gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 212 |
| AcuI | CTGAAG | 1 cut(s) | 188 |
| AdeI | CACNNNGTG | 1 cut(s) | 124 |
| AgsI | TTSAA | 1 cut(s) | 274 |
| AluBI | AGCT | 3 cut(s) | 50, 85, 130 |
| AluI | AGCT | 3 cut(s) | 50, 85, 130 |
| Alw21I | GWGCWC | 1 cut(s) | 120 |
| Ama87I | CYCGRG | 1 cut(s) | 145 |
| ApeKI | GCWGC | 1 cut(s) | 56 |
| AsuHPI | GGTGA | 1 cut(s) | 201 |
| AvaI | CYCGRG | 1 cut(s) | 145 |
| Bbv12I | GWGCWC | 1 cut(s) | 120 |
| BbvCI | CCTCAGC | 2 cut(s) | 51, 152 |
| BbvI | GCAGC | 1 cut(s) | 43 |
| BfaI | CTAG | 1 cut(s) | 60 |
| BisI | GCNGC | 1 cut(s) | 57 |
| BlsI | GCNGC | 1 cut(s) | 58 |
| BmeT110I | CYCGRG | 1 cut(s) | 145 |
| BmrI | ACTGGG | 1 cut(s) | 274 |
| BmuI | ACTGGG | 1 cut(s) | 274 |
| BpmI | CTGGAG | 1 cut(s) | 107 |
| Bpu10I | CCTNAGC | 2 cut(s) | 51, 152 |
| BpuEI | CTTGAG | 1 cut(s) | 237 |
| Bsa29I | ATCGAT | 1 cut(s) | 24 |
| BsaBI | GATNNNNATC | 1 cut(s) | 30 |
| Bse1I | ACTGG | 1 cut(s) | 269 |
| Bse8I | GATNNNNATC | 1 cut(s) | 30 |
| BseCI | ATCGAT | 1 cut(s) | 24 |
| BseJI | GATNNNNATC | 1 cut(s) | 30 |
| BseMII | CTCAG | 4 cut(s) | 42, 143, 197, 224 |
| BseNI | ACTGG | 1 cut(s) | 269 |
| BseXI | GCAGC | 1 cut(s) | 43 |
| BshVI | ATCGAT | 1 cut(s) | 24 |
| BsiHKAI | GWGCWC | 1 cut(s) | 120 |
| BsiHKCI | CYCGRG | 1 cut(s) | 145 |
| BslFI | GGGAC | 1 cut(s) | 281 |
| BsmFI | GGGAC | 1 cut(s) | 281 |
| BsoBI | CYCGRG | 1 cut(s) | 145 |
| Bsp1286I | GDGCHC | 1 cut(s) | 120 |
| BspACI | CCGC | 1 cut(s) | 212 |
| BspCNI | CTCAG | 4 cut(s) | 43, 144, 196, 225 |
| BspDI | ATCGAT | 1 cut(s) | 24 |
| BsrI | ACTGG | 1 cut(s) | 269 |
| BstDEI | CTNAG | 4 cut(s) | 51, 152, 183, 233 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 56 |
| BstNSI | RCATGY | 1 cut(s) | 197 |
| BstV1I | GCAGC | 1 cut(s) | 43 |
| Bsu15I | ATCGAT | 1 cut(s) | 24 |
| BsuTUI | ATCGAT | 1 cut(s) | 24 |
| ClaI | ATCGAT | 1 cut(s) | 24 |
| CviAII | CATG | 3 cut(s) | 166, 194, 248 |
| CviJI | RGCY | 6 cut(s) | 50, 56, 64, 85, 130, 151 |
| CviKI_1 | RGCY | 6 cut(s) | 50, 56, 64, 85, 130, 151 |
| DdeI | CTNAG | 4 cut(s) | 51, 152, 183, 233 |
| DraIII | CACNNNGTG | 1 cut(s) | 124 |
| Eco57I | CTGAAG | 1 cut(s) | 188 |
| Eco88I | CYCGRG | 1 cut(s) | 145 |
| FaeI | CATG | 3 cut(s) | 169, 197, 251 |
| FaiI | YATR | 4 cut(s) | 167, 195, 249, 290 |
| FaqI | GGGAC | 1 cut(s) | 281 |
| FatI | CATG | 3 cut(s) | 165, 193, 247 |
| Fnu4HI | GCNGC | 1 cut(s) | 57 |
| Fsp4HI | GCNGC | 1 cut(s) | 57 |
| FspBI | CTAG | 1 cut(s) | 60 |
| GluI | GCNGC | 1 cut(s) | 57 |
| GsuI | CTGGAG | 1 cut(s) | 107 |
| Hin1II | CATG | 3 cut(s) | 169, 197, 251 |
| HinfI | GANTC | 2 cut(s) | 179, 257 |
| HphI | GGTGA | 1 cut(s) | 201 |
| Hpy188III | TCNNGA | 3 cut(s) | 35, 96, 254 |
| HpyCH4V | TGCA | 1 cut(s) | 193 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 56 |
| HpyF3I | CTNAG | 4 cut(s) | 51, 152, 183, 233 |
| Hsp92II | CATG | 3 cut(s) | 169, 197, 251 |
| LmnI | GCTCC | 2 cut(s) | 115, 127 |
| LpnPI | CCDG | 6 cut(s) | 20, 71, 81, 170, 245, 250 |
| Lsp1109I | GCAGC | 1 cut(s) | 43 |
| MaeI | CTAG | 1 cut(s) | 60 |
| MaeIII | GTNAC | 2 cut(s) | 41, 207 |
| MhlI | GDGCHC | 1 cut(s) | 120 |
| MlyI | GAGTC | 2 cut(s) | 173, 266 |
| MnlI | CCTC | 6 cut(s) | 46, 105, 141, 147, 149, 250 |
| MseI | TTAA | 2 cut(s) | 78, 174 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 56 |
| NlaIII | CATG | 3 cut(s) | 169, 197, 251 |
| NmuCI | GTSAC | 2 cut(s) | 41, 207 |
| NspI | RCATGY | 1 cut(s) | 197 |
| PaeR7I | CTCGAG | 1 cut(s) | 145 |
| PkrI | GCNGC | 1 cut(s) | 58 |
| PleI | GAGTC | 2 cut(s) | 173, 265 |
| PpsI | GAGTC | 2 cut(s) | 173, 265 |
| PspXI | VCTCGAGB | 1 cut(s) | 145 |
| SaqAI | TTAA | 2 cut(s) | 78, 174 |
| SatI | GCNGC | 1 cut(s) | 57 |
| SchI | GAGTC | 2 cut(s) | 173, 266 |
| SduI | GDGCHC | 1 cut(s) | 120 |
| SetI | ASST | 8 cut(s) | 52, 87, 132, 141, 189, 224, 234, 242 |
| Sfr274I | CTCGAG | 1 cut(s) | 145 |
| SlaI | CTCGAG | 1 cut(s) | 145 |
| SmlI | CTYRAG | 2 cut(s) | 145, 252 |
| SmoI | CTYRAG | 2 cut(s) | 145, 252 |
| SsiI | CCGC | 1 cut(s) | 212 |
| SspMI | CTAG | 1 cut(s) | 60 |
| TaqI | TCGA | 2 cut(s) | 24, 146 |
| Tru1I | TTAA | 2 cut(s) | 78, 174 |
| Tru9I | TTAA | 2 cut(s) | 78, 174 |
| TseFI | GTSAC | 2 cut(s) | 41, 207 |
| TseI | GCWGC | 1 cut(s) | 56 |
| Tsp45I | GTSAC | 2 cut(s) | 41, 207 |
| XceI | RCATGY | 1 cut(s) | 197 |
| XhoI | CTCGAG | 1 cut(s) | 145 |
| XspI | CTAG | 1 cut(s) | 60 |