DNA RNA polymerases superfamily protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 293 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 338 |
| AgsI | TTSAA | 3 cut(s) | 293, 299, 322 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 285, 317 |
| AluBI | AGCT | 2 cut(s) | 116, 264 |
| AluI | AGCT | 2 cut(s) | 116, 264 |
| Alw26I | GTCTC | 1 cut(s) | 226 |
| ApoI | RAATTY | 1 cut(s) | 293 |
| AspS9I | GGNCC | 2 cut(s) | 138, 182 |
| AsuHPI | GGTGA | 2 cut(s) | 232, 317 |
| AvaII | GGWCC | 2 cut(s) | 138, 182 |
| BccI | CCATC | 2 cut(s) | 52, 235 |
| BclI | TGATCA | 1 cut(s) | 222 |
| BcoDI | GTCTC | 1 cut(s) | 226 |
| BfaI | CTAG | 1 cut(s) | 394 |
| Bme18I | GGWCC | 2 cut(s) | 138, 182 |
| BmgT120I | GGNCC | 2 cut(s) | 138, 182 |
| BmiI | GGNNCC | 2 cut(s) | 105, 140 |
| BmsI | GCATC | 1 cut(s) | 295 |
| BsaJI | CCNNGG | 2 cut(s) | 332, 377 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 338 |
| BseDI | CCNNGG | 2 cut(s) | 332, 377 |
| BseGI | GGATG | 1 cut(s) | 160 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 338 |
| BseMII | CTCAG | 1 cut(s) | 177 |
| BslFI | GGGAC | 1 cut(s) | 375 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 338 |
| BsmAI | GTCTC | 1 cut(s) | 226 |
| BsmFI | GGGAC | 1 cut(s) | 375 |
| Bsp143I | GATC | 2 cut(s) | 198, 222 |
| BspCNI | CTCAG | 1 cut(s) | 178 |
| BspLI | GGNNCC | 2 cut(s) | 105, 140 |
| BspQI | GCTCTTC | 1 cut(s) | 254 |
| BssECI | CCNNGG | 2 cut(s) | 332, 377 |
| BssMI | GATC | 2 cut(s) | 198, 222 |
| BssT1I | CCWWGG | 1 cut(s) | 377 |
| Bst4CI | ACNGT | 2 cut(s) | 80, 132 |
| Bst6I | CTCTTC | 1 cut(s) | 254 |
| BstDEI | CTNAG | 2 cut(s) | 186, 371 |
| BstDSI | CCRYGG | 1 cut(s) | 332 |
| BstF5I | GGATG | 1 cut(s) | 160 |
| BstKTI | GATC | 2 cut(s) | 201, 225 |
| BstMAI | GTCTC | 1 cut(s) | 226 |
| BstMBI | GATC | 2 cut(s) | 198, 222 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 150 |
| BtgI | CCRYGG | 1 cut(s) | 332 |
| BtsCI | GGATG | 1 cut(s) | 160 |
| BtsIMutI | CAGTG | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 2 cut(s) | 138, 182 |
| CviJI | RGCY | 6 cut(s) | 11, 53, 104, 116, 245, 264 |
| CviKI_1 | RGCY | 6 cut(s) | 11, 53, 104, 116, 245, 264 |
| DdeI | CTNAG | 2 cut(s) | 186, 371 |
| DpnI | GATC | 2 cut(s) | 200, 224 |
| DpnII | GATC | 2 cut(s) | 198, 222 |
| DraI | TTTAAA | 1 cut(s) | 28 |
| Eam1104I | CTCTTC | 1 cut(s) | 254 |
| EarI | CTCTTC | 1 cut(s) | 254 |
| Eco130I | CCWWGG | 1 cut(s) | 377 |
| Eco47I | GGWCC | 2 cut(s) | 138, 182 |
| EcoO109I | RGGNCCY | 1 cut(s) | 138 |
| EcoT14I | CCWWGG | 1 cut(s) | 377 |
| ErhI | CCWWGG | 1 cut(s) | 377 |
| FaiI | YATR | 7 cut(s) | 70, 72, 101, 121, 123, 148, 384 |
| FaqI | GGGAC | 1 cut(s) | 375 |
| FbaI | TGATCA | 1 cut(s) | 222 |
| FokI | GGATG | 1 cut(s) | 167 |
| FspBI | CTAG | 1 cut(s) | 394 |
| HindIII | AAGCTT | 1 cut(s) | 114 |
| HphI | GGTGA | 2 cut(s) | 232, 317 |
| Hpy166II | GTNNAC | 1 cut(s) | 359 |
| Hpy188I | TCNGA | 1 cut(s) | 227 |
| Hpy188III | TCNNGA | 2 cut(s) | 185, 290 |
| Hpy8I | GTNNAC | 1 cut(s) | 359 |
| HpyAV | CCTTC | 1 cut(s) | 331 |
| HpyCH4III | ACNGT | 2 cut(s) | 80, 132 |
| HpyCH4V | TGCA | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 2 cut(s) | 186, 371 |
| Ksp22I | TGATCA | 1 cut(s) | 222 |
| Kzo9I | GATC | 2 cut(s) | 198, 222 |
| LguI | GCTCTTC | 1 cut(s) | 254 |
| LmnI | GCTCC | 1 cut(s) | 109 |
| LpnPI | CCDG | 2 cut(s) | 198, 265 |
| LweI | GCATC | 1 cut(s) | 295 |
| MaeI | CTAG | 1 cut(s) | 394 |
| MaeIII | GTNAC | 1 cut(s) | 80 |
| MalI | GATC | 2 cut(s) | 200, 224 |
| MboI | GATC | 2 cut(s) | 198, 222 |
| MboII | GAAGA | 1 cut(s) | 271 |
| MluCI | AATT | 2 cut(s) | 23, 293 |
| MseI | TTAA | 2 cut(s) | 27, 216 |
| NdeII | GATC | 2 cut(s) | 198, 222 |
| NlaIV | GGNNCC | 2 cut(s) | 105, 140 |
| PciSI | GCTCTTC | 1 cut(s) | 254 |
| PpuMI | RGGWCCY | 1 cut(s) | 138 |
| Psp5II | RGGWCCY | 1 cut(s) | 138 |
| PspN4I | GGNNCC | 2 cut(s) | 105, 140 |
| PspPI | GGNCC | 2 cut(s) | 138, 182 |
| PspPPI | RGGWCCY | 1 cut(s) | 138 |
| SapI | GCTCTTC | 1 cut(s) | 254 |
| SaqAI | TTAA | 2 cut(s) | 27, 216 |
| Sau3AI | GATC | 2 cut(s) | 198, 222 |
| Sau96I | GGNCC | 2 cut(s) | 138, 182 |
| SetI | ASST | 5 cut(s) | 118, 222, 266, 353, 383 |
| SfaNI | GCATC | 1 cut(s) | 295 |
| SinI | GGWCC | 2 cut(s) | 138, 182 |
| Sse9I | AATT | 2 cut(s) | 23, 293 |
| SspMI | CTAG | 1 cut(s) | 394 |
| StyI | CCWWGG | 1 cut(s) | 377 |
| TaaI | ACNGT | 2 cut(s) | 80, 132 |
| TaqI | TCGA | 1 cut(s) | 89 |
| TasI | AATT | 2 cut(s) | 23, 293 |
| Tru1I | TTAA | 2 cut(s) | 27, 216 |
| Tru9I | TTAA | 2 cut(s) | 27, 216 |
| TscAI | CASTG | 1 cut(s) | 137 |
| TspDTI | ATGAA | 1 cut(s) | 171 |
| TspGWI | ACGGA | 1 cut(s) | 321 |
| TspRI | CASTG | 1 cut(s) | 137 |
| VpaK11BI | GGWCC | 2 cut(s) | 138, 182 |
| XapI | RAATTY | 1 cut(s) | 293 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 92 |
| XspI | CTAG | 1 cut(s) | 394 |