gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 425 |
| AcsI | RAATTY | 3 cut(s) | 63, 322, 341 |
| AfaI | GTAC | 3 cut(s) | 133, 444, 448 |
| AgsI | TTSAA | 4 cut(s) | 17, 322, 340, 379 |
| AluBI | AGCT | 5 cut(s) | 95, 140, 206, 251, 428 |
| AluI | AGCT | 5 cut(s) | 95, 140, 206, 251, 428 |
| Alw26I | GTCTC | 1 cut(s) | 469 |
| AlwI | GGATC | 1 cut(s) | 425 |
| ApoI | RAATTY | 3 cut(s) | 63, 322, 341 |
| BccI | CCATC | 1 cut(s) | 341 |
| BcoDI | GTCTC | 1 cut(s) | 469 |
| BfaI | CTAG | 4 cut(s) | 59, 71, 135, 440 |
| BfmI | CTRYAG | 3 cut(s) | 252, 270, 423 |
| BmcAI | AGTACT | 1 cut(s) | 133 |
| BpuEI | CTTGAG | 1 cut(s) | 284 |
| BsaAI | YACGTR | 1 cut(s) | 446 |
| Bse1I | ACTGG | 3 cut(s) | 31, 113, 129 |
| Bse3DI | GCAATG | 1 cut(s) | 370 |
| BseMI | GCAATG | 1 cut(s) | 370 |
| BseMII | CTCAG | 1 cut(s) | 112 |
| BseNI | ACTGG | 3 cut(s) | 31, 113, 129 |
| BseRI | GAGGAG | 2 cut(s) | 290, 463 |
| BsmAI | GTCTC | 1 cut(s) | 469 |
| Bsp143I | GATC | 2 cut(s) | 430, 454 |
| BspCNI | CTCAG | 1 cut(s) | 111 |
| BspPI | GGATC | 1 cut(s) | 425 |
| BsrDI | GCAATG | 1 cut(s) | 370 |
| BsrI | ACTGG | 3 cut(s) | 31, 113, 129 |
| BssMI | GATC | 2 cut(s) | 430, 454 |
| Bst4CI | ACNGT | 1 cut(s) | 240 |
| BstBAI | YACGTR | 1 cut(s) | 446 |
| BstDEI | CTNAG | 3 cut(s) | 91, 98, 475 |
| BstKTI | GATC | 2 cut(s) | 433, 457 |
| BstMAI | GTCTC | 1 cut(s) | 469 |
| BstMBI | GATC | 2 cut(s) | 430, 454 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 308 |
| BstSFI | CTRYAG | 3 cut(s) | 252, 270, 423 |
| BstSNI | TACGTA | 1 cut(s) | 446 |
| BtsIMutI | CAGTG | 1 cut(s) | 236 |
| Csp6I | GTAC | 3 cut(s) | 132, 443, 447 |
| CviAII | CATG | 1 cut(s) | 452 |
| CviJI | RGCY | 9 cut(s) | 95, 140, 186, 206, 251, 269, 302, 395, 428 |
| CviKI_1 | RGCY | 9 cut(s) | 95, 140, 186, 206, 251, 269, 302, 395, 428 |
| CviQI | GTAC | 3 cut(s) | 132, 443, 447 |
| DdeI | CTNAG | 3 cut(s) | 91, 98, 475 |
| DpnI | GATC | 2 cut(s) | 432, 456 |
| DpnII | GATC | 2 cut(s) | 430, 454 |
| Eco105I | TACGTA | 1 cut(s) | 446 |
| EcoRI | GAATTC | 1 cut(s) | 322 |
| FaeI | CATG | 1 cut(s) | 455 |
| FaiI | YATR | 8 cut(s) | 197, 209, 272, 285, 425, 437, 453, 481 |
| FatI | CATG | 1 cut(s) | 451 |
| FspBI | CTAG | 4 cut(s) | 59, 71, 135, 440 |
| Hin1II | CATG | 1 cut(s) | 455 |
| HinfI | GANTC | 3 cut(s) | 104, 232, 416 |
| Hpy166II | GTNNAC | 1 cut(s) | 449 |
| Hpy188I | TCNGA | 1 cut(s) | 101 |
| Hpy188III | TCNNGA | 3 cut(s) | 108, 263, 458 |
| Hpy8I | GTNNAC | 1 cut(s) | 449 |
| HpyCH4III | ACNGT | 1 cut(s) | 240 |
| HpyCH4IV | ACGT | 1 cut(s) | 445 |
| HpyCH4V | TGCA | 1 cut(s) | 199 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 308 |
| HpyF3I | CTNAG | 3 cut(s) | 91, 98, 475 |
| HpySE526I | ACGT | 1 cut(s) | 445 |
| Hsp92II | CATG | 1 cut(s) | 455 |
| Kzo9I | GATC | 2 cut(s) | 430, 454 |
| LmnI | GCTCC | 1 cut(s) | 367 |
| LpnPI | CCDG | 4 cut(s) | 12, 121, 126, 142 |
| MaeI | CTAG | 4 cut(s) | 59, 71, 135, 440 |
| MaeII | ACGT | 1 cut(s) | 445 |
| MaeIII | GTNAC | 1 cut(s) | 121 |
| MalI | GATC | 2 cut(s) | 432, 456 |
| MboI | GATC | 2 cut(s) | 430, 454 |
| MboII | GAAGA | 2 cut(s) | 61, 391 |
| MluCI | AATT | 5 cut(s) | 34, 63, 192, 322, 341 |
| MlyI | GAGTC | 1 cut(s) | 425 |
| MnlI | CCTC | 6 cut(s) | 17, 221, 259, 268, 430, 481 |
| MseI | TTAA | 1 cut(s) | 39 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 308 |
| NdeII | GATC | 2 cut(s) | 430, 454 |
| NlaIII | CATG | 1 cut(s) | 455 |
| NmuCI | GTSAC | 1 cut(s) | 121 |
| PfeI | GAWTC | 2 cut(s) | 104, 232 |
| PleI | GAGTC | 1 cut(s) | 424 |
| PpsI | GAGTC | 1 cut(s) | 424 |
| Ppu21I | YACGTR | 1 cut(s) | 446 |
| RsaI | GTAC | 3 cut(s) | 133, 444, 448 |
| RsaNI | GTAC | 3 cut(s) | 132, 443, 447 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| Sau3AI | GATC | 2 cut(s) | 430, 454 |
| ScaI | AGTACT | 1 cut(s) | 133 |
| SchI | GAGTC | 1 cut(s) | 425 |
| SfcI | CTRYAG | 3 cut(s) | 252, 270, 423 |
| SmlI | CTYRAG | 1 cut(s) | 263 |
| SmoI | CTYRAG | 1 cut(s) | 263 |
| SnaBI | TACGTA | 1 cut(s) | 446 |
| Sse9I | AATT | 5 cut(s) | 34, 63, 192, 322, 341 |
| SspMI | CTAG | 4 cut(s) | 59, 71, 135, 440 |
| TaaI | ACNGT | 1 cut(s) | 240 |
| TaiI | ACGT | 1 cut(s) | 448 |
| TasI | AATT | 5 cut(s) | 34, 63, 192, 322, 341 |
| TatI | WGTACW | 1 cut(s) | 131 |
| TfiI | GAWTC | 2 cut(s) | 104, 232 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TscAI | CASTG | 1 cut(s) | 243 |
| TseFI | GTSAC | 1 cut(s) | 121 |
| Tsp45I | GTSAC | 1 cut(s) | 121 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 243 |
| XapI | RAATTY | 3 cut(s) | 63, 322, 341 |
| XspI | CTAG | 4 cut(s) | 59, 71, 135, 440 |
| ZrmI | AGTACT | 1 cut(s) | 133 |