DNA RNA polymerases superfamily protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 144 |
| AccIII | TCCGGA | 1 cut(s) | 103 |
| AciI | CCGC | 1 cut(s) | 59 |
| AclWI | GGATC | 1 cut(s) | 126 |
| AcsI | RAATTY | 1 cut(s) | 449 |
| AcuI | CTGAAG | 1 cut(s) | 497 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 306, 494 |
| AgsI | TTSAA | 4 cut(s) | 246, 353, 449, 455 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 441, 473 |
| AluBI | AGCT | 2 cut(s) | 272, 420 |
| AluI | AGCT | 2 cut(s) | 272, 420 |
| AlwI | GGATC | 1 cut(s) | 126 |
| Aor13HI | TCCGGA | 1 cut(s) | 103 |
| AoxI | GGCC | 1 cut(s) | 207 |
| ApoI | RAATTY | 1 cut(s) | 449 |
| AspS9I | GGNCC | 2 cut(s) | 294, 338 |
| AsuHPI | GGTGA | 3 cut(s) | 118, 388, 473 |
| AvaII | GGWCC | 2 cut(s) | 294, 338 |
| BccI | CCATC | 1 cut(s) | 208 |
| BceAI | ACGGC | 1 cut(s) | 414 |
| BclI | TGATCA | 1 cut(s) | 378 |
| Bme18I | GGWCC | 2 cut(s) | 294, 338 |
| BmgT120I | GGNCC | 2 cut(s) | 294, 338 |
| BmiI | GGNNCC | 2 cut(s) | 261, 296 |
| BmsI | GCATC | 1 cut(s) | 451 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 375, 407 |
| BpuEI | CTTGAG | 1 cut(s) | 377 |
| BsaJI | CCNNGG | 2 cut(s) | 129, 488 |
| BsaWI | WCCGGW | 1 cut(s) | 103 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 306, 494 |
| BseAI | TCCGGA | 1 cut(s) | 103 |
| BseDI | CCNNGG | 2 cut(s) | 129, 488 |
| BseGI | GGATG | 1 cut(s) | 316 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 306, 494 |
| BshFI | GGCC | 1 cut(s) | 209 |
| BsiSI | CCGG | 1 cut(s) | 104 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 306, 494 |
| BsnI | GGCC | 1 cut(s) | 209 |
| Bsp13I | TCCGGA | 1 cut(s) | 103 |
| Bsp143I | GATC | 3 cut(s) | 118, 345, 378 |
| Bsp19I | CCATGG | 1 cut(s) | 129 |
| BspACI | CCGC | 1 cut(s) | 59 |
| BspANI | GGCC | 1 cut(s) | 209 |
| BspEI | TCCGGA | 1 cut(s) | 103 |
| BspLI | GGNNCC | 2 cut(s) | 261, 296 |
| BspPI | GGATC | 1 cut(s) | 126 |
| BspQI | GCTCTTC | 1 cut(s) | 410 |
| BssECI | CCNNGG | 2 cut(s) | 129, 488 |
| BssMI | GATC | 3 cut(s) | 118, 345, 378 |
| BssT1I | CCWWGG | 2 cut(s) | 129, 488 |
| Bst4CI | ACNGT | 2 cut(s) | 75, 288 |
| Bst6I | CTCTTC | 1 cut(s) | 410 |
| BstC8I | GCNNGC | 1 cut(s) | 47 |
| BstDSI | CCRYGG | 1 cut(s) | 129 |
| BstF5I | GGATG | 1 cut(s) | 316 |
| BstKTI | GATC | 3 cut(s) | 121, 348, 381 |
| BstMBI | GATC | 3 cut(s) | 118, 345, 378 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 42 |
| BsuRI | GGCC | 1 cut(s) | 209 |
| BtgI | CCRYGG | 1 cut(s) | 129 |
| BtsCI | GGATG | 1 cut(s) | 316 |
| BtsIMutI | CAGTG | 1 cut(s) | 293 |
| Cac8I | GCNNGC | 1 cut(s) | 47 |
| Cfr13I | GGNCC | 2 cut(s) | 294, 338 |
| CviAII | CATG | 1 cut(s) | 130 |
| CviJI | RGCY | 6 cut(s) | 167, 209, 260, 272, 401, 420 |
| CviKI_1 | RGCY | 6 cut(s) | 167, 209, 260, 272, 401, 420 |
| DpnI | GATC | 3 cut(s) | 120, 347, 380 |
| DpnII | GATC | 3 cut(s) | 118, 345, 378 |
| DraI | TTTAAA | 1 cut(s) | 184 |
| Eam1104I | CTCTTC | 1 cut(s) | 410 |
| EarI | CTCTTC | 1 cut(s) | 410 |
| Eco130I | CCWWGG | 2 cut(s) | 129, 488 |
| Eco47I | GGWCC | 2 cut(s) | 294, 338 |
| Eco57I | CTGAAG | 1 cut(s) | 497 |
| EcoO109I | RGGNCCY | 1 cut(s) | 294 |
| EcoT14I | CCWWGG | 2 cut(s) | 129, 488 |
| ErhI | CCWWGG | 2 cut(s) | 129, 488 |
| FaeI | CATG | 1 cut(s) | 133 |
| FaiI | YATR | 8 cut(s) | 131, 144, 156, 158, 226, 228, 257, 279 |
| FatI | CATG | 1 cut(s) | 129 |
| FauNDI | CATATG | 1 cut(s) | 156 |
| FbaI | TGATCA | 1 cut(s) | 378 |
| FokI | GGATG | 1 cut(s) | 323 |
| HaeIII | GGCC | 1 cut(s) | 209 |
| HapII | CCGG | 1 cut(s) | 104 |
| Hin1II | CATG | 1 cut(s) | 133 |
| HindIII | AAGCTT | 1 cut(s) | 270 |
| HpaII | CCGG | 1 cut(s) | 104 |
| HphI | GGTGA | 3 cut(s) | 118, 388, 473 |
| Hpy188I | TCNGA | 2 cut(s) | 383, 477 |
| Hpy188III | TCNNGA | 4 cut(s) | 104, 341, 394, 446 |
| Hpy99I | CGWCG | 1 cut(s) | 79 |
| HpyAV | CCTTC | 1 cut(s) | 487 |
| HpyCH4III | ACNGT | 2 cut(s) | 75, 288 |
| HpyCH4V | TGCA | 3 cut(s) | 17, 88, 224 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 42 |
| Hsp92II | CATG | 1 cut(s) | 133 |
| Kpn2I | TCCGGA | 1 cut(s) | 103 |
| Ksp22I | TGATCA | 1 cut(s) | 378 |
| Kzo9I | GATC | 3 cut(s) | 118, 345, 378 |
| LguI | GCTCTTC | 1 cut(s) | 410 |
| LmnI | GCTCC | 1 cut(s) | 265 |
| LpnPI | CCDG | 4 cut(s) | 59, 117, 354, 421 |
| LweI | GCATC | 1 cut(s) | 451 |
| MaeIII | GTNAC | 1 cut(s) | 236 |
| MalI | GATC | 3 cut(s) | 120, 347, 380 |
| MboI | GATC | 3 cut(s) | 118, 345, 378 |
| MboII | GAAGA | 1 cut(s) | 427 |
| MluCI | AATT | 5 cut(s) | 12, 99, 146, 179, 449 |
| MnlI | CCTC | 2 cut(s) | 156, 162 |
| MroI | TCCGGA | 1 cut(s) | 103 |
| MseI | TTAA | 2 cut(s) | 183, 372 |
| MspI | CCGG | 1 cut(s) | 104 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 42 |
| NcoI | CCATGG | 1 cut(s) | 129 |
| NdeI | CATATG | 1 cut(s) | 156 |
| NdeII | GATC | 3 cut(s) | 118, 345, 378 |
| NlaIII | CATG | 1 cut(s) | 133 |
| NlaIV | GGNNCC | 2 cut(s) | 261, 296 |
| PciSI | GCTCTTC | 1 cut(s) | 410 |
| PpuMI | RGGWCCY | 1 cut(s) | 294 |
| PsiI | TTATAA | 1 cut(s) | 144 |
| Psp5II | RGGWCCY | 1 cut(s) | 294 |
| PspN4I | GGNNCC | 2 cut(s) | 261, 296 |
| PspPI | GGNCC | 2 cut(s) | 294, 338 |
| PspPPI | RGGWCCY | 1 cut(s) | 294 |
| SapI | GCTCTTC | 1 cut(s) | 410 |
| SaqAI | TTAA | 2 cut(s) | 183, 372 |
| Sau3AI | GATC | 3 cut(s) | 118, 345, 378 |
| Sau96I | GGNCC | 2 cut(s) | 294, 338 |
| SetI | ASST | 6 cut(s) | 94, 154, 274, 378, 422, 509 |
| SfaNI | GCATC | 1 cut(s) | 451 |
| SinI | GGWCC | 2 cut(s) | 294, 338 |
| SmlI | CTYRAG | 1 cut(s) | 392 |
| SmoI | CTYRAG | 1 cut(s) | 392 |
| Sse9I | AATT | 5 cut(s) | 12, 99, 146, 179, 449 |
| SsiI | CCGC | 1 cut(s) | 59 |
| StyI | CCWWGG | 2 cut(s) | 129, 488 |
| TaaI | ACNGT | 2 cut(s) | 75, 288 |
| TasI | AATT | 5 cut(s) | 12, 99, 146, 179, 449 |
| Tru1I | TTAA | 2 cut(s) | 183, 372 |
| Tru9I | TTAA | 2 cut(s) | 183, 372 |
| TscAI | CASTG | 1 cut(s) | 293 |
| TspDTI | ATGAA | 2 cut(s) | 17, 327 |
| TspRI | CASTG | 1 cut(s) | 293 |
| VpaK11BI | GGWCC | 2 cut(s) | 294, 338 |
| XapI | RAATTY | 1 cut(s) | 449 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 248 |