transposition, RNA-mediated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SH3_Tf2-1 | PF24626 | 172 - 223 | 2.7e-24 | Tf2-1-like, SH3 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 268 |
| AccII | CGCG | 1 cut(s) | 162 |
| AciI | CCGC | 1 cut(s) | 268 |
| AclWI | GGATC | 2 cut(s) | 671, 745 |
| AfaI | GTAC | 4 cut(s) | 633, 668, 747, 774 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 784 |
| AflIII | ACRYGT | 2 cut(s) | 291, 685 |
| AgsI | TTSAA | 3 cut(s) | 35, 488, 830 |
| AjnI | CCWGG | 1 cut(s) | 91 |
| AluBI | AGCT | 5 cut(s) | 65, 127, 407, 698, 836 |
| AluI | AGCT | 5 cut(s) | 65, 127, 407, 698, 836 |
| Alw26I | GTCTC | 2 cut(s) | 7, 655 |
| AlwI | GGATC | 2 cut(s) | 671, 745 |
| Ama87I | CYCGRG | 2 cut(s) | 140, 379 |
| AspS9I | GGNCC | 3 cut(s) | 429, 473, 560 |
| AsuHPI | GGTGA | 1 cut(s) | 812 |
| AvaI | CYCGRG | 2 cut(s) | 140, 379 |
| AvaII | GGWCC | 3 cut(s) | 429, 473, 560 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 729, 761 |
| BccI | CCATC | 3 cut(s) | 248, 249, 343 |
| BciT130I | CCWGG | 1 cut(s) | 93 |
| BciVI | GTATCC | 1 cut(s) | 882 |
| BclI | TGATCA | 1 cut(s) | 853 |
| BcoDI | GTCTC | 2 cut(s) | 7, 655 |
| BfuI | GTATCC | 1 cut(s) | 882 |
| BglII | AGATCT | 1 cut(s) | 721 |
| BmcAI | AGTACT | 1 cut(s) | 774 |
| Bme1390I | CCNGG | 1 cut(s) | 93 |
| Bme18I | GGWCC | 3 cut(s) | 429, 473, 560 |
| BmeT110I | CYCGRG | 2 cut(s) | 140, 379 |
| BmgT120I | GGNCC | 3 cut(s) | 429, 473, 560 |
| BmiI | GGNNCC | 4 cut(s) | 396, 431, 562, 846 |
| BmrFI | CCNGG | 1 cut(s) | 93 |
| BmsI | GCATC | 3 cut(s) | 97, 154, 185 |
| BpuEI | CTTGAG | 1 cut(s) | 612 |
| BsaBI | GATNNNNATC | 1 cut(s) | 175 |
| BsaJI | CCNNGG | 1 cut(s) | 548 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 278, 308 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 784 |
| Bse1I | ACTGG | 1 cut(s) | 743 |
| Bse8I | GATNNNNATC | 1 cut(s) | 175 |
| BseBI | CCWGG | 1 cut(s) | 93 |
| BseDI | CCNNGG | 1 cut(s) | 548 |
| BseGI | GGATG | 3 cut(s) | 88, 241, 451 |
| BseJI | GATNNNNATC | 1 cut(s) | 175 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 784 |
| BseMII | CTCAG | 1 cut(s) | 255 |
| BseNI | ACTGG | 1 cut(s) | 743 |
| BseRI | GAGGAG | 1 cut(s) | 205 |
| Bsh1236I | CGCG | 1 cut(s) | 162 |
| BsiHKCI | CYCGRG | 2 cut(s) | 140, 379 |
| BslFI | GGGAC | 1 cut(s) | 546 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 784 |
| BsmAI | GTCTC | 2 cut(s) | 7, 655 |
| BsmFI | GGGAC | 1 cut(s) | 546 |
| BsoBI | CYCGRG | 2 cut(s) | 140, 379 |
| Bsp143I | GATC | 6 cut(s) | 157, 676, 721, 750, 757, 853 |
| Bsp68I | TCGCGA | 1 cut(s) | 162 |
| BspACI | CCGC | 1 cut(s) | 268 |
| BspCNI | CTCAG | 1 cut(s) | 256 |
| BspFNI | CGCG | 1 cut(s) | 162 |
| BspLI | GGNNCC | 4 cut(s) | 396, 431, 562, 846 |
| BspPI | GGATC | 2 cut(s) | 671, 745 |
| BsrBI | CCGCTC | 1 cut(s) | 268 |
| BsrI | ACTGG | 1 cut(s) | 743 |
| BssECI | CCNNGG | 1 cut(s) | 548 |
| BssMI | GATC | 6 cut(s) | 157, 676, 721, 750, 757, 853 |
| BssT1I | CCWWGG | 1 cut(s) | 548 |
| Bst2UI | CCWGG | 1 cut(s) | 93 |
| Bst4CI | ACNGT | 3 cut(s) | 371, 423, 870 |
| BstDEI | CTNAG | 2 cut(s) | 264, 542 |
| BstF5I | GGATG | 3 cut(s) | 88, 241, 451 |
| BstFNI | CGCG | 1 cut(s) | 162 |
| BstKTI | GATC | 6 cut(s) | 160, 679, 724, 753, 760, 856 |
| BstMAI | GTCTC | 2 cut(s) | 7, 655 |
| BstMBI | GATC | 6 cut(s) | 157, 676, 721, 750, 757, 853 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 173 |
| BstNI | CCWGG | 1 cut(s) | 93 |
| BstNSI | RCATGY | 2 cut(s) | 295, 689 |
| BstSCI | CCNGG | 1 cut(s) | 91 |
| BstUI | CGCG | 1 cut(s) | 162 |
| BstX2I | RGATCY | 2 cut(s) | 721, 750 |
| BstYI | RGATCY | 2 cut(s) | 721, 750 |
| BsuI | GTATCC | 1 cut(s) | 882 |
| BtgZI | GCGATG | 1 cut(s) | 177 |
| BtsCI | GGATG | 3 cut(s) | 88, 241, 451 |
| BtsI | GCAGTG | 1 cut(s) | 231 |
| BtsIMutI | CAGTG | 2 cut(s) | 231, 428 |
| BtuMI | TCGCGA | 1 cut(s) | 162 |
| Cfr13I | GGNCC | 3 cut(s) | 429, 473, 560 |
| Csp6I | GTAC | 4 cut(s) | 632, 667, 746, 773 |
| CviAII | CATG | 6 cut(s) | 131, 292, 635, 647, 655, 686 |
| CviJI | RGCY | 9 cut(s) | 65, 127, 302, 344, 395, 407, 608, 698, 836 |
| CviKI_1 | RGCY | 9 cut(s) | 65, 127, 302, 344, 395, 407, 608, 698, 836 |
| CviQI | GTAC | 4 cut(s) | 632, 667, 746, 773 |
| DdeI | CTNAG | 2 cut(s) | 264, 542 |
| DpnI | GATC | 6 cut(s) | 159, 678, 723, 752, 759, 855 |
| DpnII | GATC | 6 cut(s) | 157, 676, 721, 750, 757, 853 |
| DraI | TTTAAA | 1 cut(s) | 319 |
| Eco130I | CCWWGG | 1 cut(s) | 548 |
| Eco47I | GGWCC | 3 cut(s) | 429, 473, 560 |
| Eco88I | CYCGRG | 2 cut(s) | 140, 379 |
| EcoO109I | RGGNCCY | 1 cut(s) | 429 |
| EcoRII | CCWGG | 1 cut(s) | 91 |
| EcoT14I | CCWWGG | 1 cut(s) | 548 |
| ErhI | CCWWGG | 1 cut(s) | 548 |
| FaeI | CATG | 6 cut(s) | 134, 295, 638, 650, 658, 689 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 39, 71 |
| FaqI | GGGAC | 1 cut(s) | 546 |
| FatI | CATG | 6 cut(s) | 130, 291, 634, 646, 654, 685 |
| FauNDI | CATATG | 1 cut(s) | 730 |
| FbaI | TGATCA | 1 cut(s) | 853 |
| FokI | GGATG | 3 cut(s) | 75, 228, 458 |
| Hin1II | CATG | 6 cut(s) | 134, 295, 638, 650, 658, 689 |
| HindIII | AAGCTT | 2 cut(s) | 125, 405 |
| HinfI | GANTC | 2 cut(s) | 143, 817 |
| HphI | GGTGA | 1 cut(s) | 812 |
| Hpy166II | GTNNAC | 3 cut(s) | 112, 199, 530 |
| Hpy188I | TCNGA | 3 cut(s) | 157, 265, 779 |
| Hpy188III | TCNNGA | 4 cut(s) | 140, 161, 476, 764 |
| Hpy8I | GTNNAC | 3 cut(s) | 112, 199, 530 |
| Hpy99I | CGWCG | 1 cut(s) | 765 |
| HpyAV | CCTTC | 1 cut(s) | 690 |
| HpyCH4III | ACNGT | 3 cut(s) | 371, 423, 870 |
| HpyCH4V | TGCA | 4 cut(s) | 88, 98, 176, 359 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 173 |
| HpyF3I | CTNAG | 2 cut(s) | 264, 542 |
| Hsp92II | CATG | 6 cut(s) | 134, 295, 638, 650, 658, 689 |
| Ksp22I | TGATCA | 1 cut(s) | 853 |
| Kzo9I | GATC | 6 cut(s) | 157, 676, 721, 750, 757, 853 |
| LmnI | GCTCC | 1 cut(s) | 400 |
| LpnPI | CCDG | 8 cut(s) | 78, 98, 105, 489, 708, 756, 836, 861 |
| LweI | GCATC | 3 cut(s) | 97, 154, 185 |
| MaeIII | GTNAC | 1 cut(s) | 690 |
| MalI | GATC | 6 cut(s) | 159, 678, 723, 752, 759, 855 |
| MbiI | CCGCTC | 1 cut(s) | 268 |
| MboI | GATC | 6 cut(s) | 157, 676, 721, 750, 757, 853 |
| MboII | GAAGA | 4 cut(s) | 731, 746, 749, 842 |
| MflI | RGATCY | 2 cut(s) | 721, 750 |
| MluCI | AATT | 7 cut(s) | 117, 218, 224, 314, 504, 582, 672 |
| MlyI | GAGTC | 1 cut(s) | 152 |
| MnlI | CCTC | 9 cut(s) | 183, 186, 255, 280, 291, 527, 624, 807, 855 |
| MseI | TTAA | 4 cut(s) | 42, 318, 507, 801 |
| MslI | CAYNNNNRTG | 1 cut(s) | 93 |
| MspR9I | CCNGG | 1 cut(s) | 93 |
| MvaI | CCWGG | 1 cut(s) | 93 |
| MvnI | CGCG | 1 cut(s) | 162 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 173 |
| NdeI | CATATG | 1 cut(s) | 730 |
| NdeII | GATC | 6 cut(s) | 157, 676, 721, 750, 757, 853 |
| NlaIII | CATG | 6 cut(s) | 134, 295, 638, 650, 658, 689 |
| NlaIV | GGNNCC | 4 cut(s) | 396, 431, 562, 846 |
| NruI | TCGCGA | 1 cut(s) | 162 |
| NspI | RCATGY | 2 cut(s) | 295, 689 |
| PaeR7I | CTCGAG | 1 cut(s) | 379 |
| PciI | ACATGT | 2 cut(s) | 291, 685 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 166 |
| PfeI | GAWTC | 1 cut(s) | 817 |
| PleI | GAGTC | 1 cut(s) | 151 |
| PpsI | GAGTC | 1 cut(s) | 151 |
| PpuMI | RGGWCCY | 1 cut(s) | 429 |
| PscI | ACATGT | 2 cut(s) | 291, 685 |
| Psp5II | RGGWCCY | 1 cut(s) | 429 |
| Psp6I | CCWGG | 1 cut(s) | 91 |
| PspGI | CCWGG | 1 cut(s) | 91 |
| PspN4I | GGNNCC | 4 cut(s) | 396, 431, 562, 846 |
| PspPI | GGNCC | 3 cut(s) | 429, 473, 560 |
| PspPPI | RGGWCCY | 1 cut(s) | 429 |
| PspXI | VCTCGAGB | 1 cut(s) | 379 |
| PsuI | RGATCY | 2 cut(s) | 721, 750 |
| RruI | TCGCGA | 1 cut(s) | 162 |
| RsaI | GTAC | 4 cut(s) | 633, 668, 747, 774 |
| RsaNI | GTAC | 4 cut(s) | 632, 667, 746, 773 |
| RseI | CAYNNNNRTG | 1 cut(s) | 93 |
| SaqAI | TTAA | 4 cut(s) | 42, 318, 507, 801 |
| Sau3AI | GATC | 6 cut(s) | 157, 676, 721, 750, 757, 853 |
| Sau96I | GGNCC | 3 cut(s) | 429, 473, 560 |
| ScaI | AGTACT | 1 cut(s) | 774 |
| SchI | GAGTC | 1 cut(s) | 152 |
| ScrFI | CCNGG | 1 cut(s) | 93 |
| SfaNI | GCATC | 3 cut(s) | 97, 154, 185 |
| Sfr274I | CTCGAG | 1 cut(s) | 379 |
| SinI | GGWCC | 3 cut(s) | 429, 473, 560 |
| SlaI | CTCGAG | 1 cut(s) | 379 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 93 |
| SmlI | CTYRAG | 2 cut(s) | 379, 627 |
| SmoI | CTYRAG | 2 cut(s) | 379, 627 |
| Sse9I | AATT | 7 cut(s) | 117, 218, 224, 314, 504, 582, 672 |
| SsiI | CCGC | 1 cut(s) | 268 |
| StyD4I | CCNGG | 1 cut(s) | 91 |
| StyI | CCWWGG | 1 cut(s) | 548 |
| TaaI | ACNGT | 3 cut(s) | 371, 423, 870 |
| TaqI | TCGA | 1 cut(s) | 380 |
| TasI | AATT | 7 cut(s) | 117, 218, 224, 314, 504, 582, 672 |
| TatI | WGTACW | 4 cut(s) | 631, 666, 745, 772 |
| TfiI | GAWTC | 1 cut(s) | 817 |
| Tru1I | TTAA | 4 cut(s) | 42, 318, 507, 801 |
| Tru9I | TTAA | 4 cut(s) | 42, 318, 507, 801 |
| TscAI | CASTG | 2 cut(s) | 238, 428 |
| TspDTI | ATGAA | 4 cut(s) | 75, 119, 462, 747 |
| TspRI | CASTG | 2 cut(s) | 238, 428 |
| VpaK11BI | GGWCC | 3 cut(s) | 429, 473, 560 |
| XceI | RCATGY | 2 cut(s) | 295, 689 |
| XhoI | CTCGAG | 1 cut(s) | 379 |
| ZrmI | AGTACT | 1 cut(s) | 774 |