DNA RNA polymerases superfamily protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 124 |
| AciI | CCGC | 2 cut(s) | 9, 305 |
| AclWI | GGATC | 1 cut(s) | 378 |
| AcsI | RAATTY | 1 cut(s) | 119 |
| AfaI | GTAC | 1 cut(s) | 312 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 202, 203 |
| AflIII | ACRYGT | 1 cut(s) | 61 |
| AgsI | TTSAA | 5 cut(s) | 34, 259, 274, 296, 386 |
| AjnI | CCWGG | 3 cut(s) | 148, 196, 475 |
| AluBI | AGCT | 4 cut(s) | 28, 302, 350, 497 |
| AluI | AGCT | 4 cut(s) | 28, 302, 350, 497 |
| Alw21I | GWGCWC | 1 cut(s) | 352 |
| AlwI | GGATC | 1 cut(s) | 378 |
| Aor13HI | TCCGGA | 1 cut(s) | 124 |
| AoxI | GGCC | 1 cut(s) | 483 |
| ApeKI | GCWGC | 1 cut(s) | 302 |
| ApoI | RAATTY | 1 cut(s) | 119 |
| AseI | ATTAAT | 1 cut(s) | 411 |
| AspS9I | GGNCC | 1 cut(s) | 483 |
| BanII | GRGCYC | 1 cut(s) | 352 |
| BbsI | GAAGAC | 2 cut(s) | 374, 521 |
| Bbv12I | GWGCWC | 1 cut(s) | 352 |
| BbvI | GCAGC | 1 cut(s) | 289 |
| BccI | CCATC | 1 cut(s) | 423 |
| BciT130I | CCWGG | 3 cut(s) | 150, 198, 477 |
| BfaI | CTAG | 2 cut(s) | 165, 249 |
| BisI | GCNGC | 1 cut(s) | 303 |
| BlsI | GCNGC | 1 cut(s) | 304 |
| BmcAI | AGTACT | 1 cut(s) | 312 |
| Bme1390I | CCNGG | 3 cut(s) | 150, 198, 477 |
| BmgT120I | GGNCC | 1 cut(s) | 483 |
| BmrFI | CCNGG | 3 cut(s) | 150, 198, 477 |
| BpiI | GAAGAC | 2 cut(s) | 374, 521 |
| BsaJI | CCNNGG | 1 cut(s) | 196 |
| BsaWI | WCCGGW | 1 cut(s) | 124 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 202, 203 |
| Bse1I | ACTGG | 1 cut(s) | 107 |
| BseAI | TCCGGA | 1 cut(s) | 124 |
| BseBI | CCWGG | 3 cut(s) | 150, 198, 477 |
| BseDI | CCNNGG | 1 cut(s) | 196 |
| BseGI | GGATG | 2 cut(s) | 133, 472 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 202, 203 |
| BseMII | CTCAG | 1 cut(s) | 12 |
| BseNI | ACTGG | 1 cut(s) | 107 |
| BseXI | GCAGC | 1 cut(s) | 289 |
| BshFI | GGCC | 1 cut(s) | 485 |
| BsiHKAI | GWGCWC | 1 cut(s) | 352 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 202, 203 |
| BsnI | GGCC | 1 cut(s) | 485 |
| Bsp1286I | GDGCHC | 1 cut(s) | 352 |
| Bsp13I | TCCGGA | 1 cut(s) | 124 |
| Bsp143I | GATC | 1 cut(s) | 370 |
| BspACI | CCGC | 2 cut(s) | 9, 305 |
| BspANI | GGCC | 1 cut(s) | 485 |
| BspCNI | CTCAG | 1 cut(s) | 13 |
| BspEI | TCCGGA | 1 cut(s) | 124 |
| BspPI | GGATC | 1 cut(s) | 378 |
| BsrI | ACTGG | 1 cut(s) | 107 |
| BssECI | CCNNGG | 1 cut(s) | 196 |
| BssMI | GATC | 1 cut(s) | 370 |
| Bst2UI | CCWGG | 3 cut(s) | 150, 198, 477 |
| Bst6I | CTCTTC | 1 cut(s) | 78 |
| BstDEI | CTNAG | 2 cut(s) | 21, 506 |
| BstF5I | GGATG | 2 cut(s) | 133, 472 |
| BstKTI | GATC | 1 cut(s) | 373 |
| BstMBI | GATC | 1 cut(s) | 370 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 17, 56 |
| BstNI | CCWGG | 3 cut(s) | 150, 198, 477 |
| BstNSI | RCATGY | 1 cut(s) | 65 |
| BstSCI | CCNGG | 3 cut(s) | 148, 196, 475 |
| BstV1I | GCAGC | 1 cut(s) | 289 |
| BstV2I | GAAGAC | 2 cut(s) | 374, 521 |
| BsuRI | GGCC | 1 cut(s) | 485 |
| BtsCI | GGATG | 2 cut(s) | 133, 472 |
| BtsIMutI | CAGTG | 1 cut(s) | 114 |
| Cfr13I | GGNCC | 1 cut(s) | 483 |
| CseI | GACGC | 1 cut(s) | 509 |
| CsiI | ACCWGGT | 1 cut(s) | 148 |
| Csp6I | GTAC | 1 cut(s) | 311 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 252, 287 |
| CviAII | CATG | 4 cut(s) | 62, 224, 266, 287 |
| CviJI | RGCY | 8 cut(s) | 28, 50, 201, 262, 302, 350, 485, 497 |
| CviKI_1 | RGCY | 8 cut(s) | 28, 50, 201, 262, 302, 350, 485, 497 |
| CviQI | GTAC | 1 cut(s) | 311 |
| DdeI | CTNAG | 2 cut(s) | 21, 506 |
| DpnI | GATC | 1 cut(s) | 372 |
| DpnII | GATC | 1 cut(s) | 370 |
| Eam1104I | CTCTTC | 1 cut(s) | 78 |
| EarI | CTCTTC | 1 cut(s) | 78 |
| Ecl136II | GAGCTC | 1 cut(s) | 350 |
| Eco24I | GRGCYC | 1 cut(s) | 352 |
| Eco53kI | GAGCTC | 1 cut(s) | 350 |
| EcoICRI | GAGCTC | 1 cut(s) | 350 |
| EcoRII | CCWGG | 3 cut(s) | 148, 196, 475 |
| EcoT38I | GRGCYC | 1 cut(s) | 352 |
| FaeI | CATG | 4 cut(s) | 65, 227, 269, 290 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 34, 66 |
| FatI | CATG | 4 cut(s) | 61, 223, 265, 286 |
| FauNDI | CATATG | 1 cut(s) | 554 |
| Fnu4HI | GCNGC | 1 cut(s) | 303 |
| FokI | GGATG | 2 cut(s) | 140, 459 |
| FriOI | GRGCYC | 1 cut(s) | 352 |
| Fsp4HI | GCNGC | 1 cut(s) | 303 |
| FspBI | CTAG | 2 cut(s) | 165, 249 |
| GluI | GCNGC | 1 cut(s) | 303 |
| HaeIII | GGCC | 1 cut(s) | 485 |
| HapII | CCGG | 1 cut(s) | 125 |
| HgaI | GACGC | 1 cut(s) | 509 |
| Hin1II | CATG | 4 cut(s) | 65, 227, 269, 290 |
| HinfI | GANTC | 1 cut(s) | 379 |
| HpaII | CCGG | 1 cut(s) | 125 |
| Hpy166II | GTNNAC | 2 cut(s) | 70, 155 |
| Hpy188III | TCNNGA | 3 cut(s) | 125, 137, 249 |
| Hpy8I | GTNNAC | 2 cut(s) | 70, 155 |
| HpyAV | CCTTC | 4 cut(s) | 474, 534, 545, 551 |
| HpyCH4V | TGCA | 3 cut(s) | 220, 317, 459 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 17, 56 |
| HpyF3I | CTNAG | 2 cut(s) | 21, 506 |
| Hsp92II | CATG | 4 cut(s) | 65, 227, 269, 290 |
| Kpn2I | TCCGGA | 1 cut(s) | 124 |
| Kzo9I | GATC | 1 cut(s) | 370 |
| LmnI | GCTCC | 1 cut(s) | 347 |
| Lsp1109I | GCAGC | 1 cut(s) | 289 |
| MabI | ACCWGGT | 1 cut(s) | 148 |
| MaeI | CTAG | 2 cut(s) | 165, 249 |
| MalI | GATC | 1 cut(s) | 372 |
| MboI | GATC | 1 cut(s) | 370 |
| MboII | GAAGA | 4 cut(s) | 95, 374, 438, 526 |
| MfeI | CAATTG | 1 cut(s) | 254 |
| MhlI | GDGCHC | 1 cut(s) | 352 |
| MluCI | AATT | 6 cut(s) | 119, 143, 254, 274, 296, 412 |
| MlyI | GAGTC | 1 cut(s) | 388 |
| MmeI | TCCRAC | 1 cut(s) | 414 |
| MnlI | CCTC | 4 cut(s) | 168, 256, 324, 411 |
| MroI | TCCGGA | 1 cut(s) | 124 |
| MseI | TTAA | 3 cut(s) | 321, 411, 444 |
| MslI | CAYNNNNRTG | 1 cut(s) | 228 |
| MspI | CCGG | 1 cut(s) | 125 |
| MspR9I | CCNGG | 3 cut(s) | 150, 198, 477 |
| MunI | CAATTG | 1 cut(s) | 254 |
| MvaI | CCWGG | 3 cut(s) | 150, 198, 477 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 17, 56 |
| NdeI | CATATG | 1 cut(s) | 554 |
| NdeII | GATC | 1 cut(s) | 370 |
| NlaIII | CATG | 4 cut(s) | 65, 227, 269, 290 |
| NspI | RCATGY | 1 cut(s) | 65 |
| PciI | ACATGT | 1 cut(s) | 61 |
| PfoI | TCCNGGA | 1 cut(s) | 475 |
| PkrI | GCNGC | 1 cut(s) | 304 |
| PleI | GAGTC | 1 cut(s) | 387 |
| PpsI | GAGTC | 1 cut(s) | 387 |
| PscI | ACATGT | 1 cut(s) | 61 |
| PshBI | ATTAAT | 1 cut(s) | 411 |
| Psp124BI | GAGCTC | 1 cut(s) | 352 |
| Psp6I | CCWGG | 3 cut(s) | 148, 196, 475 |
| PspGI | CCWGG | 3 cut(s) | 148, 196, 475 |
| PspPI | GGNCC | 1 cut(s) | 483 |
| RsaI | GTAC | 1 cut(s) | 312 |
| RsaNI | GTAC | 1 cut(s) | 311 |
| RseI | CAYNNNNRTG | 1 cut(s) | 228 |
| SacI | GAGCTC | 1 cut(s) | 352 |
| SaqAI | TTAA | 3 cut(s) | 321, 411, 444 |
| SatI | GCNGC | 1 cut(s) | 303 |
| Sau3AI | GATC | 1 cut(s) | 370 |
| Sau96I | GGNCC | 1 cut(s) | 483 |
| ScaI | AGTACT | 1 cut(s) | 312 |
| SchI | GAGTC | 1 cut(s) | 388 |
| ScrFI | CCNGG | 3 cut(s) | 150, 198, 477 |
| SduI | GDGCHC | 1 cut(s) | 352 |
| SetI | ASST | 7 cut(s) | 30, 151, 160, 294, 304, 352, 499 |
| SexAI | ACCWGGT | 1 cut(s) | 148 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 228 |
| Sse9I | AATT | 6 cut(s) | 119, 143, 254, 274, 296, 412 |
| SsiI | CCGC | 2 cut(s) | 9, 305 |
| SspI | AATATT | 1 cut(s) | 389 |
| SspMI | CTAG | 2 cut(s) | 165, 249 |
| SstI | GAGCTC | 1 cut(s) | 352 |
| StyD4I | CCNGG | 3 cut(s) | 148, 196, 475 |
| TasI | AATT | 6 cut(s) | 119, 143, 254, 274, 296, 412 |
| TatI | WGTACW | 1 cut(s) | 310 |
| Tru1I | TTAA | 3 cut(s) | 321, 411, 444 |
| Tru9I | TTAA | 3 cut(s) | 321, 411, 444 |
| TscAI | CASTG | 1 cut(s) | 114 |
| TseI | GCWGC | 1 cut(s) | 302 |
| TspGWI | ACGGA | 1 cut(s) | 383 |
| TspRI | CASTG | 1 cut(s) | 114 |
| VspI | ATTAAT | 1 cut(s) | 411 |
| XapI | RAATTY | 1 cut(s) | 119 |
| XbaI | TCTAGA | 1 cut(s) | 248 |
| XceI | RCATGY | 1 cut(s) | 65 |
| XspI | CTAG | 2 cut(s) | 165, 249 |
| ZrmI | AGTACT | 1 cut(s) | 312 |