gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 196 |
| AclWI | GGATC | 1 cut(s) | 19 |
| AcsI | RAATTY | 1 cut(s) | 269 |
| AfaI | GTAC | 1 cut(s) | 432 |
| AgsI | TTSAA | 2 cut(s) | 382, 466 |
| AjnI | CCWGG | 1 cut(s) | 26 |
| AluBI | AGCT | 7 cut(s) | 120, 173, 325, 370, 427, 478, 503 |
| AluI | AGCT | 7 cut(s) | 120, 173, 325, 370, 427, 478, 503 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| AlwI | GGATC | 1 cut(s) | 19 |
| AoxI | GGCC | 2 cut(s) | 24, 95 |
| ApaI | GGGCCC | 1 cut(s) | 99 |
| ApoI | RAATTY | 1 cut(s) | 269 |
| AspS9I | GGNCC | 3 cut(s) | 95, 96, 506 |
| AsuHPI | GGTGA | 2 cut(s) | 114, 447 |
| AsuNHI | GCTAGC | 1 cut(s) | 478 |
| AvaII | GGWCC | 1 cut(s) | 506 |
| BaeGI | GKGCMC | 1 cut(s) | 99 |
| BanII | GRGCYC | 1 cut(s) | 99 |
| BbsI | GAAGAC | 1 cut(s) | 194 |
| BbvCI | CCTCAGC | 1 cut(s) | 291 |
| BciT130I | CCWGG | 1 cut(s) | 28 |
| BclI | TGATCA | 1 cut(s) | 421 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BfaI | CTAG | 3 cut(s) | 387, 459, 479 |
| BglII | AGATCT | 1 cut(s) | 158 |
| Bme1390I | CCNGG | 1 cut(s) | 28 |
| Bme18I | GGWCC | 1 cut(s) | 506 |
| BmgT120I | GGNCC | 3 cut(s) | 95, 96, 506 |
| BmiI | GGNNCC | 1 cut(s) | 97 |
| BmrFI | CCNGG | 1 cut(s) | 28 |
| BmsI | GCATC | 3 cut(s) | 48, 100, 244 |
| BmtI | GCTAGC | 1 cut(s) | 482 |
| BpiI | GAAGAC | 1 cut(s) | 194 |
| Bpu10I | CCTNAGC | 1 cut(s) | 291 |
| BsaJI | CCNNGG | 1 cut(s) | 258 |
| Bse1I | ACTGG | 4 cut(s) | 13, 155, 230, 340 |
| BseBI | CCWGG | 1 cut(s) | 28 |
| BseDI | CCNNGG | 1 cut(s) | 258 |
| BseGI | GGATG | 2 cut(s) | 259, 424 |
| BseMII | CTCAG | 2 cut(s) | 282, 406 |
| BseNI | ACTGG | 4 cut(s) | 13, 155, 230, 340 |
| BseRI | GAGGAG | 1 cut(s) | 360 |
| BseSI | GKGCMC | 1 cut(s) | 99 |
| BshFI | GGCC | 2 cut(s) | 26, 97 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsmI | GAATGC | 1 cut(s) | 388 |
| BsnI | GGCC | 2 cut(s) | 26, 97 |
| Bsp120I | GGGCCC | 1 cut(s) | 95 |
| Bsp1286I | GDGCHC | 1 cut(s) | 99 |
| Bsp1407I | TGTACA | 1 cut(s) | 430 |
| Bsp143I | GATC | 3 cut(s) | 11, 158, 421 |
| Bsp19I | CCATGG | 1 cut(s) | 258 |
| BspANI | GGCC | 2 cut(s) | 26, 97 |
| BspCNI | CTCAG | 2 cut(s) | 283, 405 |
| BspLI | GGNNCC | 1 cut(s) | 97 |
| BspOI | GCTAGC | 1 cut(s) | 482 |
| BspPI | GGATC | 1 cut(s) | 19 |
| BsrGI | TGTACA | 1 cut(s) | 430 |
| BsrI | ACTGG | 4 cut(s) | 13, 155, 230, 340 |
| BssECI | CCNNGG | 1 cut(s) | 258 |
| BssMI | GATC | 3 cut(s) | 11, 158, 421 |
| BssT1I | CCWWGG | 1 cut(s) | 258 |
| Bst2UI | CCWGG | 1 cut(s) | 28 |
| Bst6I | CTCTTC | 1 cut(s) | 26 |
| BstAUI | TGTACA | 1 cut(s) | 430 |
| BstC8I | GCNNGC | 1 cut(s) | 480 |
| BstDEI | CTNAG | 7 cut(s) | 174, 264, 291, 309, 392, 442, 472 |
| BstDSI | CCRYGG | 1 cut(s) | 258 |
| BstF5I | GGATG | 2 cut(s) | 259, 424 |
| BstKTI | GATC | 3 cut(s) | 14, 161, 424 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMBI | GATC | 3 cut(s) | 11, 158, 421 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 296 |
| BstNI | CCWGG | 1 cut(s) | 28 |
| BstSCI | CCNGG | 1 cut(s) | 26 |
| BstSLI | GKGCMC | 1 cut(s) | 99 |
| BstV2I | GAAGAC | 1 cut(s) | 194 |
| BstX2I | RGATCY | 1 cut(s) | 158 |
| BstYI | RGATCY | 1 cut(s) | 158 |
| BsuRI | GGCC | 2 cut(s) | 26, 97 |
| BtgI | CCRYGG | 1 cut(s) | 258 |
| BtsCI | GGATG | 2 cut(s) | 259, 424 |
| BtsIMutI | CAGTG | 2 cut(s) | 6, 333 |
| Cac8I | GCNNGC | 1 cut(s) | 480 |
| Cfr13I | GGNCC | 3 cut(s) | 95, 96, 506 |
| Csp6I | GTAC | 1 cut(s) | 431 |
| CviAII | CATG | 4 cut(s) | 62, 70, 259, 406 |
| CviQI | GTAC | 1 cut(s) | 431 |
| DdeI | CTNAG | 7 cut(s) | 174, 264, 291, 309, 392, 442, 472 |
| DpnI | GATC | 3 cut(s) | 13, 160, 423 |
| DpnII | GATC | 3 cut(s) | 11, 158, 421 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 196 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 196 |
| Eam1104I | CTCTTC | 1 cut(s) | 26 |
| EarI | CTCTTC | 1 cut(s) | 26 |
| Eco130I | CCWWGG | 1 cut(s) | 258 |
| Eco147I | AGGCCT | 1 cut(s) | 26 |
| Eco24I | GRGCYC | 1 cut(s) | 99 |
| Eco47I | GGWCC | 1 cut(s) | 506 |
| EcoO109I | RGGNCCY | 2 cut(s) | 95, 96 |
| EcoRII | CCWGG | 1 cut(s) | 26 |
| EcoT14I | CCWWGG | 1 cut(s) | 258 |
| EcoT22I | ATGCAT | 1 cut(s) | 63 |
| EcoT38I | GRGCYC | 1 cut(s) | 99 |
| ErhI | CCWWGG | 1 cut(s) | 258 |
| FaeI | CATG | 4 cut(s) | 65, 73, 262, 409 |
| FatI | CATG | 4 cut(s) | 61, 69, 258, 405 |
| FbaI | TGATCA | 1 cut(s) | 421 |
| FokI | GGATG | 2 cut(s) | 266, 431 |
| FriOI | GRGCYC | 1 cut(s) | 99 |
| FspBI | CTAG | 3 cut(s) | 387, 459, 479 |
| HaeIII | GGCC | 2 cut(s) | 26, 97 |
| Hin1II | CATG | 4 cut(s) | 65, 73, 262, 409 |
| HinfI | GANTC | 2 cut(s) | 390, 446 |
| HphI | GGTGA | 2 cut(s) | 114, 447 |
| Hpy166II | GTNNAC | 1 cut(s) | 433 |
| Hpy188I | TCNGA | 1 cut(s) | 202 |
| Hpy8I | GTNNAC | 1 cut(s) | 433 |
| HpyAV | CCTTC | 1 cut(s) | 489 |
| HpyCH4V | TGCA | 3 cut(s) | 61, 113, 490 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 296 |
| HpyF3I | CTNAG | 7 cut(s) | 174, 264, 291, 309, 392, 442, 472 |
| Hsp92II | CATG | 4 cut(s) | 65, 73, 262, 409 |
| Ksp22I | TGATCA | 1 cut(s) | 421 |
| Kzo9I | GATC | 3 cut(s) | 11, 158, 421 |
| LweI | GCATC | 3 cut(s) | 48, 100, 244 |
| MaeI | CTAG | 3 cut(s) | 387, 459, 479 |
| MaeIII | GTNAC | 1 cut(s) | 453 |
| MalI | GATC | 3 cut(s) | 13, 160, 423 |
| MboI | GATC | 3 cut(s) | 11, 158, 421 |
| MboII | GAAGA | 3 cut(s) | 43, 199, 236 |
| MflI | RGATCY | 1 cut(s) | 158 |
| MhlI | GDGCHC | 1 cut(s) | 99 |
| MluCI | AATT | 2 cut(s) | 163, 269 |
| MlyI | GAGTC | 1 cut(s) | 384 |
| MnlI | CCTC | 2 cut(s) | 286, 338 |
| Mph1103I | ATGCAT | 1 cut(s) | 63 |
| MseI | TTAA | 4 cut(s) | 21, 366, 414, 511 |
| MspR9I | CCNGG | 1 cut(s) | 28 |
| Mva1269I | GAATGC | 1 cut(s) | 388 |
| MvaI | CCWGG | 1 cut(s) | 28 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 296 |
| NcoI | CCATGG | 1 cut(s) | 258 |
| NdeII | GATC | 3 cut(s) | 11, 158, 421 |
| NheI | GCTAGC | 1 cut(s) | 478 |
| NlaIII | CATG | 4 cut(s) | 65, 73, 262, 409 |
| NlaIV | GGNNCC | 1 cut(s) | 97 |
| NmuCI | GTSAC | 1 cut(s) | 453 |
| NsiI | ATGCAT | 1 cut(s) | 63 |
| PceI | AGGCCT | 1 cut(s) | 26 |
| PctI | GAATGC | 1 cut(s) | 388 |
| PfeI | GAWTC | 1 cut(s) | 446 |
| PleI | GAGTC | 1 cut(s) | 384 |
| PpsI | GAGTC | 1 cut(s) | 384 |
| Psp6I | CCWGG | 1 cut(s) | 26 |
| PspGI | CCWGG | 1 cut(s) | 26 |
| PspN4I | GGNNCC | 1 cut(s) | 97 |
| PspOMI | GGGCCC | 1 cut(s) | 95 |
| PspPI | GGNCC | 3 cut(s) | 95, 96, 506 |
| PsuI | RGATCY | 1 cut(s) | 158 |
| RsaI | GTAC | 1 cut(s) | 432 |
| RsaNI | GTAC | 1 cut(s) | 431 |
| SaqAI | TTAA | 4 cut(s) | 21, 366, 414, 511 |
| Sau3AI | GATC | 3 cut(s) | 11, 158, 421 |
| Sau96I | GGNCC | 3 cut(s) | 95, 96, 506 |
| SchI | GAGTC | 1 cut(s) | 384 |
| ScrFI | CCNGG | 1 cut(s) | 28 |
| SduI | GDGCHC | 1 cut(s) | 99 |
| SfaNI | GCATC | 3 cut(s) | 48, 100, 244 |
| SinI | GGWCC | 1 cut(s) | 506 |
| Sse9I | AATT | 2 cut(s) | 163, 269 |
| SseBI | AGGCCT | 1 cut(s) | 26 |
| SspMI | CTAG | 3 cut(s) | 387, 459, 479 |
| StuI | AGGCCT | 1 cut(s) | 26 |
| StyD4I | CCNGG | 1 cut(s) | 26 |
| StyI | CCWWGG | 1 cut(s) | 258 |
| TasI | AATT | 2 cut(s) | 163, 269 |
| TatI | WGTACW | 1 cut(s) | 430 |
| TfiI | GAWTC | 1 cut(s) | 446 |
| Tru1I | TTAA | 4 cut(s) | 21, 366, 414, 511 |
| Tru9I | TTAA | 4 cut(s) | 21, 366, 414, 511 |
| TscAI | CASTG | 2 cut(s) | 13, 340 |
| TseFI | GTSAC | 1 cut(s) | 453 |
| Tsp45I | GTSAC | 1 cut(s) | 453 |
| TspDTI | ATGAA | 4 cut(s) | 78, 144, 200, 332 |
| TspRI | CASTG | 2 cut(s) | 13, 340 |
| VpaK11BI | GGWCC | 1 cut(s) | 506 |
| XapI | RAATTY | 1 cut(s) | 269 |
| XspI | CTAG | 3 cut(s) | 387, 459, 479 |
| Zsp2I | ATGCAT | 1 cut(s) | 63 |