Retroviral aspartyl protease
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 29, 216 |
| AciI | CCGC | 1 cut(s) | 86 |
| AcsI | RAATTY | 1 cut(s) | 209 |
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AdeI | CACNNNGTG | 1 cut(s) | 665 |
| AfaI | GTAC | 2 cut(s) | 55, 187 |
| AflII | CTTAAG | 1 cut(s) | 191 |
| AgsI | TTSAA | 8 cut(s) | 169, 209, 259, 295, 316, 356, 396, 713 |
| AluBI | AGCT | 5 cut(s) | 34, 350, 374, 577, 646 |
| AluI | AGCT | 5 cut(s) | 34, 350, 374, 577, 646 |
| Alw26I | GTCTC | 1 cut(s) | 87 |
| AoxI | GGCC | 2 cut(s) | 400, 682 |
| ApeKI | GCWGC | 3 cut(s) | 406, 574, 646 |
| ApoI | RAATTY | 1 cut(s) | 209 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 109 |
| AspS9I | GGNCC | 1 cut(s) | 131 |
| AsuHPI | GGTGA | 1 cut(s) | 530 |
| AvaII | GGWCC | 1 cut(s) | 131 |
| BbvI | GCAGC | 3 cut(s) | 418, 586, 633 |
| BccI | CCATC | 1 cut(s) | 72 |
| BceAI | ACGGC | 1 cut(s) | 394 |
| BciVI | GTATCC | 1 cut(s) | 622 |
| BcoDI | GTCTC | 1 cut(s) | 87 |
| BfaI | CTAG | 3 cut(s) | 371, 455, 549 |
| BfmI | CTRYAG | 2 cut(s) | 404, 445 |
| BfrI | CTTAAG | 1 cut(s) | 191 |
| BfuI | GTATCC | 1 cut(s) | 622 |
| BisI | GCNGC | 3 cut(s) | 407, 575, 647 |
| BlpI | GCTNAGC | 1 cut(s) | 35 |
| BlsI | GCNGC | 3 cut(s) | 408, 576, 648 |
| Bme18I | GGWCC | 1 cut(s) | 131 |
| BmgT120I | GGNCC | 1 cut(s) | 131 |
| BmsI | GCATC | 2 cut(s) | 325, 440 |
| BpmI | CTGGAG | 1 cut(s) | 47 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 35 |
| BpuEI | CTTGAG | 1 cut(s) | 85 |
| BsaI | GGTCTC | 1 cut(s) | 87 |
| BsaJI | CCNNGG | 1 cut(s) | 685 |
| Bse1I | ACTGG | 1 cut(s) | 638 |
| Bse3DI | GCAATG | 1 cut(s) | 654 |
| BseDI | CCNNGG | 1 cut(s) | 685 |
| BseGI | GGATG | 1 cut(s) | 610 |
| BseMI | GCAATG | 1 cut(s) | 654 |
| BseMII | CTCAG | 2 cut(s) | 26, 129 |
| BseNI | ACTGG | 1 cut(s) | 638 |
| BseRI | GAGGAG | 3 cut(s) | 137, 551, 632 |
| BseXI | GCAGC | 3 cut(s) | 418, 586, 633 |
| BsgI | GTGCAG | 2 cut(s) | 136, 519 |
| BshFI | GGCC | 2 cut(s) | 402, 684 |
| BsmAI | GTCTC | 1 cut(s) | 87 |
| BsnI | GGCC | 2 cut(s) | 402, 684 |
| Bso31I | GGTCTC | 1 cut(s) | 87 |
| Bsp143I | GATC | 2 cut(s) | 378, 553 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 35 |
| Bsp19I | CCATGG | 1 cut(s) | 685 |
| BspACI | CCGC | 1 cut(s) | 86 |
| BspANI | GGCC | 2 cut(s) | 402, 684 |
| BspCNI | CTCAG | 2 cut(s) | 27, 130 |
| BspHI | TCATGA | 1 cut(s) | 331 |
| BspMAI | CTGCAG | 1 cut(s) | 408 |
| BspTI | CTTAAG | 1 cut(s) | 191 |
| BspTNI | GGTCTC | 1 cut(s) | 87 |
| BsrDI | GCAATG | 1 cut(s) | 654 |
| BsrI | ACTGG | 1 cut(s) | 638 |
| BssECI | CCNNGG | 1 cut(s) | 685 |
| BssMI | GATC | 2 cut(s) | 378, 553 |
| BssT1I | CCWWGG | 1 cut(s) | 685 |
| Bst4CI | ACNGT | 1 cut(s) | 312 |
| Bst6I | CTCTTC | 1 cut(s) | 594 |
| BstAFI | CTTAAG | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 1 cut(s) | 404 |
| BstDEI | CTNAG | 5 cut(s) | 35, 138, 320, 483, 662 |
| BstDSI | CCRYGG | 1 cut(s) | 685 |
| BstF5I | GGATG | 1 cut(s) | 610 |
| BstKTI | GATC | 2 cut(s) | 381, 556 |
| BstMAI | GTCTC | 1 cut(s) | 87 |
| BstMBI | GATC | 2 cut(s) | 378, 553 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 459, 690 |
| BstSFI | CTRYAG | 2 cut(s) | 404, 445 |
| BstV1I | GCAGC | 3 cut(s) | 418, 586, 633 |
| BsuI | GTATCC | 1 cut(s) | 622 |
| BsuRI | GGCC | 2 cut(s) | 402, 684 |
| BtgI | CCRYGG | 1 cut(s) | 685 |
| BtgZI | GCGATG | 1 cut(s) | 20 |
| BtsCI | GGATG | 1 cut(s) | 610 |
| BtsIMutI | CAGTG | 1 cut(s) | 153 |
| Cac8I | GCNNGC | 1 cut(s) | 404 |
| CciI | TCATGA | 1 cut(s) | 331 |
| Cfr13I | GGNCC | 1 cut(s) | 131 |
| Csp6I | GTAC | 2 cut(s) | 54, 186 |
| CviAII | CATG | 3 cut(s) | 20, 332, 686 |
| CviJI | RGCY | 9 cut(s) | 34, 161, 350, 374, 402, 409, 577, 646, 684 |
| CviKI_1 | RGCY | 9 cut(s) | 34, 161, 350, 374, 402, 409, 577, 646, 684 |
| CviQI | GTAC | 2 cut(s) | 54, 186 |
| DdeI | CTNAG | 5 cut(s) | 35, 138, 320, 483, 662 |
| DpnI | GATC | 2 cut(s) | 380, 555 |
| DpnII | GATC | 2 cut(s) | 378, 553 |
| DraIII | CACNNNGTG | 1 cut(s) | 665 |
| Eam1104I | CTCTTC | 1 cut(s) | 594 |
| EarI | CTCTTC | 1 cut(s) | 594 |
| EciI | GGCGGA | 1 cut(s) | 75 |
| Eco130I | CCWWGG | 1 cut(s) | 685 |
| Eco147I | AGGCCT | 1 cut(s) | 402 |
| Eco31I | GGTCTC | 1 cut(s) | 87 |
| Eco47I | GGWCC | 1 cut(s) | 131 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| EcoT14I | CCWWGG | 1 cut(s) | 685 |
| ErhI | CCWWGG | 1 cut(s) | 685 |
| FaeI | CATG | 3 cut(s) | 23, 335, 689 |
| FatI | CATG | 3 cut(s) | 19, 331, 685 |
| Fnu4HI | GCNGC | 3 cut(s) | 407, 575, 647 |
| FokI | GGATG | 1 cut(s) | 617 |
| Fsp4HI | GCNGC | 3 cut(s) | 407, 575, 647 |
| FspBI | CTAG | 3 cut(s) | 371, 455, 549 |
| GluI | GCNGC | 3 cut(s) | 407, 575, 647 |
| GsuI | CTGGAG | 1 cut(s) | 47 |
| HaeIII | GGCC | 2 cut(s) | 402, 684 |
| Hin1II | CATG | 3 cut(s) | 23, 335, 689 |
| HinfI | GANTC | 1 cut(s) | 709 |
| HphI | GGTGA | 1 cut(s) | 530 |
| Hpy188I | TCNGA | 2 cut(s) | 139, 378 |
| Hpy188III | TCNNGA | 4 cut(s) | 64, 102, 332, 713 |
| HpyAV | CCTTC | 1 cut(s) | 144 |
| HpyCH4III | ACNGT | 1 cut(s) | 312 |
| HpyCH4V | TGCA | 7 cut(s) | 153, 338, 406, 475, 500, 649, 659 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 459, 690 |
| HpyF3I | CTNAG | 5 cut(s) | 35, 138, 320, 483, 662 |
| Hsp92II | CATG | 3 cut(s) | 23, 335, 689 |
| Kzo9I | GATC | 2 cut(s) | 378, 553 |
| LpnPI | CCDG | 3 cut(s) | 77, 416, 651 |
| Lsp1109I | GCAGC | 3 cut(s) | 418, 586, 633 |
| LweI | GCATC | 2 cut(s) | 325, 440 |
| MaeI | CTAG | 3 cut(s) | 371, 455, 549 |
| MalI | GATC | 2 cut(s) | 380, 555 |
| MboI | GATC | 2 cut(s) | 378, 553 |
| MboII | GAAGA | 3 cut(s) | 87, 271, 611 |
| MluCI | AATT | 6 cut(s) | 209, 290, 356, 465, 633, 699 |
| MroXI | GAANNNNTTC | 1 cut(s) | 109 |
| MseI | TTAA | 3 cut(s) | 192, 281, 416 |
| MslI | CAYNNNNRTG | 1 cut(s) | 561 |
| MspCI | CTTAAG | 1 cut(s) | 191 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 459, 690 |
| NcoI | CCATGG | 1 cut(s) | 685 |
| NdeII | GATC | 2 cut(s) | 378, 553 |
| NlaIII | CATG | 3 cut(s) | 23, 335, 689 |
| PagI | TCATGA | 1 cut(s) | 331 |
| PceI | AGGCCT | 1 cut(s) | 402 |
| PdmI | GAANNNNTTC | 1 cut(s) | 109 |
| PfeI | GAWTC | 1 cut(s) | 709 |
| PkrI | GCNGC | 3 cut(s) | 408, 576, 648 |
| PsiI | TTATAA | 2 cut(s) | 29, 216 |
| PspPI | GGNCC | 1 cut(s) | 131 |
| PstI | CTGCAG | 1 cut(s) | 408 |
| RsaI | GTAC | 2 cut(s) | 55, 187 |
| RsaNI | GTAC | 2 cut(s) | 54, 186 |
| RseI | CAYNNNNRTG | 1 cut(s) | 561 |
| SaqAI | TTAA | 3 cut(s) | 192, 281, 416 |
| SatI | GCNGC | 3 cut(s) | 407, 575, 647 |
| Sau3AI | GATC | 2 cut(s) | 378, 553 |
| Sau96I | GGNCC | 1 cut(s) | 131 |
| SetI | ASST | 9 cut(s) | 14, 36, 187, 352, 376, 393, 423, 579, 648 |
| SfaNI | GCATC | 2 cut(s) | 325, 440 |
| SfcI | CTRYAG | 2 cut(s) | 404, 445 |
| SinI | GGWCC | 1 cut(s) | 131 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 561 |
| SmlI | CTYRAG | 2 cut(s) | 100, 191 |
| SmoI | CTYRAG | 2 cut(s) | 100, 191 |
| Sse9I | AATT | 6 cut(s) | 209, 290, 356, 465, 633, 699 |
| SseBI | AGGCCT | 1 cut(s) | 402 |
| SsiI | CCGC | 1 cut(s) | 86 |
| SspMI | CTAG | 3 cut(s) | 371, 455, 549 |
| StuI | AGGCCT | 1 cut(s) | 402 |
| StyI | CCWWGG | 1 cut(s) | 685 |
| TaaI | ACNGT | 1 cut(s) | 312 |
| TaqI | TCGA | 3 cut(s) | 342, 360, 423 |
| TasI | AATT | 6 cut(s) | 209, 290, 356, 465, 633, 699 |
| TfiI | GAWTC | 1 cut(s) | 709 |
| Tru1I | TTAA | 3 cut(s) | 192, 281, 416 |
| Tru9I | TTAA | 3 cut(s) | 192, 281, 416 |
| TscAI | CASTG | 1 cut(s) | 160 |
| TseI | GCWGC | 3 cut(s) | 406, 574, 646 |
| TspDTI | ATGAA | 4 cut(s) | 85, 320, 621, 693 |
| TspGWI | ACGGA | 1 cut(s) | 103 |
| TspRI | CASTG | 1 cut(s) | 160 |
| Vha464I | CTTAAG | 1 cut(s) | 191 |
| VpaK11BI | GGWCC | 1 cut(s) | 131 |
| XapI | RAATTY | 1 cut(s) | 209 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 683 |
| XmnI | GAANNNNTTC | 1 cut(s) | 109 |
| XspI | CTAG | 3 cut(s) | 371, 455, 549 |