Zinc knuckle
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 34 |
| AcuI | CTGAAG | 1 cut(s) | 42 |
| AgsI | TTSAA | 2 cut(s) | 148, 196 |
| AleI | CACNNNNGTG | 1 cut(s) | 353 |
| AluBI | AGCT | 2 cut(s) | 151, 188 |
| AluI | AGCT | 2 cut(s) | 151, 188 |
| AsuHPI | GGTGA | 2 cut(s) | 38, 367 |
| BccI | CCATC | 1 cut(s) | 92 |
| BfaI | CTAG | 1 cut(s) | 119 |
| BisI | GCNGC | 1 cut(s) | 35 |
| BlsI | GCNGC | 1 cut(s) | 36 |
| BmiI | GGNNCC | 1 cut(s) | 18 |
| BsaJI | CCNNGG | 2 cut(s) | 126, 351 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 195, 225 |
| Bse3DI | GCAATG | 1 cut(s) | 91 |
| BseDI | CCNNGG | 2 cut(s) | 126, 351 |
| BseGI | GGATG | 2 cut(s) | 156, 166 |
| BseMI | GCAATG | 1 cut(s) | 91 |
| BseRI | GAGGAG | 1 cut(s) | 219 |
| Bsp19I | CCATGG | 1 cut(s) | 351 |
| BspACI | CCGC | 1 cut(s) | 34 |
| BspLI | GGNNCC | 1 cut(s) | 18 |
| BsrDI | GCAATG | 1 cut(s) | 91 |
| BssECI | CCNNGG | 2 cut(s) | 126, 351 |
| BssT1I | CCWWGG | 2 cut(s) | 126, 351 |
| Bst4CI | ACNGT | 1 cut(s) | 345 |
| BstDSI | CCRYGG | 1 cut(s) | 351 |
| BstF5I | GGATG | 2 cut(s) | 156, 166 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 133 |
| BtgI | CCRYGG | 1 cut(s) | 351 |
| BtsCI | GGATG | 2 cut(s) | 156, 166 |
| CviAII | CATG | 2 cut(s) | 71, 352 |
| CviJI | RGCY | 3 cut(s) | 79, 151, 188 |
| CviKI_1 | RGCY | 3 cut(s) | 79, 151, 188 |
| Eco130I | CCWWGG | 2 cut(s) | 126, 351 |
| Eco57I | CTGAAG | 1 cut(s) | 42 |
| EcoT14I | CCWWGG | 2 cut(s) | 126, 351 |
| ErhI | CCWWGG | 2 cut(s) | 126, 351 |
| FaeI | CATG | 2 cut(s) | 74, 355 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 49, 81 |
| FatI | CATG | 2 cut(s) | 70, 351 |
| Fnu4HI | GCNGC | 1 cut(s) | 35 |
| FokI | GGATG | 2 cut(s) | 143, 153 |
| Fsp4HI | GCNGC | 1 cut(s) | 35 |
| FspBI | CTAG | 1 cut(s) | 119 |
| GluI | GCNGC | 1 cut(s) | 35 |
| Hin1II | CATG | 2 cut(s) | 74, 355 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HinfI | GANTC | 2 cut(s) | 115, 389 |
| HpaI | GTTAAC | 1 cut(s) | 6 |
| HphI | GGTGA | 2 cut(s) | 38, 367 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 348 |
| Hpy188III | TCNNGA | 2 cut(s) | 20, 196 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 348 |
| HpyAV | CCTTC | 3 cut(s) | 17, 208, 311 |
| HpyCH4III | ACNGT | 1 cut(s) | 345 |
| HpyCH4V | TGCA | 1 cut(s) | 84 |
| Hsp92II | CATG | 2 cut(s) | 74, 355 |
| KspAI | GTTAAC | 1 cut(s) | 6 |
| LpnPI | CCDG | 1 cut(s) | 33 |
| MaeI | CTAG | 1 cut(s) | 119 |
| MaeIII | GTNAC | 2 cut(s) | 38, 217 |
| MboII | GAAGA | 1 cut(s) | 57 |
| MluCI | AATT | 1 cut(s) | 143 |
| MmeI | TCCRAC | 1 cut(s) | 184 |
| MnlI | CCTC | 2 cut(s) | 174, 197 |
| MseI | TTAA | 2 cut(s) | 5, 51 |
| MslI | CAYNNNNRTG | 1 cut(s) | 353 |
| NcoI | CCATGG | 1 cut(s) | 351 |
| NlaIII | CATG | 2 cut(s) | 74, 355 |
| NlaIV | GGNNCC | 1 cut(s) | 18 |
| OliI | CACNNNNGTG | 1 cut(s) | 353 |
| PfeI | GAWTC | 2 cut(s) | 115, 389 |
| PkrI | GCNGC | 1 cut(s) | 36 |
| PspN4I | GGNNCC | 1 cut(s) | 18 |
| RseI | CAYNNNNRTG | 1 cut(s) | 353 |
| SaqAI | TTAA | 2 cut(s) | 5, 51 |
| SatI | GCNGC | 1 cut(s) | 35 |
| SetI | ASST | 9 cut(s) | 18, 28, 62, 153, 166, 190, 219, 322, 398 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 353 |
| Sse9I | AATT | 1 cut(s) | 143 |
| SsiI | CCGC | 1 cut(s) | 34 |
| SspMI | CTAG | 1 cut(s) | 119 |
| StyI | CCWWGG | 2 cut(s) | 126, 351 |
| TaaI | ACNGT | 1 cut(s) | 345 |
| TaqI | TCGA | 2 cut(s) | 153, 263 |
| TasI | AATT | 1 cut(s) | 143 |
| TauI | GCSGC | 1 cut(s) | 37 |
| TfiI | GAWTC | 2 cut(s) | 115, 389 |
| Tru1I | TTAA | 2 cut(s) | 5, 51 |
| Tru9I | TTAA | 2 cut(s) | 5, 51 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 133 |
| XspI | CTAG | 1 cut(s) | 119 |