gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 190, 332 |
| AflII | CTTAAG | 1 cut(s) | 392 |
| AgsI | TTSAA | 2 cut(s) | 109, 328 |
| AluBI | AGCT | 3 cut(s) | 26, 235, 400 |
| AluI | AGCT | 3 cut(s) | 26, 235, 400 |
| Alw21I | GWGCWC | 1 cut(s) | 402 |
| AsuNHI | GCTAGC | 1 cut(s) | 235 |
| BanII | GRGCYC | 1 cut(s) | 402 |
| Bbv12I | GWGCWC | 1 cut(s) | 402 |
| BccI | CCATC | 2 cut(s) | 163, 400 |
| BclI | TGATCA | 1 cut(s) | 372 |
| BfaI | CTAG | 2 cut(s) | 32, 236 |
| BfmI | CTRYAG | 3 cut(s) | 19, 39, 99 |
| BfrI | CTTAAG | 1 cut(s) | 392 |
| BmiI | GGNNCC | 1 cut(s) | 13 |
| BmsI | GCATC | 1 cut(s) | 248 |
| BmtI | GCTAGC | 1 cut(s) | 239 |
| Bpu10I | CCTNAGC | 1 cut(s) | 231 |
| BseGI | GGATG | 2 cut(s) | 174, 424 |
| BseMII | CTCAG | 2 cut(s) | 78, 222 |
| BsiHKAI | GWGCWC | 1 cut(s) | 402 |
| BsmI | GAATGC | 1 cut(s) | 63 |
| Bsp1286I | GDGCHC | 1 cut(s) | 402 |
| Bsp143I | GATC | 1 cut(s) | 372 |
| BspCNI | CTCAG | 2 cut(s) | 79, 223 |
| BspHI | TCATGA | 1 cut(s) | 319 |
| BspLI | GGNNCC | 1 cut(s) | 13 |
| BspOI | GCTAGC | 1 cut(s) | 239 |
| BspQI | GCTCTTC | 1 cut(s) | 219 |
| BspTI | CTTAAG | 1 cut(s) | 392 |
| BssMI | GATC | 1 cut(s) | 372 |
| Bst4CI | ACNGT | 1 cut(s) | 208 |
| Bst6I | CTCTTC | 1 cut(s) | 219 |
| BstAFI | CTTAAG | 1 cut(s) | 392 |
| BstC8I | GCNNGC | 1 cut(s) | 237 |
| BstDEI | CTNAG | 4 cut(s) | 87, 231, 267, 309 |
| BstF5I | GGATG | 2 cut(s) | 174, 424 |
| BstKTI | GATC | 1 cut(s) | 375 |
| BstMBI | GATC | 1 cut(s) | 372 |
| BstSFI | CTRYAG | 3 cut(s) | 19, 39, 99 |
| BtsCI | GGATG | 2 cut(s) | 174, 424 |
| Cac8I | GCNNGC | 1 cut(s) | 237 |
| CciI | TCATGA | 1 cut(s) | 319 |
| Csp6I | GTAC | 2 cut(s) | 189, 331 |
| CviAII | CATG | 3 cut(s) | 52, 62, 320 |
| CviJI | RGCY | 8 cut(s) | 26, 31, 97, 173, 229, 235, 304, 400 |
| CviKI_1 | RGCY | 8 cut(s) | 26, 31, 97, 173, 229, 235, 304, 400 |
| CviQI | GTAC | 2 cut(s) | 189, 331 |
| DdeI | CTNAG | 4 cut(s) | 87, 231, 267, 309 |
| DpnI | GATC | 1 cut(s) | 374 |
| DpnII | GATC | 1 cut(s) | 372 |
| DraI | TTTAAA | 1 cut(s) | 274 |
| Eam1104I | CTCTTC | 1 cut(s) | 219 |
| EarI | CTCTTC | 1 cut(s) | 219 |
| Ecl136II | GAGCTC | 1 cut(s) | 400 |
| Eco24I | GRGCYC | 1 cut(s) | 402 |
| Eco53kI | GAGCTC | 1 cut(s) | 400 |
| EcoICRI | GAGCTC | 1 cut(s) | 400 |
| EcoT22I | ATGCAT | 1 cut(s) | 63 |
| EcoT38I | GRGCYC | 1 cut(s) | 402 |
| FaeI | CATG | 3 cut(s) | 55, 65, 323 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 386, 418 |
| FatI | CATG | 3 cut(s) | 51, 61, 319 |
| FbaI | TGATCA | 1 cut(s) | 372 |
| FokI | GGATG | 1 cut(s) | 181 |
| FriOI | GRGCYC | 1 cut(s) | 402 |
| FspBI | CTAG | 2 cut(s) | 32, 236 |
| Hin1II | CATG | 3 cut(s) | 55, 65, 323 |
| HinfI | GANTC | 1 cut(s) | 35 |
| Hpy166II | GTNNAC | 1 cut(s) | 333 |
| Hpy188I | TCNGA | 1 cut(s) | 244 |
| Hpy188III | TCNNGA | 3 cut(s) | 251, 320, 403 |
| Hpy8I | GTNNAC | 1 cut(s) | 333 |
| HpyCH4III | ACNGT | 1 cut(s) | 208 |
| HpyCH4V | TGCA | 1 cut(s) | 61 |
| HpyF3I | CTNAG | 4 cut(s) | 87, 231, 267, 309 |
| Hsp92II | CATG | 3 cut(s) | 55, 65, 323 |
| Ksp22I | TGATCA | 1 cut(s) | 372 |
| Kzo9I | GATC | 1 cut(s) | 372 |
| LguI | GCTCTTC | 1 cut(s) | 219 |
| LmnI | GCTCC | 1 cut(s) | 397 |
| LpnPI | CCDG | 4 cut(s) | 196, 236, 243, 327 |
| LweI | GCATC | 1 cut(s) | 248 |
| MaeI | CTAG | 2 cut(s) | 32, 236 |
| MalI | GATC | 1 cut(s) | 374 |
| MboI | GATC | 1 cut(s) | 372 |
| MboII | GAAGA | 2 cut(s) | 236, 379 |
| MhlI | GDGCHC | 1 cut(s) | 402 |
| MluCI | AATT | 3 cut(s) | 6, 46, 73 |
| MlyI | GAGTC | 1 cut(s) | 29 |
| MnlI | CCTC | 2 cut(s) | 82, 202 |
| Mph1103I | ATGCAT | 1 cut(s) | 63 |
| MseI | TTAA | 2 cut(s) | 273, 393 |
| MslI | CAYNNNNRTG | 1 cut(s) | 56 |
| MspCI | CTTAAG | 1 cut(s) | 392 |
| Mva1269I | GAATGC | 1 cut(s) | 63 |
| NdeII | GATC | 1 cut(s) | 372 |
| NheI | GCTAGC | 1 cut(s) | 235 |
| NlaIII | CATG | 3 cut(s) | 55, 65, 323 |
| NlaIV | GGNNCC | 1 cut(s) | 13 |
| NsiI | ATGCAT | 1 cut(s) | 63 |
| PagI | TCATGA | 1 cut(s) | 319 |
| PciSI | GCTCTTC | 1 cut(s) | 219 |
| PctI | GAATGC | 1 cut(s) | 63 |
| PleI | GAGTC | 1 cut(s) | 29 |
| PpsI | GAGTC | 1 cut(s) | 29 |
| Psp124BI | GAGCTC | 1 cut(s) | 402 |
| PspN4I | GGNNCC | 1 cut(s) | 13 |
| RsaI | GTAC | 2 cut(s) | 190, 332 |
| RsaNI | GTAC | 2 cut(s) | 189, 331 |
| RseI | CAYNNNNRTG | 1 cut(s) | 56 |
| SacI | GAGCTC | 1 cut(s) | 402 |
| SapI | GCTCTTC | 1 cut(s) | 219 |
| SaqAI | TTAA | 2 cut(s) | 273, 393 |
| Sau3AI | GATC | 1 cut(s) | 372 |
| SchI | GAGTC | 1 cut(s) | 29 |
| SduI | GDGCHC | 1 cut(s) | 402 |
| SetI | ASST | 5 cut(s) | 28, 194, 237, 265, 402 |
| SfaNI | GCATC | 1 cut(s) | 248 |
| SfcI | CTRYAG | 3 cut(s) | 19, 39, 99 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 56 |
| SmlI | CTYRAG | 1 cut(s) | 392 |
| SmoI | CTYRAG | 1 cut(s) | 392 |
| Sse9I | AATT | 3 cut(s) | 6, 46, 73 |
| SspMI | CTAG | 2 cut(s) | 32, 236 |
| SstI | GAGCTC | 1 cut(s) | 402 |
| TaaI | ACNGT | 1 cut(s) | 208 |
| TasI | AATT | 3 cut(s) | 6, 46, 73 |
| TatI | WGTACW | 1 cut(s) | 330 |
| Tru1I | TTAA | 2 cut(s) | 273, 393 |
| Tru9I | TTAA | 2 cut(s) | 273, 393 |
| TspDTI | ATGAA | 4 cut(s) | 126, 144, 308, 380 |
| Vha464I | CTTAAG | 1 cut(s) | 392 |
| XspI | CTAG | 2 cut(s) | 32, 236 |
| Zsp2I | ATGCAT | 1 cut(s) | 63 |