gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 246 |
| AccI | GTMKAC | 1 cut(s) | 647 |
| AccII | CGCG | 1 cut(s) | 255 |
| AccIII | TCCGGA | 1 cut(s) | 279 |
| AciI | CCGC | 2 cut(s) | 126, 244 |
| AclI | AACGTT | 1 cut(s) | 579 |
| AclWI | GGATC | 2 cut(s) | 136, 189 |
| AcsI | RAATTY | 2 cut(s) | 355, 602 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 207 |
| AluBI | AGCT | 3 cut(s) | 216, 448, 658 |
| AluI | AGCT | 3 cut(s) | 216, 448, 658 |
| Alw21I | GWGCWC | 1 cut(s) | 660 |
| Alw26I | GTCTC | 3 cut(s) | 481, 596, 680 |
| AlwI | GGATC | 2 cut(s) | 136, 189 |
| Aor13HI | TCCGGA | 1 cut(s) | 279 |
| ApeKI | GCWGC | 1 cut(s) | 550 |
| ApoI | RAATTY | 2 cut(s) | 355, 602 |
| AseI | ATTAAT | 1 cut(s) | 498 |
| AspLEI | GCGC | 1 cut(s) | 532 |
| AspS9I | GGNCC | 1 cut(s) | 241 |
| AsuII | TTCGAA | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 241 |
| AxyI | CCTNAGG | 1 cut(s) | 222 |
| BanII | GRGCYC | 1 cut(s) | 660 |
| Bbv12I | GWGCWC | 1 cut(s) | 660 |
| BbvI | GCAGC | 1 cut(s) | 537 |
| BccI | CCATC | 1 cut(s) | 618 |
| BciVI | GTATCC | 2 cut(s) | 14, 74 |
| BcoDI | GTCTC | 3 cut(s) | 481, 596, 680 |
| BfaI | CTAG | 1 cut(s) | 90 |
| BfuI | GTATCC | 2 cut(s) | 14, 74 |
| BisI | GCNGC | 1 cut(s) | 551 |
| BlpI | GCTNAGC | 1 cut(s) | 122 |
| BlsI | GCNGC | 1 cut(s) | 552 |
| Bme18I | GGWCC | 1 cut(s) | 241 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 207 |
| BmgT120I | GGNCC | 1 cut(s) | 241 |
| BmiI | GGNNCC | 1 cut(s) | 242 |
| BmrI | ACTGGG | 1 cut(s) | 642 |
| BmsI | GCATC | 1 cut(s) | 108 |
| BmuI | ACTGGG | 1 cut(s) | 642 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 122 |
| Bpu14I | TTCGAA | 1 cut(s) | 98 |
| BpuEI | CTTGAG | 1 cut(s) | 215 |
| BsaBI | GATNNNNATC | 2 cut(s) | 85, 186 |
| BsaJI | CCNNGG | 1 cut(s) | 469 |
| BsaWI | WCCGGW | 1 cut(s) | 279 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 629, 659 |
| Bse1I | ACTGG | 2 cut(s) | 345, 637 |
| Bse21I | CCTNAGG | 1 cut(s) | 222 |
| Bse3DI | GCAATG | 1 cut(s) | 554 |
| Bse8I | GATNNNNATC | 2 cut(s) | 85, 186 |
| BseAI | TCCGGA | 1 cut(s) | 279 |
| BseDI | CCNNGG | 1 cut(s) | 469 |
| BseGI | GGATG | 1 cut(s) | 465 |
| BseJI | GATNNNNATC | 2 cut(s) | 85, 186 |
| BseMI | GCAATG | 1 cut(s) | 554 |
| BseNI | ACTGG | 2 cut(s) | 345, 637 |
| BseXI | GCAGC | 1 cut(s) | 537 |
| BsgI | GTGCAG | 1 cut(s) | 558 |
| Bsh1236I | CGCG | 1 cut(s) | 255 |
| BsiHKAI | GWGCWC | 1 cut(s) | 660 |
| BsiSI | CCGG | 1 cut(s) | 280 |
| BslFI | GGGAC | 1 cut(s) | 254 |
| BsmAI | GTCTC | 3 cut(s) | 481, 596, 680 |
| BsmFI | GGGAC | 1 cut(s) | 254 |
| Bsp119I | TTCGAA | 1 cut(s) | 98 |
| Bsp1286I | GDGCHC | 1 cut(s) | 660 |
| Bsp13I | TCCGGA | 1 cut(s) | 279 |
| Bsp143I | GATC | 3 cut(s) | 128, 181, 187 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 122 |
| BspACI | CCGC | 2 cut(s) | 126, 244 |
| BspEI | TCCGGA | 1 cut(s) | 279 |
| BspFNI | CGCG | 1 cut(s) | 255 |
| BspHI | TCATGA | 1 cut(s) | 198 |
| BspLI | GGNNCC | 1 cut(s) | 242 |
| BspPI | GGATC | 2 cut(s) | 136, 189 |
| BspT104I | TTCGAA | 1 cut(s) | 98 |
| BsrBI | CCGCTC | 1 cut(s) | 246 |
| BsrDI | GCAATG | 1 cut(s) | 554 |
| BsrI | ACTGG | 2 cut(s) | 345, 637 |
| BssECI | CCNNGG | 1 cut(s) | 469 |
| BssMI | GATC | 3 cut(s) | 128, 181, 187 |
| Bst4CI | ACNGT | 2 cut(s) | 587, 620 |
| Bst6I | CTCTTC | 2 cut(s) | 369, 678 |
| BstBI | TTCGAA | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 1 cut(s) | 399 |
| BstDEI | CTNAG | 2 cut(s) | 122, 222 |
| BstF5I | GGATG | 1 cut(s) | 465 |
| BstFNI | CGCG | 1 cut(s) | 255 |
| BstHHI | GCGC | 1 cut(s) | 532 |
| BstKTI | GATC | 3 cut(s) | 131, 184, 190 |
| BstMAI | GTCTC | 3 cut(s) | 481, 596, 680 |
| BstMBI | GATC | 3 cut(s) | 128, 181, 187 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 252, 536, 556, 713 |
| BstUI | CGCG | 1 cut(s) | 255 |
| BstV1I | GCAGC | 1 cut(s) | 537 |
| BstX2I | RGATCY | 1 cut(s) | 181 |
| BstYI | RGATCY | 1 cut(s) | 181 |
| Bsu36I | CCTNAGG | 1 cut(s) | 222 |
| BsuI | GTATCC | 2 cut(s) | 14, 74 |
| BtsCI | GGATG | 1 cut(s) | 465 |
| BtsIMutI | CAGTG | 1 cut(s) | 630 |
| Cac8I | GCNNGC | 1 cut(s) | 399 |
| CciI | TCATGA | 1 cut(s) | 198 |
| CfoI | GCGC | 1 cut(s) | 532 |
| Cfr13I | GGNCC | 1 cut(s) | 241 |
| CseI | GACGC | 2 cut(s) | 58, 197 |
| CviAII | CATG | 3 cut(s) | 199, 520, 676 |
| CviJI | RGCY | 4 cut(s) | 216, 448, 570, 658 |
| CviKI_1 | RGCY | 4 cut(s) | 216, 448, 570, 658 |
| DdeI | CTNAG | 2 cut(s) | 122, 222 |
| DpnI | GATC | 3 cut(s) | 130, 183, 189 |
| DpnII | GATC | 3 cut(s) | 128, 181, 187 |
| DriI | GACNNNNNGTC | 1 cut(s) | 207 |
| Eam1104I | CTCTTC | 2 cut(s) | 369, 678 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 207 |
| EarI | CTCTTC | 2 cut(s) | 369, 678 |
| Ecl136II | GAGCTC | 1 cut(s) | 658 |
| Eco24I | GRGCYC | 1 cut(s) | 660 |
| Eco47I | GGWCC | 1 cut(s) | 241 |
| Eco53kI | GAGCTC | 1 cut(s) | 658 |
| Eco81I | CCTNAGG | 1 cut(s) | 222 |
| EcoICRI | GAGCTC | 1 cut(s) | 658 |
| EcoT38I | GRGCYC | 1 cut(s) | 660 |
| FaeI | CATG | 3 cut(s) | 202, 523, 679 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 324, 356 |
| FaqI | GGGAC | 1 cut(s) | 254 |
| FatI | CATG | 3 cut(s) | 198, 519, 675 |
| FblI | GTMKAC | 1 cut(s) | 647 |
| Fnu4HI | GCNGC | 1 cut(s) | 551 |
| FokI | GGATG | 1 cut(s) | 472 |
| FriOI | GRGCYC | 1 cut(s) | 660 |
| Fsp4HI | GCNGC | 1 cut(s) | 551 |
| FspBI | CTAG | 1 cut(s) | 90 |
| GlaI | GCGC | 1 cut(s) | 531 |
| GluI | GCNGC | 1 cut(s) | 551 |
| HapII | CCGG | 1 cut(s) | 280 |
| HgaI | GACGC | 2 cut(s) | 58, 197 |
| HhaI | GCGC | 1 cut(s) | 532 |
| Hin1II | CATG | 3 cut(s) | 202, 523, 679 |
| Hin6I | GCGC | 1 cut(s) | 530 |
| HinP1I | GCGC | 1 cut(s) | 530 |
| HinfI | GANTC | 2 cut(s) | 107, 283 |
| HpaII | CCGG | 1 cut(s) | 280 |
| Hpy166II | GTNNAC | 3 cut(s) | 31, 583, 648 |
| Hpy188I | TCNGA | 2 cut(s) | 48, 142 |
| Hpy188III | TCNNGA | 6 cut(s) | 115, 185, 199, 280, 311, 593 |
| Hpy8I | GTNNAC | 3 cut(s) | 31, 583, 648 |
| HpyAV | CCTTC | 1 cut(s) | 590 |
| HpyCH4III | ACNGT | 2 cut(s) | 587, 620 |
| HpyCH4IV | ACGT | 1 cut(s) | 579 |
| HpyCH4V | TGCA | 5 cut(s) | 329, 397, 539, 559, 707 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 252, 536, 556, 713 |
| HpyF3I | CTNAG | 2 cut(s) | 122, 222 |
| HpySE526I | ACGT | 1 cut(s) | 579 |
| Hsp92II | CATG | 3 cut(s) | 202, 523, 679 |
| HspAI | GCGC | 1 cut(s) | 530 |
| Kpn2I | TCCGGA | 1 cut(s) | 279 |
| Kzo9I | GATC | 3 cut(s) | 128, 181, 187 |
| LmnI | GCTCC | 1 cut(s) | 445 |
| LpnPI | CCDG | 4 cut(s) | 293, 324, 358, 618 |
| Lsp1109I | GCAGC | 1 cut(s) | 537 |
| LweI | GCATC | 1 cut(s) | 108 |
| MaeI | CTAG | 1 cut(s) | 90 |
| MaeII | ACGT | 1 cut(s) | 579 |
| MaeIII | GTNAC | 4 cut(s) | 159, 319, 419, 671 |
| MalI | GATC | 3 cut(s) | 130, 183, 189 |
| MbiI | CCGCTC | 1 cut(s) | 246 |
| MboI | GATC | 3 cut(s) | 128, 181, 187 |
| MboII | GAAGA | 3 cut(s) | 386, 692, 695 |
| MflI | RGATCY | 1 cut(s) | 181 |
| MhlI | GDGCHC | 1 cut(s) | 660 |
| MluCI | AATT | 3 cut(s) | 355, 602, 702 |
| MnlI | CCTC | 6 cut(s) | 179, 206, 370, 421, 450, 479 |
| MroI | TCCGGA | 1 cut(s) | 279 |
| MseI | TTAA | 5 cut(s) | 35, 498, 573, 609, 692 |
| MspI | CCGG | 1 cut(s) | 280 |
| MvnI | CGCG | 1 cut(s) | 255 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 252, 536, 556, 713 |
| NdeII | GATC | 3 cut(s) | 128, 181, 187 |
| NlaIII | CATG | 3 cut(s) | 202, 523, 679 |
| NlaIV | GGNNCC | 1 cut(s) | 242 |
| NmuCI | GTSAC | 1 cut(s) | 671 |
| NspV | TTCGAA | 1 cut(s) | 98 |
| PagI | TCATGA | 1 cut(s) | 198 |
| PfeI | GAWTC | 2 cut(s) | 107, 283 |
| PkrI | GCNGC | 1 cut(s) | 552 |
| PshBI | ATTAAT | 1 cut(s) | 498 |
| Psp124BI | GAGCTC | 1 cut(s) | 660 |
| Psp1406I | AACGTT | 1 cut(s) | 579 |
| PspN4I | GGNNCC | 1 cut(s) | 242 |
| PspPI | GGNCC | 1 cut(s) | 241 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 144, 176 |
| PsuI | RGATCY | 1 cut(s) | 181 |
| SacI | GAGCTC | 1 cut(s) | 660 |
| SaqAI | TTAA | 5 cut(s) | 35, 498, 573, 609, 692 |
| SatI | GCNGC | 1 cut(s) | 551 |
| Sau3AI | GATC | 3 cut(s) | 128, 181, 187 |
| Sau96I | GGNCC | 1 cut(s) | 241 |
| SduI | GDGCHC | 1 cut(s) | 660 |
| SetI | ASST | 4 cut(s) | 218, 450, 582, 660 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SfuI | TTCGAA | 1 cut(s) | 98 |
| SinI | GGWCC | 1 cut(s) | 241 |
| SmlI | CTYRAG | 1 cut(s) | 230 |
| SmoI | CTYRAG | 1 cut(s) | 230 |
| Sse9I | AATT | 3 cut(s) | 355, 602, 702 |
| SsiI | CCGC | 2 cut(s) | 126, 244 |
| SspI | AATATT | 1 cut(s) | 505 |
| SspMI | CTAG | 1 cut(s) | 90 |
| SstI | GAGCTC | 1 cut(s) | 660 |
| TaaI | ACNGT | 2 cut(s) | 587, 620 |
| TaiI | ACGT | 1 cut(s) | 582 |
| TaqI | TCGA | 4 cut(s) | 98, 105, 413, 594 |
| TasI | AATT | 3 cut(s) | 355, 602, 702 |
| TfiI | GAWTC | 2 cut(s) | 107, 283 |
| Tru1I | TTAA | 5 cut(s) | 35, 498, 573, 609, 692 |
| Tru9I | TTAA | 5 cut(s) | 35, 498, 573, 609, 692 |
| TscAI | CASTG | 1 cut(s) | 637 |
| TseFI | GTSAC | 1 cut(s) | 671 |
| TseI | GCWGC | 1 cut(s) | 550 |
| Tsp45I | GTSAC | 1 cut(s) | 671 |
| TspDTI | ATGAA | 5 cut(s) | 287, 387, 476, 627, 726 |
| TspGWI | ACGGA | 1 cut(s) | 713 |
| TspRI | CASTG | 1 cut(s) | 637 |
| VpaK11BI | GGWCC | 1 cut(s) | 241 |
| VspI | ATTAAT | 1 cut(s) | 498 |
| XapI | RAATTY | 2 cut(s) | 355, 602 |
| XmiI | GTMKAC | 1 cut(s) | 647 |
| XspI | CTAG | 1 cut(s) | 90 |