gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 110 |
| AcsI | RAATTY | 1 cut(s) | 353 |
| AcuI | CTGAAG | 1 cut(s) | 270 |
| AgsI | TTSAA | 4 cut(s) | 16, 26, 42, 49 |
| AjnI | CCWGG | 2 cut(s) | 198, 297 |
| AluBI | AGCT | 2 cut(s) | 125, 314 |
| AluI | AGCT | 2 cut(s) | 125, 314 |
| AlwI | GGATC | 1 cut(s) | 110 |
| AoxI | GGCC | 1 cut(s) | 195 |
| ApoI | RAATTY | 1 cut(s) | 353 |
| AspS9I | GGNCC | 1 cut(s) | 196 |
| BaeGI | GKGCMC | 1 cut(s) | 328 |
| BccI | CCATC | 3 cut(s) | 48, 187, 353 |
| BciT130I | CCWGG | 2 cut(s) | 200, 299 |
| BciVI | GTATCC | 2 cut(s) | 77, 313 |
| BfaI | CTAG | 5 cut(s) | 68, 80, 141, 147, 260 |
| BfuI | GTATCC | 2 cut(s) | 77, 313 |
| Bme1390I | CCNGG | 2 cut(s) | 200, 299 |
| BmgT120I | GGNCC | 1 cut(s) | 196 |
| BmrFI | CCNGG | 2 cut(s) | 200, 299 |
| BmrI | ACTGGG | 1 cut(s) | 330 |
| BmuI | ACTGGG | 1 cut(s) | 330 |
| BsaJI | CCNNGG | 1 cut(s) | 198 |
| Bse1I | ACTGG | 2 cut(s) | 325, 349 |
| BseBI | CCWGG | 2 cut(s) | 200, 299 |
| BseDI | CCNNGG | 1 cut(s) | 198 |
| BseGI | GGATG | 1 cut(s) | 198 |
| BseNI | ACTGG | 2 cut(s) | 325, 349 |
| BseRI | GAGGAG | 1 cut(s) | 302 |
| BseSI | GKGCMC | 1 cut(s) | 328 |
| BshFI | GGCC | 1 cut(s) | 197 |
| BsmI | GAATGC | 1 cut(s) | 340 |
| BsnI | GGCC | 1 cut(s) | 197 |
| Bsp1286I | GDGCHC | 1 cut(s) | 328 |
| Bsp143I | GATC | 1 cut(s) | 115 |
| BspANI | GGCC | 1 cut(s) | 197 |
| BspPI | GGATC | 1 cut(s) | 110 |
| BsrI | ACTGG | 2 cut(s) | 325, 349 |
| BssECI | CCNNGG | 1 cut(s) | 198 |
| BssMI | GATC | 1 cut(s) | 115 |
| Bst2UI | CCWGG | 2 cut(s) | 200, 299 |
| Bst4CI | ACNGT | 2 cut(s) | 75, 89 |
| BstF5I | GGATG | 1 cut(s) | 198 |
| BstKTI | GATC | 1 cut(s) | 118 |
| BstMBI | GATC | 1 cut(s) | 115 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 260 |
| BstNI | CCWGG | 2 cut(s) | 200, 299 |
| BstNSI | RCATGY | 1 cut(s) | 104 |
| BstSCI | CCNGG | 2 cut(s) | 198, 297 |
| BstSLI | GKGCMC | 1 cut(s) | 328 |
| BstX2I | RGATCY | 1 cut(s) | 115 |
| BstYI | RGATCY | 1 cut(s) | 115 |
| BsuI | GTATCC | 2 cut(s) | 77, 313 |
| BsuRI | GGCC | 1 cut(s) | 197 |
| BtsCI | GGATG | 1 cut(s) | 198 |
| Cfr13I | GGNCC | 1 cut(s) | 196 |
| CsiI | ACCWGGT | 1 cut(s) | 297 |
| CviAII | CATG | 1 cut(s) | 101 |
| CviJI | RGCY | 3 cut(s) | 125, 197, 314 |
| CviKI_1 | RGCY | 3 cut(s) | 125, 197, 314 |
| DpnI | GATC | 1 cut(s) | 117 |
| DpnII | GATC | 1 cut(s) | 115 |
| Eco57I | CTGAAG | 1 cut(s) | 270 |
| EcoRII | CCWGG | 2 cut(s) | 198, 297 |
| FaeI | CATG | 1 cut(s) | 104 |
| FaiI | YATR | 7 cut(s) | 96, 102, 168, 209, 221, 332, 350 |
| FatI | CATG | 1 cut(s) | 100 |
| FokI | GGATG | 1 cut(s) | 205 |
| FspBI | CTAG | 5 cut(s) | 68, 80, 141, 147, 260 |
| HaeIII | GGCC | 1 cut(s) | 197 |
| Hin1II | CATG | 1 cut(s) | 104 |
| Hpy188I | TCNGA | 3 cut(s) | 226, 307, 377 |
| Hpy188III | TCNNGA | 1 cut(s) | 248 |
| HpyCH4III | ACNGT | 2 cut(s) | 75, 89 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 260 |
| Hsp92II | CATG | 1 cut(s) | 104 |
| Kzo9I | GATC | 1 cut(s) | 115 |
| LpnPI | CCDG | 8 cut(s) | 135, 185, 212, 261, 284, 306, 311, 330 |
| MabI | ACCWGGT | 1 cut(s) | 297 |
| MaeI | CTAG | 5 cut(s) | 68, 80, 141, 147, 260 |
| MalI | GATC | 1 cut(s) | 117 |
| MboI | GATC | 1 cut(s) | 115 |
| MboII | GAAGA | 2 cut(s) | 125, 223 |
| MflI | RGATCY | 1 cut(s) | 115 |
| MhlI | GDGCHC | 1 cut(s) | 328 |
| MluCI | AATT | 4 cut(s) | 10, 21, 128, 353 |
| MnlI | CCTC | 2 cut(s) | 116, 280 |
| MseI | TTAA | 3 cut(s) | 9, 33, 234 |
| MspA1I | CMGCKG | 1 cut(s) | 125 |
| MspR9I | CCNGG | 2 cut(s) | 200, 299 |
| Mva1269I | GAATGC | 1 cut(s) | 340 |
| MvaI | CCWGG | 2 cut(s) | 200, 299 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 260 |
| NdeII | GATC | 1 cut(s) | 115 |
| NlaIII | CATG | 1 cut(s) | 104 |
| NspI | RCATGY | 1 cut(s) | 104 |
| PctI | GAATGC | 1 cut(s) | 340 |
| Psp6I | CCWGG | 2 cut(s) | 198, 297 |
| PspGI | CCWGG | 2 cut(s) | 198, 297 |
| PspPI | GGNCC | 1 cut(s) | 196 |
| PsuI | RGATCY | 1 cut(s) | 115 |
| PvuII | CAGCTG | 1 cut(s) | 125 |
| SaqAI | TTAA | 3 cut(s) | 9, 33, 234 |
| Sau3AI | GATC | 1 cut(s) | 115 |
| Sau96I | GGNCC | 1 cut(s) | 196 |
| ScrFI | CCNGG | 2 cut(s) | 200, 299 |
| SduI | GDGCHC | 1 cut(s) | 328 |
| SetI | ASST | 4 cut(s) | 69, 127, 303, 316 |
| SexAI | ACCWGGT | 1 cut(s) | 297 |
| Sse9I | AATT | 4 cut(s) | 10, 21, 128, 353 |
| SspMI | CTAG | 5 cut(s) | 68, 80, 141, 147, 260 |
| StyD4I | CCNGG | 2 cut(s) | 198, 297 |
| TaaI | ACNGT | 2 cut(s) | 75, 89 |
| TasI | AATT | 4 cut(s) | 10, 21, 128, 353 |
| Tru1I | TTAA | 3 cut(s) | 9, 33, 234 |
| Tru9I | TTAA | 3 cut(s) | 9, 33, 234 |
| TspDTI | ATGAA | 5 cut(s) | 126, 170, 224, 347, 365 |
| XapI | RAATTY | 1 cut(s) | 353 |
| XceI | RCATGY | 1 cut(s) | 104 |
| XspI | CTAG | 5 cut(s) | 68, 80, 141, 147, 260 |