | GTGCAG | 1 cut(s) | 750 |
| BshFI | GGCC | 1 cut(s) | 106 |
| BshTI | ACCGGT | 1 cut(s) | 883 |
| BsiSI | CCGG | 2 cut(s) | 13, 884 |
| BslFI | GGGAC | 1 cut(s) | 76 |
| BsmAI | GTCTC | 3 cut(s) | 432, 754, 796 |
| BsmFI | GGGAC | 1 cut(s) | 76 |
| BsnI | GGCC | 1 cut(s) | 106 |
| Bsp1286I | GDGCHC | 1 cut(s) | 422 |
| Bsp143I | GATC | 3 cut(s) | 262, 364, 711 |
| BspACI | CCGC | 2 cut(s) | 452, 721 |
| BspANI | GGCC | 1 cut(s) | 106 |
| BspCNI | CTCAG | 3 cut(s) | 436, 442, 930 |
| BspLI | GGNNCC | 4 cut(s) | 18, 325, 603, 987 |
| BsrBI | CCGCTC | 1 cut(s) | 721 |
| BsrDI | GCAATG | 1 cut(s) | 810 |
| BsrFI | RCCGGY | 1 cut(s) | 883 |
| BsrI | ACTGG | 1 cut(s) | 495 |
| BssAI | RCCGGY | 1 cut(s) | 883 |
| BssECI | CCNNGG | 1 cut(s) | 936 |
| BssMI | GATC | 3 cut(s) | 262, 364, 711 |
| BssT1I | CCWWGG | 1 cut(s) | 936 |
| Bst2UI | CCWGG | 1 cut(s) | 318 |
| Bst4CI | ACNGT | 3 cut(s) | 10, 578, 630 |
| BstC8I | GCNNGC | 1 cut(s) | 91 |
| BstDEI | CTNAG | 3 cut(s) | 423, 429, 917 |
| BstF5I | GGATG | 4 cut(s) | 220, 265, 313, 448 |
| BstKTI | GATC | 3 cut(s) | 265, 367, 714 |
| BstMAI | GTCTC | 3 cut(s) | 432, 754, 796 |
| BstMBI | GATC | 3 cut(s) | 262, 364, 711 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 86 |
| BstNI | CCWGG | 1 cut(s) | 318 |
| BstNSI | RCATGY | 1 cut(s) | 502 |
| BstSCI | CCNGG | 2 cut(s) | 12, 316 |
| BstSFI | CTRYAG | 1 cut(s) | 42 |
| BstSLI | GKGCMC | 1 cut(s) | 422 |
| BstV1I | GCAGC | 1 cut(s) | 89 |
| BstV2I | GAAGAC | 1 cut(s) | 501 |
| BsuI | GTATCC | 1 cut(s) | 1023 |
| BsuRI | GGCC | 1 cut(s) | 106 |
| BtsCI | GGATG | 4 cut(s) | 220, 265, 313, 448 |
| BtsIMutI | CAGTG | 2 cut(s) | 488, 635 |
| Cac8I | GCNNGC | 1 cut(s) | 91 |
| CaiI | CAGNNNCTG | 1 cut(s) | 490 |
| Cfr10I | RCCGGY | 1 cut(s) | 883 |
| Cfr13I | GGNCC | 2 cut(s) | 477, 680 |
| Csp6I | GTAC | 7 cut(s) | 125, 248, 438, 636, 692, 773, 808 |
| CspAI | ACCGGT | 1 cut(s) | 883 |
| CviQI | GTAC | 7 cut(s) | 125, 248, 438, 636, 692, 773, 808 |
| DdeI | CTNAG | 3 cut(s) | 423, 429, 917 |
| DpnI | GATC | 3 cut(s) | 264, 366, 713 |
| DpnII | GATC | 3 cut(s) | 262, 364, 711 |
| DraIII | CACNNNGTG | 1 cut(s) | 967 |
| Eco130I | CCWWGG | 1 cut(s) | 936 |
| Eco47I | GGWCC | 2 cut(s) | 477, 680 |
| EcoRII | CCWGG | 1 cut(s) | 316 |
| EcoT14I | CCWWGG | 1 cut(s) | 936 |
| EcoT22I | ATGCAT | 1 cut(s) | 315 |
| ErhI | CCWWGG | 1 cut(s) | 936 |
| FaqI | GGGAC | 1 cut(s) | 76 |
| FauNDI | CATATG | 1 cut(s) | 871 |
| Fnu4HI | GCNGC | 1 cut(s) | 78 |
| FokI | GGATG | 4 cut(s) | 227, 272, 300, 435 |
| Fsp4HI | GCNGC | 1 cut(s) | 78 |
| FspBI | CTAG | 4 cut(s) | 189, 281, 768, 1030 |
| GluI | GCNGC | 1 cut(s) | 78 |
| GsuI | CTGGAG | 1 cut(s) | 571 |
| HaeIII | GGCC | 1 cut(s) | 106 |
| HapII | CCGG | 2 cut(s) | 13, 884 |
| HinfI | GANTC | 1 cut(s) | 818 |
| HpaII | CCGG | 2 cut(s) | 13, 884 |
| HphI | GGTGA | 1 cut(s) | 1010 |
| Hpy166II | GTNNAC | 1 cut(s) | 248 |
| Hpy188I | TCNGA | 6 cut(s) | 364, 486, 759, 851, 891, 920 |
| Hpy188III | TCNNGA | 3 cut(s) | 368, 683, 768 |
| Hpy8I | GTNNAC | 1 cut(s) | 248 |
| HpyAV | CCTTC | 1 cut(s) | 53 |
| HpyCH4III | ACNGT | 3 cut(s) | 10, 578, 630 |
| HpyCH4V | TGCA | 4 cut(s) | 77, 313, 443, 731 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 86 |
| HpyF3I | CTNAG | 3 cut(s) | 423, 429, 917 |
| Kzo9I | GATC | 3 cut(s) | 262, 364, 711 |
| LmnI | GCTCC | 6 cut(s) | 185, 218, 607, 718, 907, 994 |
| Lsp1109I | GCAGC | 1 cut(s) | 89 |
| LweI | GCATC | 1 cut(s) | 322 |
| MaeI | CTAG | 4 cut(s) | 189, 281, 768, 1030 |
| MaeIII | GTNAC | 2 cut(s) | 368, 697 |
| MalI | GATC | 3 cut(s) | 264, 366, 713 |
| MbiI | CCGCTC | 1 cut(s) | 721 |
| MboI | GATC | 3 cut(s) | 262, 364, 711 |
| MboII | GAAGA | 3 cut(s) | 206, 506, 887 |
| MhlI | GDGCHC | 1 cut(s) | 422 |
| MluCI | AATT | 7 cut(s) | 32, 71, 240, 521, 532, 686, 862 |
| MmeI | TCCRAC | 1 cut(s) | 629 |
| Mph1103I | ATGCAT | 1 cut(s) | 315 |
| MseI | TTAA | 2 cut(s) | 83, 267 |
| MslI | CAYNNNNRTG | 2 cut(s) | 318, 596 |
| MspI | CCGG | 2 cut(s) | 13, 884 |
| MspR9I | CCNGG | 2 cut(s) | 14, 318 |
| MvaI | CCWGG | 1 cut(s) | 318 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 86 |
| NciI | CCSGG | 1 cut(s) | 14 |
| NdeI | CATATG | 1 cut(s) | 871 |
| NdeII | GATC | 3 cut(s) | 262, 364, 711 |
| NlaIV | GGNNCC | 4 cut(s) | 18, 325, 603, 987 |
| NmuCI | GTSAC | 1 cut(s) | 368 |
| NsiI | ATGCAT | 1 cut(s) | 315 |
| NspI | RCATGY | 1 cut(s) | 502 |
| PciI | ACATGT | 1 cut(s) | 498 |
| PfeI | GAWTC | 1 cut(s) | 818 |
| PinAI | ACCGGT | 1 cut(s) | 883 |
| PkrI | GCNGC | 1 cut(s) | 79 |
| PscI | ACATGT | 1 cut(s) | 498 |
| PsiI | TTATAA | 1 cut(s) | 570 |
| Psp6I | CCWGG | 1 cut(s) | 316 |
| PspGI | CCWGG | 1 cut(s) | 316 |
| PspN4I | GGNNCC | 4 cut(s) | 18, 325, 603, 987 |
| PspPI | GGNCC | 2 cut(s) | 477, 680 |
| PstNI | CAGNNNCTG | 1 cut(s) | 490 |
| RsaI | GTAC | 7 cut(s) | 126, 249, 439, 637, 693, 774, 809 |
| RsaNI | GTAC | 7 cut(s) | 125, 248, 438, 636, 692, 773, 808 |
| RseI | CAYNNNNRTG | 2 cut(s) | 318, 596 |
| SaqAI | TTAA | 2 cut(s) | 83, 267 |
| SatI | GCNGC | 1 cut(s) | 78 |
| Sau3AI | GATC | 3 cut(s) | 262, 364, 711 |
| Sau96I | GGNCC | 2 cut(s) | 477, 680 |
| ScaI | AGTACT | 1 cut(s) | 439 |
| ScrFI | CCNGG | 2 cut(s) | 14, 318 |
| SduI | GDGCHC | 1 cut(s) | 422 |
| SfaNI | GCATC | 1 cut(s) | 322 |
| SfcI | CTRYAG | 1 cut(s) | 42 |
| SinI | GGWCC | 2 cut(s) | 477, 680 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 318, 596 |
| Sse9I | AATT | 7 cut(s) | 32, 71, 240, 521, 532, 686, 862 |
| SsiI | CCGC | 2 cut(s) | 452, 721 |
| SspMI | CTAG | 4 cut(s) | 189, 281, 768, 1030 |
| StyD4I | CCNGG | 2 cut(s) | 12, 316 |
| StyI | CCWWGG | 1 cut(s) | 936 |
| TaaI | ACNGT | 3 cut(s) | 10, 578, 630 |
| TasI | AATT | 7 cut(s) | 32, 71, 240, 521, 532, 686, 862 |
| TatI | WGTACW | 3 cut(s) | 437, 772, 807 |
| TfiI | GAWTC | 1 cut(s) | 818 |
| Tru1I | TTAA | 2 cut(s) | 83, 267 |
| Tru9I | TTAA | 2 cut(s) | 83, 267 |
| TscAI | CASTG | 2 cut(s) | 495, 635 |
| TseFI | GTSAC | 1 cut(s) | 368 |
| TseI | GCWGC | 1 cut(s) | 77 |
| Tsp45I | GTSAC | 1 cut(s) | 368 |
| TspDTI | ATGAA | 9 cut(s) | 45, 84, 162, 190, 326, 437, 624, 776, 888 |
| TspGWI | ACGGA | 2 cut(s) | 485, 731 |
| TspRI | CASTG | 2 cut(s) | 495, 635 |
| VpaK11BI | GGWCC | 2 cut(s) | 477, 680 |
| XapI | RAATTY | 3 cut(s) | 71, 240, 862 |
| XbaI | TCTAGA | 1 cut(s) | 767 |
| XceI | RCATGY | 1 cut(s) | 502 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 487, 595 |
| XspI | CTAG | 4 cut(s) | 189, 281, 768, 1030 |
| ZrmI | AGTACT | 1 cut(s) | 439 |
| Zsp2I | ATGCAT | 1 cut(s) | 315 |