RchiOBHm_Chr2g0168091

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000094
Physical Location & Seq
Reverse (-)
82549662 .. 82550650
989 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53580

Sequence Viewer

Length: 939 bp
ATGAGGTGTGAGGCTAGATATCTGGACGGTTCCCGACCTTTAGAGATTGGCGGTCCTAGTCAGGGGCCATCTAAGAGAATTGCCTCTAGTTCGGGTTCTGCATCGTCATCAGGCAGTAGGCCGAGCAGTTCAGATTCTAGCTCTCGTCAGCGTTTCAGGGGACGCTTCAAGAGGCCTAGACAGACAGGTAGGAGACAGTTCAGGGGTGGCACTGCTAGTTCCAGTGGAGGCTTTGGTAGACAGGCGATTCCGAAAGACTATCCCGAGTGTGCTACTTGTGGTAGGCACCATGTGGGCCCGTGTCAGGCAGGTGTGGGGACTTGTTACCAGTGTGGCCAGTGGGGTCACTACAGGAGAGAATGCCCTCAGTTGACCCAGGGAGTCTTCACTACTACTAGTCAGAGTATGGGTCAGACCTCTGTGGGTGCTACTAGTTCGGGTTCTTATGGCAGTTTGTCAGGCAGGAGCAGCACACAGCCGGGTCGTGGACAGAGAGGGCGTCCAGTGACCCAGGCCCGTCTTCATGCTATGACCCAGCAGGAGGGTCGCACTGCACCGAACGTCATTATGGGTATGTTAGTTGTTTTTGGCCAACCAGCTTTTATTTTGATTGATCCTGGAGCCTCTCACTCCTTTATGTCTAAGAGGTTTTCTTTCTTTGCTAATGTGCCCCCATCTCTCCTACTCGGAGAGTGGCATGTTGTTCTACCATCGGGGGAAAGACATAGAATTGAGTGGGTACATCGTTTTTGTGGAGTGTTTGTAGAAGGAGTTTGCTTAGAGGCGGACTTGATTCCATTTGAGTTAGTGGAGTTTGATGTAATCCTAGGGATGGATTTCCTTCGGATGCATCATGCCTTAGTGGATTGCTTTTGTAGTACTGTATTATTTCGGAGTCCGGGTAAGCCAGTTGTCACCTTTTATGGTGAACGGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2 RVT_1 Retrotrans_gag rve zf-CCHC

Protein Analysis

312

Amino Acids

34.02

Weight (kDa)

9.7

Isoelectric Point (pI)

56.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVP_2 PF08284 169 - 298 9.4e-27 Retroviral aspartyl protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42190
fragaria_vesca FvH4_1g22371 FvH4_1g23261 FvH4_1g27933 FvH4_1g27934 FvH4_1g29231 FvH4_2g02781 FvH4_2g08031 FvH4_2g08581 FvH4_3g06961 FvH4_3g06962 FvH4_3g13531 FvH4_3g14391 FvH4_3g14392 FvH4_3g18622 FvH4_3g18964 FvH4_3g26314 FvH4_3g28781 FvH4_3g30771 FvH4_3g30772 FvH4_3g31752 FvH4_3g32803 FvH4_3g35751 FvH4_3g35752 FvH4_4g02151 FvH4_4g02642 FvH4_4g05523 FvH4_4g05524 FvH4_4g06574 FvH4_4g06722 FvH4_4g08644 FvH4_4g08645 FvH4_4g08646 FvH4_4g08851 FvH4_4g08971 FvH4_4g09081 FvH4_4g09243 FvH4_4g09244 FvH4_4g09283 FvH4_4g10021 FvH4_4g10032 FvH4_4g10033 FvH4_4g10182 FvH4_4g10361 FvH4_4g12502 FvH4_4g12503 FvH4_4g13341 FvH4_4g13942 FvH4_4g13943 FvH4_4g13944 FvH4_4g14432 FvH4_4g14822 FvH4_4g14823 FvH4_4g15291 FvH4_4g15292 FvH4_4g15293 FvH4_4g15471 FvH4_4g15583 FvH4_4g15584 FvH4_4g15585 FvH4_4g15586 FvH4_4g15587 FvH4_4g15591 FvH4_4g15592 FvH4_4g15593 FvH4_4g16179 FvH4_4g18131 FvH4_4g21031 FvH4_4g22021 FvH4_4g22021 FvH4_4g22042 FvH4_5g03402 FvH4_5g07411 FvH4_5g13881 FvH4_5g15792 FvH4_5g24682 FvH4_5g24911 FvH4_5g25322 FvH4_5g25641 FvH4_5g36692 FvH4_5g38072 FvH4_5g38171 FvH4_6g05202 FvH4_6g08531 FvH4_6g16342 FvH4_6g21771 FvH4_6g23303 FvH4_6g23961 FvH4_6g25381 FvH4_6g27021 FvH4_6g27022 FvH4_6g30091 FvH4_6g30092 FvH4_7g02051 FvH4_7g06031 FvH4_7g07031 FvH4_7g07581 FvH4_7g08381 FvH4_7g11551 FvH4_7g19711 FvH4_7g25621 FvH4_7g29722
malus_domestica MD06G1134500.v1.1 MD09G1067600.v1.1 MD13G1145500.v1.1 MD15G1166500.v1.1 MD16G1270000.v1.1
prunus_persica Prupe.7G030900_v2.0.a1
pyrus_communis pycom01g00710 pycom01g03760 pycom03g10770 pycom04g02180 pycom05g08050 pycom06g04140 pycom06g11110 pycom07g07550 pycom07g21570 pycom08g17240 pycom09g13900 pycom09g19570 pycom10g22300 pycom11g03210 pycom11g13750 pycom11g24890 pycom12561g00270 pycom12668g00020 pycom12g11280 pycom12g20720 pycom12g20730 pycom13g21410 pycom13g21660 pycom14g06010 pycom14g06370 pycom14g12800 pycom16g21440 pycom16g22530 pycom17g02030 pycom420g00170 pycom50g00020 pycom5153684g00110 pycom520g00860 pycom581g00060
rosa_chinensis RchiOBHm_Chr0c08g0498091 RchiOBHm_Chr0c08g0498101 RchiOBHm_Chr1g0326991 RchiOBHm_Chr2g0084311 RchiOBHm_Chr2g0090701 RchiOBHm_Chr2g0098591 RchiOBHm_Chr2g0109491 RchiOBHm_Chr2g0109501 RchiOBHm_Chr2g0130801 RchiOBHm_Chr2g0145931 RchiOBHm_Chr2g0168091 RchiOBHm_Chr3g0457081 RchiOBHm_Chr3g0457091 RchiOBHm_Chr3g0467781 RchiOBHm_Chr3g0467791 RchiOBHm_Chr3g0493771 RchiOBHm_Chr3g0494051 RchiOBHm_Chr3g0496881 RchiOBHm_Chr4g0401391 RchiOBHm_Chr4g0414861 RchiOBHm_Chr4g0424081 RchiOBHm_Chr5g0009611 RchiOBHm_Chr5g0049881 RchiOBHm_Chr5g0050351 RchiOBHm_Chr5g0053791 RchiOBHm_Chr5g0078031 RchiOBHm_Chr6g0256481 RchiOBHm_Chr6g0271231 RchiOBHm_Chr6g0286381 RchiOBHm_Chr7g0197101 RchiOBHm_Chr7g0221891 RchiOBHm_Chr7g0237801 RchiOBHm_Chr7g0237821
rosa_multiflora Rmu_sc0000509.1_g000034 Rmu_sc0004751.1_g000014 Rmu_sc0008546.1_g000002 Rmu_sc0009320.1_g000003 Rmu_sc0010661.1_g000006 Rmu_sc0029652.1_g000002
rosa_roxburghii Rroxscaffold_10G00433150 Rroxscaffold_15G00447630 Rroxscaffold_26G00447790 Rroxscaffold_29G00441810 Rroxscaffold_32G00442860 Rroxscaffold_33G00439800 Rroxscaffold_34G00443230 Rroxscaffold_3G00220560 Rroxscaffold_3G00227370 Rroxscaffold_3G00239080 Rroxscaffold_3G00239090 Rroxscaffold_3G00273190 Rroxscaffold_4G00323530 Rroxscaffold_4G00326840 Rroxscaffold_57G00443110 Rroxscaffold_5G00338590 Rroxscaffold_5G00347530 Rroxscaffold_68G00446990 Rroxscaffold_76G00448570 Rroxscaffold_90G00448860
rosa_rugosa Rorug06G0233600
rosa_samantha Rh3CG302700 Rh6DG286700
rosa_wichuraiana Rw0G002280 Rw0G004080 Rw0G011830 Rw1G003690 Rw1G008800 Rw1G009130 Rw1G009140 Rw1G009150 Rw1G009160 Rw1G009410 Rw1G009580 Rw1G012770 Rw1G015850 Rw1G026860 Rw2G003780 Rw2G006480 Rw2G016520 Rw2G016960 Rw2G018170 Rw2G025180 Rw2G025510 Rw2G025610 Rw2G025750 Rw2G025920 Rw2G029950 Rw2G046360 Rw2G046370 Rw2G046380 Rw3G009070 Rw3G025820 Rw3G027340 Rw3G027900 Rw3G028150 Rw3G029060 Rw4G002440 Rw4G005960 Rw4G007520 Rw4G011970 Rw4G011980 Rw4G012190 Rw4G012530 Rw4G018490 Rw4G026380 Rw5G003970 Rw5G030920 Rw5G031780 Rw5G031900 Rw5G033030 Rw5G033040 Rw5G036330 Rw5G039730 Rw5G048110 Rw6G006670 Rw6G007910 Rw6G009720 Rw6G010990 Rw6G012930 Rw6G012940 Rw6G013420 Rw6G014690 Rw6G015290 Rw6G015790 Rw6G015920 Rw6G036510 Rw7G016650 Rw7G023140 Rw7G028650 Rw7G036450 Rw7G036460 Rw7G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 299
Acc36I ACCTGC 1 cut(s) 299
AccB1I GGYRCC 1 cut(s) 285
AccI GTMKAC 1 cut(s) 238
AciI CCGC 2 cut(s) 51, 785
AclWI GGATC 1 cut(s) 608
AcoI YGGCCR 2 cut(s) 334, 589
AcyI GRCGYC 1 cut(s) 499
AdeI CACNNNGTG 1 cut(s) 292
AfaI GTAC 2 cut(s) 741, 880
AfiI CCNNNNNNNGG 5 cut(s) 62, 304, 485, 541, 832
AgsI TTSAA 1 cut(s) 169
AhlI ACTAGT 2 cut(s) 395, 431
AjnI CCWGG 3 cut(s) 375, 510, 616
AluBI AGCT 2 cut(s) 141, 599
AluI AGCT 2 cut(s) 141, 599
Alw26I GTCTC 1 cut(s) 187
AlwI GGATC 1 cut(s) 608
Ama87I CYCGRG 1 cut(s) 263
AoxI GGCC 7 cut(s) 65, 119, 173, 295, 334, 513, 589
ApaI GGGCCC 1 cut(s) 299
ApeKI GCWGC 1 cut(s) 468
AspA2I CCTAGG 1 cut(s) 826
AspS9I GGNCC 5 cut(s) 53, 65, 295, 296, 514
AsuC2I CCSGG 2 cut(s) 480, 900
AsuHPI GGTGA 2 cut(s) 907, 938
AvaI CYCGRG 1 cut(s) 263
AvaII GGWCC 1 cut(s) 53
AvrII CCTAGG 1 cut(s) 826
BaeGI GKGCMC 2 cut(s) 299, 672
BalI TGGCCA 2 cut(s) 336, 591
BanI GGYRCC 1 cut(s) 285
BanII GRGCYC 1 cut(s) 299
BbsI GAAGAC 2 cut(s) 376, 512
BbvI GCAGC 1 cut(s) 480
BccI CCATC 4 cut(s) 76, 682, 718, 826
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciT130I CCWGG 3 cut(s) 377, 512, 618
BcnI CCSGG 2 cut(s) 480, 900
BcoDI GTCTC 1 cut(s) 187
BcuI ACTAGT 2 cut(s) 395, 431
BfaI CTAG 9 cut(s) 15, 57, 87, 138, 177, 216, 396, 432, 827
BfmI CTRYAG 1 cut(s) 349
BfuAI ACCTGC 1 cut(s) 299
BisI GCNGC 1 cut(s) 469
BlnI CCTAGG 1 cut(s) 826
BlsI GCNGC 1 cut(s) 470
BmcAI AGTACT 1 cut(s) 880
Bme1390I CCNGG 5 cut(s) 377, 480, 512, 618, 900
Bme18I GGWCC 1 cut(s) 53
BmeT110I CYCGRG 1 cut(s) 263
BmgT120I GGNCC 5 cut(s) 53, 65, 295, 296, 514
BmiI GGNNCC 5 cut(s) 31, 66, 287, 297, 622
BmrFI CCNGG 5 cut(s) 377, 480, 512, 618, 900
BmsI GCATC 3 cut(s) 110, 837, 859
BpiI GAAGAC 2 cut(s) 376, 512
BpmI CTGGAG 1 cut(s) 639
BpuMI CCSGG 2 cut(s) 480, 900
BsaHI GRCGYC 1 cut(s) 499
BsaJI CCNNGG 4 cut(s) 375, 376, 510, 826
BsaXI ACNNNNNCTCC 4 cut(s) 747, 777, 886, 916
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 304, 485, 541, 832
Bse1I ACTGG 5 cut(s) 222, 328, 337, 503, 908
BseBI CCWGG 3 cut(s) 377, 512, 618
BseDI CCNNGG 4 cut(s) 375, 376, 510, 826
BseGI GGATG 2 cut(s) 837, 852
BseLI CCNNNNNNNGG 5 cut(s) 62, 304, 485, 541, 832
BseMII CTCAG 1 cut(s) 380
BseNI ACTGG 5 cut(s) 222, 328, 337, 503, 908
BseSI GKGCMC 2 cut(s) 299, 672
BseXI GCAGC 1 cut(s) 480
BseYI CCCAGC 1 cut(s) 534
BsgI GTGCAG 1 cut(s) 537
BshFI GGCC 7 cut(s) 67, 121, 175, 297, 336, 515, 591
BshNI GGYRCC 1 cut(s) 285
BsiHKCI CYCGRG 1 cut(s) 263
BsiSI CCGG 2 cut(s) 479, 899
BslFI GGGAC 2 cut(s) 174, 331
BslI CCNNNNNNNGG 5 cut(s) 62, 304, 485, 541, 832
BsmAI GTCTC 1 cut(s) 187
BsmFI GGGAC 2 cut(s) 174, 331
BsmI GAATGC 1 cut(s) 365
BsnI GGCC 7 cut(s) 67, 121, 175, 297, 336, 515, 591
BsoBI CYCGRG 1 cut(s) 263
Bsp120I GGGCCC 1 cut(s) 295
Bsp1286I GDGCHC 2 cut(s) 299, 672
Bsp143I GATC 1 cut(s) 613
BspACI CCGC 2 cut(s) 51, 785
BspANI GGCC 7 cut(s) 67, 121, 175, 297, 336, 515, 591
BspCNI CTCAG 1 cut(s) 379
BspLI GGNNCC 5 cut(s) 31, 66, 287, 297, 622
BspMI ACCTGC 1 cut(s) 299
BspPI GGATC 1 cut(s) 608
BspT107I GGYRCC 1 cut(s) 285
BsrI ACTGG 5 cut(s) 222, 328, 337, 503, 908
BssECI CCNNGG 4 cut(s) 375, 376, 510, 826
BssMI GATC 1 cut(s) 613
BssNI GRCGYC 1 cut(s) 499
BssT1I CCWWGG 1 cut(s) 826
Bst2UI CCWGG 3 cut(s) 377, 512, 618
Bst4CI ACNGT 3 cut(s) 29, 198, 883
BstACI GRCGYC 1 cut(s) 499
BstDEI CTNAG 5 cut(s) 72, 366, 642, 778, 859
BstF5I GGATG 2 cut(s) 837, 852
BstKTI GATC 1 cut(s) 616
BstMAI GTCTC 1 cut(s) 187
BstMBI GATC 1 cut(s) 613
BstMWI GCNNNNNNNGC 1 cut(s) 468
BstNI CCWGG 3 cut(s) 377, 512, 618
BstNSI RCATGY 1 cut(s) 701
BstSCI CCNGG 5 cut(s) 375, 478, 510, 616, 898
BstSFI CTRYAG 1 cut(s) 349
BstSLI GKGCMC 2 cut(s) 299, 672
BstV1I GCAGC 1 cut(s) 480
BstV2I GAAGAC 2 cut(s) 376, 512
BsuRI GGCC 7 cut(s) 67, 121, 175, 297, 336, 515, 591
BtsCI GGATG 2 cut(s) 837, 852
BtsI GCAGTG 2 cut(s) 210, 549
BtsIMutI CAGTG 6 cut(s) 210, 229, 335, 344, 510, 549
BveI ACCTGC 1 cut(s) 299
Cfr13I GGNCC 5 cut(s) 53, 65, 295, 296, 514
CseI GACGC 2 cut(s) 171, 488
Csp6I GTAC 2 cut(s) 740, 879
CviAII CATG 4 cut(s) 290, 524, 698, 854
CviQI GTAC 2 cut(s) 740, 879
DdeI CTNAG 5 cut(s) 72, 366, 642, 778, 859
DpnI GATC 1 cut(s) 615
DpnII GATC 1 cut(s) 613
DraIII CACNNNGTG 1 cut(s) 292
EaeI YGGCCR 2 cut(s) 334, 589
EciI GGCGGA 1 cut(s) 800
Eco130I CCWWGG 1 cut(s) 826
Eco147I AGGCCT 1 cut(s) 175
Eco24I GRGCYC 1 cut(s) 299
Eco32I GATATC 1 cut(s) 20
Eco47I GGWCC 1 cut(s) 53
Eco88I CYCGRG 1 cut(s) 263
EcoRII CCWGG 3 cut(s) 375, 510, 616
EcoRV GATATC 1 cut(s) 20
EcoT14I CCWWGG 1 cut(s) 826
EcoT22I ATGCAT 1 cut(s) 852
EcoT38I GRGCYC 1 cut(s) 299
ErhI CCWWGG 1 cut(s) 826
FaeI CATG 4 cut(s) 293, 527, 701, 857
FaqI GGGAC 2 cut(s) 174, 331
FatI CATG 4 cut(s) 289, 523, 697, 853
FblI GTMKAC 1 cut(s) 238
Fnu4HI GCNGC 1 cut(s) 469
FokI GGATG 2 cut(s) 844, 859
FriOI GRGCYC 1 cut(s) 299
Fsp4HI GCNGC 1 cut(s) 469
FspBI CTAG 9 cut(s) 15, 57, 87, 138, 177, 216, 396, 432, 827
GluI GCNGC 1 cut(s) 469
GsaI CCCAGC 1 cut(s) 538
GsuI CTGGAG 1 cut(s) 639
HaeIII GGCC 7 cut(s) 67, 121, 175, 297, 336, 515, 591
HapII CCGG 2 cut(s) 479, 899
HgaI GACGC 2 cut(s) 171, 488
Hin1I GRCGYC 1 cut(s) 499
Hin1II CATG 4 cut(s) 293, 527, 701, 857
HincII GTYRAC 1 cut(s) 372
HindII GTYRAC 1 cut(s) 372
HinfI GANTC 5 cut(s) 134, 247, 381, 793, 895
HpaII CCGG 2 cut(s) 479, 899
HphI GGTGA 2 cut(s) 907, 938
Hpy166II GTNNAC 4 cut(s) 239, 372, 488, 929
Hpy188I TCNGA 7 cut(s) 133, 252, 402, 414, 689, 846, 894
Hpy188III TCNNGA 4 cut(s) 23, 33, 169, 263
Hpy8I GTNNAC 4 cut(s) 239, 372, 488, 929
HpyAV CCTTC 2 cut(s) 761, 851
HpyCH4III ACNGT 3 cut(s) 29, 198, 883
HpyCH4IV ACGT 1 cut(s) 561
HpyCH4V TGCA 3 cut(s) 101, 554, 850
HpyF10VI GCNNNNNNNGC 1 cut(s) 468
HpyF3I CTNAG 5 cut(s) 72, 366, 642, 778, 859
HpySE526I ACGT 1 cut(s) 561
Hsp92I GRCGYC 1 cut(s) 499
Hsp92II CATG 4 cut(s) 293, 527, 701, 857
Kzo9I GATC 1 cut(s) 613
LmnI GCTCC 2 cut(s) 465, 620
Lsp1109I GCAGC 1 cut(s) 480
LweI GCATC 3 cut(s) 110, 837, 859
MaeI CTAG 9 cut(s) 15, 57, 87, 138, 177, 216, 396, 432, 827
MaeII ACGT 1 cut(s) 561
MaeIII GTNAC 4 cut(s) 323, 344, 505, 913
MalI GATC 1 cut(s) 615
MboI GATC 1 cut(s) 613
MboII GAAGA 2 cut(s) 376, 512
MhlI GDGCHC 2 cut(s) 299, 672
MlsI TGGCCA 2 cut(s) 336, 591
MluCI AATT 2 cut(s) 78, 729
MluNI TGGCCA 2 cut(s) 336, 591
MlyI GAGTC 2 cut(s) 390, 904
Mox20I TGGCCA 2 cut(s) 336, 591
Mph1103I ATGCAT 1 cut(s) 852
MscI TGGCCA 2 cut(s) 336, 591
Msp20I TGGCCA 2 cut(s) 336, 591
MspI CCGG 2 cut(s) 479, 899
MspR9I CCNGG 5 cut(s) 377, 480, 512, 618, 900
Mva1269I GAATGC 1 cut(s) 365
MvaI CCWGG 3 cut(s) 377, 512, 618
MwoI GCNNNNNNNGC 1 cut(s) 468
NciI CCSGG 2 cut(s) 480, 900
NdeII GATC 1 cut(s) 613
NlaIII CATG 4 cut(s) 293, 527, 701, 857
NlaIV GGNNCC 5 cut(s) 31, 66, 287, 297, 622
NmeAIII GCCGAG 1 cut(s) 147
NmuCI GTSAC 3 cut(s) 344, 505, 913
NsiI ATGCAT 1 cut(s) 852
NspI RCATGY 1 cut(s) 701
PaqCI CACCTGC 1 cut(s) 299
PasI CCCWGGG 1 cut(s) 376
PceI AGGCCT 1 cut(s) 175
PctI GAATGC 1 cut(s) 365
PfeI GAWTC 3 cut(s) 134, 247, 793
PfoI TCCNGGA 1 cut(s) 616
PkrI GCNGC 1 cut(s) 470
PleI GAGTC 2 cut(s) 389, 903
PpsI GAGTC 2 cut(s) 389, 903
Psp6I CCWGG 3 cut(s) 375, 510, 616
PspFI CCCAGC 1 cut(s) 534
PspGI CCWGG 3 cut(s) 375, 510, 616
PspN4I GGNNCC 5 cut(s) 31, 66, 287, 297, 622
PspOMI GGGCCC 1 cut(s) 295
PspPI GGNCC 5 cut(s) 53, 65, 295, 296, 514
RsaI GTAC 2 cut(s) 741, 880
RsaNI GTAC 2 cut(s) 740, 879
SatI GCNGC 1 cut(s) 469
Sau3AI GATC 1 cut(s) 613
Sau96I GGNCC 5 cut(s) 53, 65, 295, 296, 514
ScaI AGTACT 1 cut(s) 880
SchI GAGTC 2 cut(s) 390, 904
ScrFI CCNGG 5 cut(s) 377, 480, 512, 618, 900
SduI GDGCHC 2 cut(s) 299, 672
SfaNI GCATC 3 cut(s) 110, 837, 859
SfcI CTRYAG 1 cut(s) 349
SinI GGWCC 1 cut(s) 53
SpeI ACTAGT 2 cut(s) 395, 431
Sse9I AATT 2 cut(s) 78, 729
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 2 cut(s) 51, 785
SspMI CTAG 9 cut(s) 15, 57, 87, 138, 177, 216, 396, 432, 827
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 5 cut(s) 375, 478, 510, 616, 898
StyI CCWWGG 1 cut(s) 826
TaaI ACNGT 3 cut(s) 29, 198, 883
TaiI ACGT 1 cut(s) 564
TasI AATT 2 cut(s) 78, 729
TatI WGTACW 1 cut(s) 878
TfiI GAWTC 3 cut(s) 134, 247, 793
TscAI CASTG 6 cut(s) 217, 229, 335, 344, 510, 556
TseFI GTSAC 3 cut(s) 344, 505, 913
TseI GCWGC 1 cut(s) 468
Tsp45I GTSAC 3 cut(s) 344, 505, 913
TspDTI ATGAA 1 cut(s) 512
TspRI CASTG 6 cut(s) 217, 229, 335, 344, 510, 556
VpaK11BI GGWCC 1 cut(s) 53
XceI RCATGY 1 cut(s) 701
XmaJI CCTAGG 1 cut(s) 826
XmiI GTMKAC 1 cut(s) 238
XspI CTAG 9 cut(s) 15, 57, 87, 138, 177, 216, 396, 432, 827
ZrmI AGTACT 1 cut(s) 880
Zsp2I ATGCAT 1 cut(s) 852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.