gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 87 |
| Acc36I | ACCTGC | 1 cut(s) | 391 |
| AclWI | GGATC | 2 cut(s) | 96, 371 |
| AcoI | YGGCCR | 1 cut(s) | 483 |
| AcsI | RAATTY | 1 cut(s) | 187 |
| AfaI | GTAC | 1 cut(s) | 275 |
| AgsI | TTSAA | 2 cut(s) | 52, 271 |
| AluBI | AGCT | 6 cut(s) | 178, 242, 343, 359, 439, 476 |
| AluI | AGCT | 6 cut(s) | 178, 242, 343, 359, 439, 476 |
| Alw21I | GWGCWC | 1 cut(s) | 345 |
| AlwI | GGATC | 2 cut(s) | 96, 371 |
| AoxI | GGCC | 1 cut(s) | 483 |
| ApeKI | GCWGC | 1 cut(s) | 476 |
| ApoI | RAATTY | 1 cut(s) | 187 |
| AsuII | TTCGAA | 1 cut(s) | 130 |
| AsuNHI | GCTAGC | 1 cut(s) | 178 |
| BalI | TGGCCA | 1 cut(s) | 485 |
| BanII | GRGCYC | 1 cut(s) | 345 |
| Bbv12I | GWGCWC | 1 cut(s) | 345 |
| BbvI | GCAGC | 1 cut(s) | 463 |
| BccI | CCATC | 1 cut(s) | 343 |
| BclI | TGATCA | 1 cut(s) | 315 |
| BfaI | CTAG | 4 cut(s) | 179, 243, 360, 496 |
| BfmI | CTRYAG | 2 cut(s) | 387, 477 |
| BfuAI | ACCTGC | 1 cut(s) | 391 |
| BisI | GCNGC | 1 cut(s) | 477 |
| BlsI | GCNGC | 1 cut(s) | 478 |
| BmsI | GCATC | 1 cut(s) | 191 |
| BmtI | GCTAGC | 1 cut(s) | 182 |
| Bpu10I | CCTNAGC | 1 cut(s) | 174 |
| Bpu14I | TTCGAA | 1 cut(s) | 130 |
| BpuEI | CTTGAG | 1 cut(s) | 425 |
| BsaJI | CCNNGG | 2 cut(s) | 252, 486 |
| BseDI | CCNNGG | 2 cut(s) | 252, 486 |
| BseMII | CTCAG | 2 cut(s) | 21, 165 |
| BseXI | GCAGC | 1 cut(s) | 463 |
| BshFI | GGCC | 1 cut(s) | 485 |
| BsiHKAI | GWGCWC | 1 cut(s) | 345 |
| BsnI | GGCC | 1 cut(s) | 485 |
| Bsp119I | TTCGAA | 1 cut(s) | 130 |
| Bsp1286I | GDGCHC | 1 cut(s) | 345 |
| Bsp143I | GATC | 4 cut(s) | 79, 101, 315, 363 |
| BspANI | GGCC | 1 cut(s) | 485 |
| BspCNI | CTCAG | 2 cut(s) | 22, 166 |
| BspHI | TCATGA | 1 cut(s) | 262 |
| BspMAI | CTGCAG | 1 cut(s) | 481 |
| BspMI | ACCTGC | 1 cut(s) | 391 |
| BspOI | GCTAGC | 1 cut(s) | 182 |
| BspPI | GGATC | 2 cut(s) | 96, 371 |
| BspQI | GCTCTTC | 1 cut(s) | 162 |
| BspT104I | TTCGAA | 1 cut(s) | 130 |
| BssECI | CCNNGG | 2 cut(s) | 252, 486 |
| BssMI | GATC | 4 cut(s) | 79, 101, 315, 363 |
| BssT1I | CCWWGG | 2 cut(s) | 252, 486 |
| Bst4CI | ACNGT | 1 cut(s) | 151 |
| Bst6I | CTCTTC | 1 cut(s) | 162 |
| BstBI | TTCGAA | 1 cut(s) | 130 |
| BstC8I | GCNNGC | 2 cut(s) | 42, 180 |
| BstDEI | CTNAG | 8 cut(s) | 30, 117, 144, 174, 210, 335, 414, 462 |
| BstKTI | GATC | 4 cut(s) | 82, 104, 318, 366 |
| BstMBI | GATC | 4 cut(s) | 79, 101, 315, 363 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 239, 482 |
| BstSFI | CTRYAG | 2 cut(s) | 387, 477 |
| BstV1I | GCAGC | 1 cut(s) | 463 |
| BstX2I | RGATCY | 1 cut(s) | 101 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 112 |
| BstYI | RGATCY | 1 cut(s) | 101 |
| BsuRI | GGCC | 1 cut(s) | 485 |
| BtsI | GCAGTG | 1 cut(s) | 486 |
| BtsIMutI | CAGTG | 1 cut(s) | 486 |
| BveI | ACCTGC | 1 cut(s) | 391 |
| Cac8I | GCNNGC | 2 cut(s) | 42, 180 |
| CciI | TCATGA | 1 cut(s) | 262 |
| Csp6I | GTAC | 1 cut(s) | 274 |
| CviAII | CATG | 3 cut(s) | 5, 263, 277 |
| CviQI | GTAC | 1 cut(s) | 274 |
| DdeI | CTNAG | 8 cut(s) | 30, 117, 144, 174, 210, 335, 414, 462 |
| DpnI | GATC | 4 cut(s) | 81, 103, 317, 365 |
| DpnII | GATC | 4 cut(s) | 79, 101, 315, 363 |
| DraI | TTTAAA | 1 cut(s) | 217 |
| EaeI | YGGCCR | 1 cut(s) | 483 |
| Eam1104I | CTCTTC | 1 cut(s) | 162 |
| EarI | CTCTTC | 1 cut(s) | 162 |
| Ecl136II | GAGCTC | 1 cut(s) | 343 |
| Eco130I | CCWWGG | 2 cut(s) | 252, 486 |
| Eco24I | GRGCYC | 1 cut(s) | 345 |
| Eco53kI | GAGCTC | 1 cut(s) | 343 |
| EcoICRI | GAGCTC | 1 cut(s) | 343 |
| EcoT14I | CCWWGG | 2 cut(s) | 252, 486 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 345 |
| ErhI | CCWWGG | 2 cut(s) | 252, 486 |
| FaeI | CATG | 3 cut(s) | 8, 266, 280 |
| FatI | CATG | 3 cut(s) | 4, 262, 276 |
| FbaI | TGATCA | 1 cut(s) | 315 |
| Fnu4HI | GCNGC | 1 cut(s) | 477 |
| FriOI | GRGCYC | 1 cut(s) | 345 |
| Fsp4HI | GCNGC | 1 cut(s) | 477 |
| FspBI | CTAG | 4 cut(s) | 179, 243, 360, 496 |
| GluI | GCNGC | 1 cut(s) | 477 |
| HaeIII | GGCC | 1 cut(s) | 485 |
| Hin1II | CATG | 3 cut(s) | 8, 266, 280 |
| Hpy188III | TCNNGA | 2 cut(s) | 263, 346 |
| HpyCH4III | ACNGT | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 44, 479 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 239, 482 |
| HpyF3I | CTNAG | 8 cut(s) | 30, 117, 144, 174, 210, 335, 414, 462 |
| Hsp92II | CATG | 3 cut(s) | 8, 266, 280 |
| Ksp22I | TGATCA | 1 cut(s) | 315 |
| Kzo9I | GATC | 4 cut(s) | 79, 101, 315, 363 |
| LguI | GCTCTTC | 1 cut(s) | 162 |
| LmnI | GCTCC | 1 cut(s) | 340 |
| LpnPI | CCDG | 5 cut(s) | 54, 139, 186, 396, 443 |
| Lsp1109I | GCAGC | 1 cut(s) | 463 |
| LweI | GCATC | 1 cut(s) | 191 |
| MaeI | CTAG | 4 cut(s) | 179, 243, 360, 496 |
| MalI | GATC | 4 cut(s) | 81, 103, 317, 365 |
| MboI | GATC | 4 cut(s) | 79, 101, 315, 363 |
| MboII | GAAGA | 4 cut(s) | 179, 322, 383, 430 |
| MflI | RGATCY | 1 cut(s) | 101 |
| MhlI | GDGCHC | 1 cut(s) | 345 |
| MlsI | TGGCCA | 1 cut(s) | 485 |
| MluCI | AATT | 1 cut(s) | 187 |
| MluNI | TGGCCA | 1 cut(s) | 485 |
| MnlI | CCTC | 3 cut(s) | 25, 134, 410 |
| Mox20I | TGGCCA | 1 cut(s) | 485 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MscI | TGGCCA | 1 cut(s) | 485 |
| MseI | TTAA | 2 cut(s) | 216, 470 |
| Msp20I | TGGCCA | 1 cut(s) | 485 |
| MspA1I | CMGCKG | 1 cut(s) | 476 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 239, 482 |
| NdeII | GATC | 4 cut(s) | 79, 101, 315, 363 |
| NheI | GCTAGC | 1 cut(s) | 178 |
| NlaIII | CATG | 3 cut(s) | 8, 266, 280 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspV | TTCGAA | 1 cut(s) | 130 |
| PagI | TCATGA | 1 cut(s) | 262 |
| PciSI | GCTCTTC | 1 cut(s) | 162 |
| PkrI | GCNGC | 1 cut(s) | 478 |
| PsiI | TTATAA | 1 cut(s) | 87 |
| Psp124BI | GAGCTC | 1 cut(s) | 345 |
| PstI | CTGCAG | 1 cut(s) | 481 |
| PsuI | RGATCY | 1 cut(s) | 101 |
| PvuII | CAGCTG | 1 cut(s) | 476 |
| RsaI | GTAC | 1 cut(s) | 275 |
| RsaNI | GTAC | 1 cut(s) | 274 |
| SacI | GAGCTC | 1 cut(s) | 345 |
| SapI | GCTCTTC | 1 cut(s) | 162 |
| SaqAI | TTAA | 2 cut(s) | 216, 470 |
| SatI | GCNGC | 1 cut(s) | 477 |
| Sau3AI | GATC | 4 cut(s) | 79, 101, 315, 363 |
| SduI | GDGCHC | 1 cut(s) | 345 |
| SfaNI | GCATC | 1 cut(s) | 191 |
| SfcI | CTRYAG | 2 cut(s) | 387, 477 |
| SfuI | TTCGAA | 1 cut(s) | 130 |
| SmlI | CTYRAG | 1 cut(s) | 440 |
| SmoI | CTYRAG | 1 cut(s) | 440 |
| Sse9I | AATT | 1 cut(s) | 187 |
| SspMI | CTAG | 4 cut(s) | 179, 243, 360, 496 |
| SstI | GAGCTC | 1 cut(s) | 345 |
| StyI | CCWWGG | 2 cut(s) | 252, 486 |
| TaaI | ACNGT | 1 cut(s) | 151 |
| TaqI | TCGA | 1 cut(s) | 130 |
| TasI | AATT | 1 cut(s) | 187 |
| TatI | WGTACW | 1 cut(s) | 273 |
| Tru1I | TTAA | 2 cut(s) | 216, 470 |
| Tru9I | TTAA | 2 cut(s) | 216, 470 |
| TscAI | CASTG | 1 cut(s) | 486 |
| TseI | GCWGC | 1 cut(s) | 476 |
| TspDTI | ATGAA | 3 cut(s) | 21, 251, 323 |
| TspRI | CASTG | 1 cut(s) | 486 |
| XapI | RAATTY | 1 cut(s) | 187 |
| XspI | CTAG | 4 cut(s) | 179, 243, 360, 496 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |