gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 174 |
| AcuI | CTGAAG | 1 cut(s) | 141 |
| AfaI | GTAC | 1 cut(s) | 211 |
| AgsI | TTSAA | 1 cut(s) | 10 |
| AluBI | AGCT | 2 cut(s) | 256, 316 |
| AluI | AGCT | 2 cut(s) | 256, 316 |
| Alw21I | GWGCWC | 1 cut(s) | 143 |
| AlwI | GGATC | 1 cut(s) | 174 |
| Ama87I | CYCGRG | 1 cut(s) | 251 |
| ApeKI | GCWGC | 1 cut(s) | 316 |
| AsuHPI | GGTGA | 1 cut(s) | 97 |
| AsuNHI | GCTAGC | 1 cut(s) | 256 |
| AvaI | CYCGRG | 1 cut(s) | 251 |
| Bbv12I | GWGCWC | 1 cut(s) | 143 |
| BbvI | GCAGC | 1 cut(s) | 303 |
| BfaI | CTAG | 3 cut(s) | 53, 257, 320 |
| BfmI | CTRYAG | 1 cut(s) | 40 |
| BisI | GCNGC | 1 cut(s) | 317 |
| BlsI | GCNGC | 1 cut(s) | 318 |
| BmeT110I | CYCGRG | 1 cut(s) | 251 |
| BmiI | GGNNCC | 1 cut(s) | 34 |
| BmsI | GCATC | 1 cut(s) | 269 |
| BmtI | GCTAGC | 1 cut(s) | 260 |
| BsaJI | CCNNGG | 1 cut(s) | 108 |
| Bse1I | ACTGG | 1 cut(s) | 34 |
| BseDI | CCNNGG | 1 cut(s) | 108 |
| BseNI | ACTGG | 1 cut(s) | 34 |
| BseXI | GCAGC | 1 cut(s) | 303 |
| BsiHKAI | GWGCWC | 1 cut(s) | 143 |
| BsiHKCI | CYCGRG | 1 cut(s) | 251 |
| BsmI | GAATGC | 1 cut(s) | 84 |
| BsoBI | CYCGRG | 1 cut(s) | 251 |
| Bsp1286I | GDGCHC | 1 cut(s) | 143 |
| Bsp143I | GATC | 2 cut(s) | 157, 179 |
| BspLI | GGNNCC | 1 cut(s) | 34 |
| BspOI | GCTAGC | 1 cut(s) | 260 |
| BspPI | GGATC | 1 cut(s) | 174 |
| BsrI | ACTGG | 1 cut(s) | 34 |
| BssECI | CCNNGG | 1 cut(s) | 108 |
| BssMI | GATC | 2 cut(s) | 157, 179 |
| Bst4CI | ACNGT | 2 cut(s) | 14, 229 |
| Bst6I | CTCTTC | 1 cut(s) | 117 |
| BstC8I | GCNNGC | 1 cut(s) | 258 |
| BstDEI | CTNAG | 3 cut(s) | 144, 195, 288 |
| BstKTI | GATC | 2 cut(s) | 160, 182 |
| BstMBI | GATC | 2 cut(s) | 157, 179 |
| BstSFI | CTRYAG | 1 cut(s) | 40 |
| BstV1I | GCAGC | 1 cut(s) | 303 |
| BstX2I | RGATCY | 1 cut(s) | 179 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 190 |
| BstYI | RGATCY | 1 cut(s) | 179 |
| BtsIMutI | CAGTG | 1 cut(s) | 19 |
| Cac8I | GCNNGC | 1 cut(s) | 258 |
| Csp6I | GTAC | 1 cut(s) | 210 |
| CviAII | CATG | 1 cut(s) | 83 |
| CviJI | RGCY | 5 cut(s) | 52, 194, 256, 316, 324 |
| CviKI_1 | RGCY | 5 cut(s) | 52, 194, 256, 316, 324 |
| CviQI | GTAC | 1 cut(s) | 210 |
| DdeI | CTNAG | 3 cut(s) | 144, 195, 288 |
| DpnI | GATC | 2 cut(s) | 159, 181 |
| DpnII | GATC | 2 cut(s) | 157, 179 |
| DraI | TTTAAA | 1 cut(s) | 295 |
| Eam1104I | CTCTTC | 1 cut(s) | 117 |
| EarI | CTCTTC | 1 cut(s) | 117 |
| Eco57I | CTGAAG | 1 cut(s) | 141 |
| Eco88I | CYCGRG | 1 cut(s) | 251 |
| EcoT22I | ATGCAT | 1 cut(s) | 84 |
| FaeI | CATG | 1 cut(s) | 86 |
| FaiI | YATR | 9 cut(s) | 42, 72, 74, 84, 92, 177, 218, 242, 281 |
| FatI | CATG | 1 cut(s) | 82 |
| Fnu4HI | GCNGC | 1 cut(s) | 317 |
| Fsp4HI | GCNGC | 1 cut(s) | 317 |
| FspBI | CTAG | 3 cut(s) | 53, 257, 320 |
| GluI | GCNGC | 1 cut(s) | 317 |
| Hin1II | CATG | 1 cut(s) | 86 |
| HincII | GTYRAC | 2 cut(s) | 27, 129 |
| HindII | GTYRAC | 2 cut(s) | 27, 129 |
| HinfI | GANTC | 1 cut(s) | 56 |
| HpaI | GTTAAC | 2 cut(s) | 27, 129 |
| HphI | GGTGA | 1 cut(s) | 97 |
| Hpy166II | GTNNAC | 2 cut(s) | 27, 129 |
| Hpy188I | TCNGA | 2 cut(s) | 233, 265 |
| Hpy188III | TCNNGA | 1 cut(s) | 19 |
| Hpy8I | GTNNAC | 2 cut(s) | 27, 129 |
| HpyAV | CCTTC | 1 cut(s) | 142 |
| HpyCH4III | ACNGT | 2 cut(s) | 14, 229 |
| HpyCH4V | TGCA | 1 cut(s) | 82 |
| HpyF3I | CTNAG | 3 cut(s) | 144, 195, 288 |
| Hsp92II | CATG | 1 cut(s) | 86 |
| KspAI | GTTAAC | 2 cut(s) | 27, 129 |
| Kzo9I | GATC | 2 cut(s) | 157, 179 |
| LpnPI | CCDG | 2 cut(s) | 15, 132 |
| Lsp1109I | GCAGC | 1 cut(s) | 303 |
| LweI | GCATC | 1 cut(s) | 269 |
| MaeI | CTAG | 3 cut(s) | 53, 257, 320 |
| MalI | GATC | 2 cut(s) | 159, 181 |
| MboI | GATC | 2 cut(s) | 157, 179 |
| MboII | GAAGA | 2 cut(s) | 134, 257 |
| MflI | RGATCY | 1 cut(s) | 179 |
| MhlI | GDGCHC | 1 cut(s) | 143 |
| MmeI | TCCRAC | 1 cut(s) | 211 |
| MnlI | CCTC | 4 cut(s) | 103, 212, 223, 227 |
| Mph1103I | ATGCAT | 1 cut(s) | 84 |
| MseI | TTAA | 3 cut(s) | 26, 128, 294 |
| Mva1269I | GAATGC | 1 cut(s) | 84 |
| NdeII | GATC | 2 cut(s) | 157, 179 |
| NheI | GCTAGC | 1 cut(s) | 256 |
| NlaIII | CATG | 1 cut(s) | 86 |
| NlaIV | GGNNCC | 1 cut(s) | 34 |
| NsiI | ATGCAT | 1 cut(s) | 84 |
| PctI | GAATGC | 1 cut(s) | 84 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PkrI | GCNGC | 1 cut(s) | 318 |
| PspN4I | GGNNCC | 1 cut(s) | 34 |
| PsuI | RGATCY | 1 cut(s) | 179 |
| RsaI | GTAC | 1 cut(s) | 211 |
| RsaNI | GTAC | 1 cut(s) | 210 |
| SaqAI | TTAA | 3 cut(s) | 26, 128, 294 |
| SatI | GCNGC | 1 cut(s) | 317 |
| Sau3AI | GATC | 2 cut(s) | 157, 179 |
| SduI | GDGCHC | 1 cut(s) | 143 |
| SetI | ASST | 6 cut(s) | 121, 204, 215, 258, 286, 318 |
| SfaNI | GCATC | 1 cut(s) | 269 |
| SfcI | CTRYAG | 1 cut(s) | 40 |
| SspMI | CTAG | 3 cut(s) | 53, 257, 320 |
| TaaI | ACNGT | 2 cut(s) | 14, 229 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| Tru1I | TTAA | 3 cut(s) | 26, 128, 294 |
| Tru9I | TTAA | 3 cut(s) | 26, 128, 294 |
| TscAI | CASTG | 1 cut(s) | 19 |
| TseI | GCWGC | 1 cut(s) | 316 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 19 |
| XspI | CTAG | 3 cut(s) | 53, 257, 320 |
| Zsp2I | ATGCAT | 1 cut(s) | 84 |