transposition, RNA-mediated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SH3_Tf2-1 | PF24626 | 97 - 161 | 1.3e-28 | Tf2-1-like, SH3 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 165, 332 |
| AccBSI | CCGCTC | 1 cut(s) | 394 |
| AccI | GTMKAC | 1 cut(s) | 238 |
| AciI | CCGC | 2 cut(s) | 47, 394 |
| AcsI | RAATTY | 1 cut(s) | 535 |
| AdeI | CACNNNGTG | 1 cut(s) | 640 |
| AfaI | GTAC | 3 cut(s) | 34, 447, 482 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 323 |
| AflIII | ACRYGT | 1 cut(s) | 93 |
| AgeI | ACCGGT | 1 cut(s) | 556 |
| AgsI | TTSAA | 4 cut(s) | 80, 121, 284, 307 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 504, 536 |
| AluBI | AGCT | 3 cut(s) | 104, 310, 650 |
| AluI | AGCT | 3 cut(s) | 104, 310, 650 |
| Alw26I | GTCTC | 4 cut(s) | 27, 318, 427, 469 |
| AoxI | GGCC | 1 cut(s) | 374 |
| ApoI | RAATTY | 1 cut(s) | 535 |
| AsiGI | ACCGGT | 1 cut(s) | 556 |
| AspS9I | GGNCC | 2 cut(s) | 72, 374 |
| AsuHPI | GGTGA | 2 cut(s) | 302, 683 |
| AvaII | GGWCC | 1 cut(s) | 72 |
| BaeGI | GKGCMC | 1 cut(s) | 17 |
| BbsI | GAAGAC | 1 cut(s) | 96 |
| BccI | CCATC | 1 cut(s) | 50 |
| BceAI | ACGGC | 1 cut(s) | 243 |
| BciVI | GTATCC | 1 cut(s) | 696 |
| BcoDI | GTCTC | 4 cut(s) | 27, 318, 427, 469 |
| BfaI | CTAG | 2 cut(s) | 441, 703 |
| BfuI | GTATCC | 1 cut(s) | 696 |
| BmcAI | AGTACT | 1 cut(s) | 34 |
| Bme18I | GGWCC | 1 cut(s) | 72 |
| BmgT120I | GGNCC | 2 cut(s) | 72, 374 |
| BmiI | GGNNCC | 2 cut(s) | 198, 660 |
| BmrI | ACTGGG | 1 cut(s) | 304 |
| BmuI | ACTGGG | 1 cut(s) | 304 |
| BpiI | GAAGAC | 1 cut(s) | 96 |
| BpmI | CTGGAG | 1 cut(s) | 166 |
| BsaJI | CCNNGG | 2 cut(s) | 317, 609 |
| BsaWI | WCCGGW | 1 cut(s) | 556 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 323 |
| Bse118I | RCCGGY | 1 cut(s) | 556 |
| Bse1I | ACTGG | 2 cut(s) | 90, 299 |
| Bse3DI | GCAATG | 1 cut(s) | 483 |
| BseDI | CCNNGG | 2 cut(s) | 317, 609 |
| BseGI | GGATG | 1 cut(s) | 43 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 323 |
| BseMI | GCAATG | 1 cut(s) | 483 |
| BseMII | CTCAG | 3 cut(s) | 32, 38, 604 |
| BseNI | ACTGG | 2 cut(s) | 90, 299 |
| BseRI | GAGGAG | 1 cut(s) | 680 |
| BseSI | GKGCMC | 1 cut(s) | 17 |
| BsgI | GTGCAG | 1 cut(s) | 423 |
| BshFI | GGCC | 1 cut(s) | 376 |
| BshTI | ACCGGT | 1 cut(s) | 556 |
| BsiSI | CCGG | 1 cut(s) | 557 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 323 |
| BsmAI | GTCTC | 4 cut(s) | 27, 318, 427, 469 |
| BsnI | GGCC | 1 cut(s) | 376 |
| Bsp1286I | GDGCHC | 1 cut(s) | 17 |
| Bsp143I | GATC | 1 cut(s) | 384 |
| BspACI | CCGC | 2 cut(s) | 47, 394 |
| BspANI | GGCC | 1 cut(s) | 376 |
| BspCNI | CTCAG | 3 cut(s) | 31, 37, 603 |
| BspLI | GGNNCC | 2 cut(s) | 198, 660 |
| BsrBI | CCGCTC | 1 cut(s) | 394 |
| BsrDI | GCAATG | 1 cut(s) | 483 |
| BsrFI | RCCGGY | 1 cut(s) | 556 |
| BsrI | ACTGG | 2 cut(s) | 90, 299 |
| BssAI | RCCGGY | 1 cut(s) | 556 |
| BssECI | CCNNGG | 2 cut(s) | 317, 609 |
| BssMI | GATC | 1 cut(s) | 384 |
| BssT1I | CCWWGG | 2 cut(s) | 317, 609 |
| Bst4CI | ACNGT | 1 cut(s) | 173 |
| BstDEI | CTNAG | 4 cut(s) | 18, 24, 356, 590 |
| BstF5I | GGATG | 1 cut(s) | 43 |
| BstKTI | GATC | 1 cut(s) | 387 |
| BstMAI | GTCTC | 4 cut(s) | 27, 318, 427, 469 |
| BstMBI | GATC | 1 cut(s) | 384 |
| BstNSI | RCATGY | 1 cut(s) | 97 |
| BstSLI | GKGCMC | 1 cut(s) | 17 |
| BstV2I | GAAGAC | 1 cut(s) | 96 |
| BsuI | GTATCC | 1 cut(s) | 696 |
| BsuRI | GGCC | 1 cut(s) | 376 |
| BtsCI | GGATG | 1 cut(s) | 43 |
| BtsIMutI | CAGTG | 1 cut(s) | 83 |
| Cfr10I | RCCGGY | 1 cut(s) | 556 |
| Cfr13I | GGNCC | 2 cut(s) | 72, 374 |
| Csp6I | GTAC | 3 cut(s) | 33, 446, 481 |
| CspAI | ACCGGT | 1 cut(s) | 556 |
| CviAII | CATG | 7 cut(s) | 94, 140, 449, 461, 469, 500, 637 |
| CviQI | GTAC | 3 cut(s) | 33, 446, 481 |
| DdeI | CTNAG | 4 cut(s) | 18, 24, 356, 590 |
| DpnI | GATC | 1 cut(s) | 386 |
| DpnII | GATC | 1 cut(s) | 384 |
| DraIII | CACNNNGTG | 1 cut(s) | 640 |
| Eco130I | CCWWGG | 2 cut(s) | 317, 609 |
| Eco47I | GGWCC | 1 cut(s) | 72 |
| EcoT14I | CCWWGG | 2 cut(s) | 317, 609 |
| ErhI | CCWWGG | 2 cut(s) | 317, 609 |
| FaeI | CATG | 7 cut(s) | 97, 143, 452, 464, 472, 503, 640 |
| FatI | CATG | 7 cut(s) | 93, 139, 448, 460, 468, 499, 636 |
| FauNDI | CATATG | 2 cut(s) | 379, 544 |
| FblI | GTMKAC | 1 cut(s) | 238 |
| FokI | GGATG | 1 cut(s) | 30 |
| FspBI | CTAG | 2 cut(s) | 441, 703 |
| GsuI | CTGGAG | 1 cut(s) | 166 |
| HaeIII | GGCC | 1 cut(s) | 376 |
| HapII | CCGG | 1 cut(s) | 557 |
| Hin1II | CATG | 7 cut(s) | 97, 143, 452, 464, 472, 503, 640 |
| HinfI | GANTC | 1 cut(s) | 491 |
| HpaII | CCGG | 1 cut(s) | 557 |
| HphI | GGTGA | 2 cut(s) | 302, 683 |
| Hpy166II | GTNNAC | 1 cut(s) | 239 |
| Hpy188I | TCNGA | 4 cut(s) | 432, 524, 564, 593 |
| Hpy188III | TCNNGA | 2 cut(s) | 304, 441 |
| Hpy8I | GTNNAC | 1 cut(s) | 239 |
| HpyAV | CCTTC | 1 cut(s) | 316 |
| HpyCH4III | ACNGT | 1 cut(s) | 173 |
| HpyCH4V | TGCA | 3 cut(s) | 38, 146, 404 |
| HpyF3I | CTNAG | 4 cut(s) | 18, 24, 356, 590 |
| Hsp92II | CATG | 7 cut(s) | 97, 143, 452, 464, 472, 503, 640 |
| Kzo9I | GATC | 1 cut(s) | 384 |
| LmnI | GCTCC | 4 cut(s) | 202, 391, 580, 667 |
| LpnPI | CCDG | 5 cut(s) | 71, 196, 280, 570, 675 |
| MaeI | CTAG | 2 cut(s) | 441, 703 |
| MaeIII | GTNAC | 1 cut(s) | 290 |
| MalI | GATC | 1 cut(s) | 386 |
| MbiI | CCGCTC | 1 cut(s) | 394 |
| MboI | GATC | 1 cut(s) | 384 |
| MboII | GAAGA | 3 cut(s) | 101, 276, 560 |
| MhlI | GDGCHC | 1 cut(s) | 17 |
| MluCI | AATT | 3 cut(s) | 116, 127, 535 |
| MnlI | CCTC | 8 cut(s) | 341, 372, 438, 505, 570, 637, 658, 699 |
| MslI | CAYNNNNRTG | 1 cut(s) | 191 |
| MspI | CCGG | 1 cut(s) | 557 |
| NdeI | CATATG | 2 cut(s) | 379, 544 |
| NdeII | GATC | 1 cut(s) | 384 |
| NlaIII | CATG | 7 cut(s) | 97, 143, 452, 464, 472, 503, 640 |
| NlaIV | GGNNCC | 2 cut(s) | 198, 660 |
| NmuCI | GTSAC | 1 cut(s) | 290 |
| NspI | RCATGY | 1 cut(s) | 97 |
| PciI | ACATGT | 1 cut(s) | 93 |
| PfeI | GAWTC | 1 cut(s) | 491 |
| PinAI | ACCGGT | 1 cut(s) | 556 |
| PscI | ACATGT | 1 cut(s) | 93 |
| PsiI | TTATAA | 2 cut(s) | 165, 332 |
| PspN4I | GGNNCC | 2 cut(s) | 198, 660 |
| PspPI | GGNCC | 2 cut(s) | 72, 374 |
| RsaI | GTAC | 3 cut(s) | 34, 447, 482 |
| RsaNI | GTAC | 3 cut(s) | 33, 446, 481 |
| RseI | CAYNNNNRTG | 1 cut(s) | 191 |
| Sau3AI | GATC | 1 cut(s) | 384 |
| Sau96I | GGNCC | 2 cut(s) | 72, 374 |
| ScaI | AGTACT | 1 cut(s) | 34 |
| SduI | GDGCHC | 1 cut(s) | 17 |
| SetI | ASST | 7 cut(s) | 106, 312, 430, 520, 621, 652, 696 |
| SinI | GGWCC | 1 cut(s) | 72 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 191 |
| Sse9I | AATT | 3 cut(s) | 116, 127, 535 |
| SsiI | CCGC | 2 cut(s) | 47, 394 |
| SspMI | CTAG | 2 cut(s) | 441, 703 |
| StyI | CCWWGG | 2 cut(s) | 317, 609 |
| TaaI | ACNGT | 1 cut(s) | 173 |
| TaqI | TCGA | 1 cut(s) | 364 |
| TasI | AATT | 3 cut(s) | 116, 127, 535 |
| TatI | WGTACW | 3 cut(s) | 32, 445, 480 |
| TfiI | GAWTC | 1 cut(s) | 491 |
| TscAI | CASTG | 1 cut(s) | 90 |
| TseFI | GTSAC | 1 cut(s) | 290 |
| Tsp45I | GTSAC | 1 cut(s) | 290 |
| TspDTI | ATGAA | 4 cut(s) | 32, 219, 449, 561 |
| TspGWI | ACGGA | 2 cut(s) | 80, 404 |
| TspRI | CASTG | 1 cut(s) | 90 |
| VpaK11BI | GGWCC | 1 cut(s) | 72 |
| XapI | RAATTY | 1 cut(s) | 535 |
| XbaI | TCTAGA | 1 cut(s) | 440 |
| XceI | RCATGY | 1 cut(s) | 97 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 82, 190 |
| XmiI | GTMKAC | 1 cut(s) | 238 |
| XspI | CTAG | 2 cut(s) | 441, 703 |
| ZrmI | AGTACT | 1 cut(s) | 34 |