gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 29 |
| AccI | GTMKAC | 1 cut(s) | 5 |
| AciI | CCGC | 1 cut(s) | 159 |
| AclWI | GGATC | 1 cut(s) | 211 |
| AcsI | RAATTY | 1 cut(s) | 191 |
| AfaI | GTAC | 1 cut(s) | 43 |
| AgsI | TTSAA | 4 cut(s) | 16, 109, 196, 368 |
| AluBI | AGCT | 3 cut(s) | 260, 384, 404 |
| AluI | AGCT | 3 cut(s) | 260, 384, 404 |
| Alw26I | GTCTC | 1 cut(s) | 149 |
| AlwI | GGATC | 1 cut(s) | 211 |
| AoxI | GGCC | 1 cut(s) | 184 |
| ApoI | RAATTY | 1 cut(s) | 191 |
| AsuHPI | GGTGA | 1 cut(s) | 114 |
| AsuNHI | GCTAGC | 1 cut(s) | 380 |
| BclI | TGATCA | 1 cut(s) | 46 |
| BcoDI | GTCTC | 1 cut(s) | 149 |
| BfaI | CTAG | 2 cut(s) | 309, 381 |
| BmcAI | AGTACT | 1 cut(s) | 43 |
| BmsI | GCATC | 1 cut(s) | 331 |
| BmtI | GCTAGC | 1 cut(s) | 384 |
| Bpu10I | CCTNAGC | 1 cut(s) | 147 |
| BsaI | GGTCTC | 1 cut(s) | 149 |
| BseGI | GGATG | 3 cut(s) | 8, 58, 294 |
| BseMII | CTCAG | 1 cut(s) | 138 |
| BshFI | GGCC | 1 cut(s) | 186 |
| BslFI | GGGAC | 2 cut(s) | 128, 332 |
| BsmAI | GTCTC | 1 cut(s) | 149 |
| BsmFI | GGGAC | 2 cut(s) | 128, 332 |
| BsnI | GGCC | 1 cut(s) | 186 |
| Bso31I | GGTCTC | 1 cut(s) | 149 |
| Bsp143I | GATC | 3 cut(s) | 46, 102, 216 |
| BspACI | CCGC | 1 cut(s) | 159 |
| BspANI | GGCC | 1 cut(s) | 186 |
| BspCNI | CTCAG | 1 cut(s) | 139 |
| BspOI | GCTAGC | 1 cut(s) | 384 |
| BspPI | GGATC | 1 cut(s) | 211 |
| BspTNI | GGTCTC | 1 cut(s) | 149 |
| BssMI | GATC | 3 cut(s) | 46, 102, 216 |
| Bst4CI | ACNGT | 1 cut(s) | 228 |
| BstC8I | GCNNGC | 1 cut(s) | 382 |
| BstDEI | CTNAG | 3 cut(s) | 147, 249, 395 |
| BstF5I | GGATG | 3 cut(s) | 8, 58, 294 |
| BstKTI | GATC | 3 cut(s) | 49, 105, 219 |
| BstMAI | GTCTC | 1 cut(s) | 149 |
| BstMBI | GATC | 3 cut(s) | 46, 102, 216 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 410 |
| BstX2I | RGATCY | 1 cut(s) | 216 |
| BstYI | RGATCY | 1 cut(s) | 216 |
| BsuRI | GGCC | 1 cut(s) | 186 |
| BtsCI | GGATG | 3 cut(s) | 8, 58, 294 |
| Cac8I | GCNNGC | 1 cut(s) | 382 |
| Csp6I | GTAC | 1 cut(s) | 42 |
| CviAII | CATG | 1 cut(s) | 118 |
| CviJI | RGCY | 6 cut(s) | 22, 83, 186, 260, 384, 404 |
| CviKI_1 | RGCY | 6 cut(s) | 22, 83, 186, 260, 384, 404 |
| CviQI | GTAC | 1 cut(s) | 42 |
| DdeI | CTNAG | 3 cut(s) | 147, 249, 395 |
| DpnI | GATC | 3 cut(s) | 48, 104, 218 |
| DpnII | GATC | 3 cut(s) | 46, 102, 216 |
| Eco31I | GGTCTC | 1 cut(s) | 149 |
| FaeI | CATG | 1 cut(s) | 121 |
| FaiI | YATR | 9 cut(s) | 29, 66, 78, 119, 171, 173, 255, 287, 357 |
| FaqI | GGGAC | 2 cut(s) | 128, 332 |
| FatI | CATG | 1 cut(s) | 117 |
| FbaI | TGATCA | 1 cut(s) | 46 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| FokI | GGATG | 2 cut(s) | 65, 281 |
| FspBI | CTAG | 2 cut(s) | 309, 381 |
| HaeIII | GGCC | 1 cut(s) | 186 |
| Hin1II | CATG | 1 cut(s) | 121 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HindIII | AAGCTT | 1 cut(s) | 258 |
| HphI | GGTGA | 1 cut(s) | 114 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 1 cut(s) | 340 |
| Hpy188III | TCNNGA | 4 cut(s) | 50, 106, 298, 317 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyAV | CCTTC | 1 cut(s) | 22 |
| HpyCH4III | ACNGT | 1 cut(s) | 228 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 410 |
| HpyF3I | CTNAG | 3 cut(s) | 147, 249, 395 |
| Hsp92II | CATG | 1 cut(s) | 121 |
| Ksp22I | TGATCA | 1 cut(s) | 46 |
| Kzo9I | GATC | 3 cut(s) | 46, 102, 216 |
| LpnPI | CCDG | 5 cut(s) | 35, 159, 249, 311, 390 |
| LweI | GCATC | 1 cut(s) | 331 |
| MaeI | CTAG | 2 cut(s) | 309, 381 |
| MaeIII | GTNAC | 1 cut(s) | 120 |
| MalI | GATC | 3 cut(s) | 48, 104, 218 |
| MboI | GATC | 3 cut(s) | 46, 102, 216 |
| MflI | RGATCY | 1 cut(s) | 216 |
| MluCI | AATT | 2 cut(s) | 98, 191 |
| MnlI | CCTC | 2 cut(s) | 126, 402 |
| MseI | TTAA | 2 cut(s) | 189, 323 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 410 |
| NdeII | GATC | 3 cut(s) | 46, 102, 216 |
| NheI | GCTAGC | 1 cut(s) | 380 |
| NlaIII | CATG | 1 cut(s) | 121 |
| NmuCI | GTSAC | 1 cut(s) | 120 |
| PflFI | GACNNNGTC | 1 cut(s) | 118 |
| PsiI | TTATAA | 1 cut(s) | 29 |
| PsuI | RGATCY | 1 cut(s) | 216 |
| PsyI | GACNNNGTC | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 43 |
| RsaNI | GTAC | 1 cut(s) | 42 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SaqAI | TTAA | 2 cut(s) | 189, 323 |
| Sau3AI | GATC | 3 cut(s) | 46, 102, 216 |
| ScaI | AGTACT | 1 cut(s) | 43 |
| SetI | ASST | 6 cut(s) | 127, 213, 225, 262, 386, 406 |
| SfaNI | GCATC | 1 cut(s) | 331 |
| Sse9I | AATT | 2 cut(s) | 98, 191 |
| SsiI | CCGC | 1 cut(s) | 159 |
| SspMI | CTAG | 2 cut(s) | 309, 381 |
| TaaI | ACNGT | 1 cut(s) | 228 |
| TaqI | TCGA | 1 cut(s) | 5 |
| TasI | AATT | 2 cut(s) | 98, 191 |
| TatI | WGTACW | 1 cut(s) | 41 |
| Tru1I | TTAA | 2 cut(s) | 189, 323 |
| Tru9I | TTAA | 2 cut(s) | 189, 323 |
| TseFI | GTSAC | 1 cut(s) | 120 |
| Tsp45I | GTSAC | 1 cut(s) | 120 |
| TspDTI | ATGAA | 4 cut(s) | 219, 270, 337, 344 |
| Tth111I | GACNNNGTC | 1 cut(s) | 118 |
| XapI | RAATTY | 1 cut(s) | 191 |
| XmiI | GTMKAC | 1 cut(s) | 5 |
| XspI | CTAG | 2 cut(s) | 309, 381 |
| ZrmI | AGTACT | 1 cut(s) | 43 |