gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 116, 129 |
| AgsI | TTSAA | 4 cut(s) | 55, 176, 283, 364 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 18, 50 |
| AluBI | AGCT | 2 cut(s) | 34, 79 |
| AluI | AGCT | 2 cut(s) | 34, 79 |
| Alw21I | GWGCWC | 2 cut(s) | 81, 114 |
| AlwI | GGATC | 2 cut(s) | 116, 129 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 260 |
| AxyI | CCTNAGG | 1 cut(s) | 129 |
| BamHI | GGATCC | 1 cut(s) | 121 |
| BanII | GRGCYC | 1 cut(s) | 81 |
| Bbv12I | GWGCWC | 2 cut(s) | 81, 114 |
| BclI | TGATCA | 3 cut(s) | 103, 207, 213 |
| BfaI | CTAG | 1 cut(s) | 381 |
| BmiI | GGNNCC | 1 cut(s) | 123 |
| BmsI | GCATC | 1 cut(s) | 345 |
| Bpu10I | CCTNAGC | 1 cut(s) | 270 |
| BpuEI | CTTGAG | 1 cut(s) | 98 |
| BsaBI | GATNNNNATC | 1 cut(s) | 212 |
| Bse21I | CCTNAGG | 1 cut(s) | 129 |
| Bse3DI | GCAATG | 1 cut(s) | 288 |
| Bse8I | GATNNNNATC | 1 cut(s) | 212 |
| BseGI | GGATG | 1 cut(s) | 360 |
| BseJI | GATNNNNATC | 1 cut(s) | 212 |
| BseMI | GCAATG | 1 cut(s) | 288 |
| BseMII | CTCAG | 5 cut(s) | 120, 252, 285, 312, 324 |
| BsiHKAI | GWGCWC | 2 cut(s) | 81, 114 |
| BsmI | GAATGC | 1 cut(s) | 249 |
| Bsp1286I | GDGCHC | 2 cut(s) | 81, 114 |
| Bsp143I | GATC | 4 cut(s) | 103, 121, 207, 213 |
| BspCNI | CTCAG | 5 cut(s) | 121, 253, 286, 313, 323 |
| BspHI | TCATGA | 3 cut(s) | 210, 336, 348 |
| BspLI | GGNNCC | 1 cut(s) | 123 |
| BspPI | GGATC | 2 cut(s) | 116, 129 |
| BsrDI | GCAATG | 1 cut(s) | 288 |
| BssMI | GATC | 4 cut(s) | 103, 121, 207, 213 |
| BstC8I | GCNNGC | 1 cut(s) | 151 |
| BstDEI | CTNAG | 6 cut(s) | 129, 261, 270, 294, 310, 321 |
| BstF5I | GGATG | 1 cut(s) | 360 |
| BstKTI | GATC | 4 cut(s) | 106, 124, 210, 216 |
| BstMBI | GATC | 4 cut(s) | 103, 121, 207, 213 |
| BstX2I | RGATCY | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 121 |
| Bsu36I | CCTNAGG | 1 cut(s) | 129 |
| BtsCI | GGATG | 1 cut(s) | 360 |
| Cac8I | GCNNGC | 1 cut(s) | 151 |
| CaiI | CAGNNNCTG | 1 cut(s) | 260 |
| CciI | TCATGA | 3 cut(s) | 210, 336, 348 |
| CviAII | CATG | 4 cut(s) | 107, 211, 337, 349 |
| CviJI | RGCY | 6 cut(s) | 24, 34, 45, 79, 203, 320 |
| CviKI_1 | RGCY | 6 cut(s) | 24, 34, 45, 79, 203, 320 |
| DdeI | CTNAG | 6 cut(s) | 129, 261, 270, 294, 310, 321 |
| DpnI | GATC | 4 cut(s) | 105, 123, 209, 215 |
| DpnII | GATC | 4 cut(s) | 103, 121, 207, 213 |
| DraI | TTTAAA | 1 cut(s) | 304 |
| Ecl136II | GAGCTC | 1 cut(s) | 79 |
| Eco24I | GRGCYC | 1 cut(s) | 81 |
| Eco53kI | GAGCTC | 1 cut(s) | 79 |
| Eco81I | CCTNAGG | 1 cut(s) | 129 |
| EcoICRI | GAGCTC | 1 cut(s) | 79 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 81 |
| FaeI | CATG | 4 cut(s) | 110, 214, 340, 352 |
| FaiI | YATR | 8 cut(s) | 14, 102, 108, 212, 227, 267, 338, 350 |
| FatI | CATG | 4 cut(s) | 106, 210, 336, 348 |
| FbaI | TGATCA | 3 cut(s) | 103, 207, 213 |
| FokI | GGATG | 1 cut(s) | 367 |
| FriOI | GRGCYC | 1 cut(s) | 81 |
| FspBI | CTAG | 1 cut(s) | 381 |
| Hin1II | CATG | 4 cut(s) | 110, 214, 340, 352 |
| HinfI | GANTC | 1 cut(s) | 257 |
| Hpy188I | TCNGA | 3 cut(s) | 39, 262, 313 |
| Hpy188III | TCNNGA | 5 cut(s) | 211, 217, 254, 337, 349 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 149, 358 |
| HpyF3I | CTNAG | 6 cut(s) | 129, 261, 270, 294, 310, 321 |
| Hsp92II | CATG | 4 cut(s) | 110, 214, 340, 352 |
| Ksp22I | TGATCA | 3 cut(s) | 103, 207, 213 |
| Kzo9I | GATC | 4 cut(s) | 103, 121, 207, 213 |
| LpnPI | CCDG | 5 cut(s) | 81, 139, 141, 243, 267 |
| LweI | GCATC | 1 cut(s) | 345 |
| MaeI | CTAG | 1 cut(s) | 381 |
| MalI | GATC | 4 cut(s) | 105, 123, 209, 215 |
| MboI | GATC | 4 cut(s) | 103, 121, 207, 213 |
| MflI | RGATCY | 1 cut(s) | 121 |
| MhlI | GDGCHC | 2 cut(s) | 81, 114 |
| MluCI | AATT | 2 cut(s) | 27, 134 |
| MnlI | CCTC | 5 cut(s) | 112, 124, 151, 239, 345 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 1 cut(s) | 303 |
| MslI | CAYNNNNRTG | 1 cut(s) | 353 |
| Mva1269I | GAATGC | 1 cut(s) | 249 |
| NdeII | GATC | 4 cut(s) | 103, 121, 207, 213 |
| NlaIII | CATG | 4 cut(s) | 110, 214, 340, 352 |
| NlaIV | GGNNCC | 1 cut(s) | 123 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PagI | TCATGA | 3 cut(s) | 210, 336, 348 |
| PctI | GAATGC | 1 cut(s) | 249 |
| PfeI | GAWTC | 1 cut(s) | 257 |
| Psp124BI | GAGCTC | 1 cut(s) | 81 |
| PspN4I | GGNNCC | 1 cut(s) | 123 |
| PstNI | CAGNNNCTG | 1 cut(s) | 260 |
| PsuI | RGATCY | 1 cut(s) | 121 |
| RseI | CAYNNNNRTG | 1 cut(s) | 353 |
| SacI | GAGCTC | 1 cut(s) | 81 |
| SaqAI | TTAA | 1 cut(s) | 303 |
| Sau3AI | GATC | 4 cut(s) | 103, 121, 207, 213 |
| SduI | GDGCHC | 2 cut(s) | 81, 114 |
| SetI | ASST | 5 cut(s) | 36, 81, 130, 162, 232 |
| SfaNI | GCATC | 1 cut(s) | 345 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 353 |
| SmlI | CTYRAG | 1 cut(s) | 113 |
| SmoI | CTYRAG | 1 cut(s) | 113 |
| Sse9I | AATT | 2 cut(s) | 27, 134 |
| SspMI | CTAG | 1 cut(s) | 381 |
| SstI | GAGCTC | 1 cut(s) | 81 |
| TasI | AATT | 2 cut(s) | 27, 134 |
| TfiI | GAWTC | 1 cut(s) | 257 |
| Tru1I | TTAA | 1 cut(s) | 303 |
| Tru9I | TTAA | 1 cut(s) | 303 |
| TspDTI | ATGAA | 1 cut(s) | 353 |
| XspI | CTAG | 1 cut(s) | 381 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |