gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 145 |
| Acc36I | ACCTGC | 1 cut(s) | 145 |
| AccI | GTMKAC | 1 cut(s) | 108 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 47, 169 |
| AjnI | CCWGG | 1 cut(s) | 162 |
| AluBI | AGCT | 2 cut(s) | 14, 156 |
| AluI | AGCT | 2 cut(s) | 14, 156 |
| ApeKI | GCWGC | 1 cut(s) | 128 |
| AseI | ATTAAT | 1 cut(s) | 96 |
| AspS9I | GGNCC | 1 cut(s) | 160 |
| AsuHPI | GGTGA | 1 cut(s) | 136 |
| AvaII | GGWCC | 1 cut(s) | 160 |
| BbvI | GCAGC | 1 cut(s) | 115 |
| BciT130I | CCWGG | 1 cut(s) | 164 |
| BfuAI | ACCTGC | 1 cut(s) | 145 |
| BglII | AGATCT | 1 cut(s) | 82 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| Bme1390I | CCNGG | 1 cut(s) | 164 |
| Bme18I | GGWCC | 1 cut(s) | 160 |
| BmgT120I | GGNCC | 1 cut(s) | 160 |
| BmrFI | CCNGG | 1 cut(s) | 164 |
| BmrI | ACTGGG | 1 cut(s) | 121 |
| BmsI | GCATC | 1 cut(s) | 33 |
| BmuI | ACTGGG | 1 cut(s) | 121 |
| BsaJI | CCNNGG | 1 cut(s) | 43 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 47, 169 |
| Bse1I | ACTGG | 1 cut(s) | 116 |
| BseBI | CCWGG | 1 cut(s) | 164 |
| BseDI | CCNNGG | 1 cut(s) | 43 |
| BseGI | GGATG | 1 cut(s) | 24 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 47, 169 |
| BseNI | ACTGG | 1 cut(s) | 116 |
| BseXI | GCAGC | 1 cut(s) | 115 |
| BsgI | GTGCAG | 2 cut(s) | 114, 123 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 47, 169 |
| Bsp143I | GATC | 1 cut(s) | 82 |
| BspMI | ACCTGC | 1 cut(s) | 145 |
| BsrI | ACTGG | 1 cut(s) | 116 |
| BssECI | CCNNGG | 1 cut(s) | 43 |
| BssMI | GATC | 1 cut(s) | 82 |
| Bst2UI | CCWGG | 1 cut(s) | 164 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 137 |
| BstF5I | GGATG | 1 cut(s) | 24 |
| BstKTI | GATC | 1 cut(s) | 85 |
| BstMBI | GATC | 1 cut(s) | 82 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 137 |
| BstNI | CCWGG | 1 cut(s) | 164 |
| BstSCI | CCNGG | 1 cut(s) | 162 |
| BstV1I | GCAGC | 1 cut(s) | 115 |
| BstX2I | RGATCY | 1 cut(s) | 82 |
| BstYI | RGATCY | 1 cut(s) | 82 |
| BtsCI | GGATG | 1 cut(s) | 24 |
| BveI | ACCTGC | 1 cut(s) | 145 |
| Cfr13I | GGNCC | 1 cut(s) | 160 |
| CviAII | CATG | 1 cut(s) | 7 |
| CviJI | RGCY | 4 cut(s) | 14, 128, 156, 173 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 128, 156, 173 |
| DpnI | GATC | 1 cut(s) | 84 |
| DpnII | GATC | 1 cut(s) | 82 |
| Eco47I | GGWCC | 1 cut(s) | 160 |
| EcoRII | CCWGG | 1 cut(s) | 162 |
| FaeI | CATG | 1 cut(s) | 10 |
| FaiI | YATR | 4 cut(s) | 8, 35, 60, 80 |
| FatI | CATG | 1 cut(s) | 6 |
| FblI | GTMKAC | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| FokI | GGATG | 1 cut(s) | 11 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| GluI | GCNGC | 1 cut(s) | 129 |
| Hin1II | CATG | 1 cut(s) | 10 |
| HinfI | GANTC | 1 cut(s) | 204 |
| HphI | GGTGA | 1 cut(s) | 136 |
| Hpy166II | GTNNAC | 1 cut(s) | 109 |
| Hpy188I | TCNGA | 1 cut(s) | 160 |
| Hpy8I | GTNNAC | 1 cut(s) | 109 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 2 cut(s) | 131, 140 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 137 |
| Hsp92II | CATG | 1 cut(s) | 10 |
| Kzo9I | GATC | 1 cut(s) | 82 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 4 cut(s) | 97, 149, 150, 176 |
| Lsp1109I | GCAGC | 1 cut(s) | 115 |
| LweI | GCATC | 1 cut(s) | 33 |
| MalI | GATC | 1 cut(s) | 84 |
| MboI | GATC | 1 cut(s) | 82 |
| MflI | RGATCY | 1 cut(s) | 82 |
| MluCI | AATT | 1 cut(s) | 36 |
| MnlI | CCTC | 3 cut(s) | 53, 63, 67 |
| MseI | TTAA | 1 cut(s) | 96 |
| MspR9I | CCNGG | 1 cut(s) | 164 |
| MvaI | CCWGG | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 137 |
| NdeII | GATC | 1 cut(s) | 82 |
| NlaIII | CATG | 1 cut(s) | 10 |
| PaqCI | CACCTGC | 1 cut(s) | 145 |
| PfeI | GAWTC | 1 cut(s) | 204 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| PshBI | ATTAAT | 1 cut(s) | 96 |
| Psp6I | CCWGG | 1 cut(s) | 162 |
| PspGI | CCWGG | 1 cut(s) | 162 |
| PspPI | GGNCC | 1 cut(s) | 160 |
| PsuI | RGATCY | 1 cut(s) | 82 |
| SaqAI | TTAA | 1 cut(s) | 96 |
| SatI | GCNGC | 1 cut(s) | 129 |
| Sau3AI | GATC | 1 cut(s) | 82 |
| Sau96I | GGNCC | 1 cut(s) | 160 |
| ScrFI | CCNGG | 1 cut(s) | 164 |
| SetI | ASST | 4 cut(s) | 16, 139, 158, 214 |
| SfaNI | GCATC | 1 cut(s) | 33 |
| SgeI | CNNG | 8 cut(s) | 19, 56, 124, 149, 169, 175, 176, 181 |
| SinI | GGWCC | 1 cut(s) | 160 |
| Sse9I | AATT | 1 cut(s) | 36 |
| StyD4I | CCNGG | 1 cut(s) | 162 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TasI | AATT | 1 cut(s) | 36 |
| TfiI | GAWTC | 1 cut(s) | 204 |
| Tru1I | TTAA | 1 cut(s) | 96 |
| Tru9I | TTAA | 1 cut(s) | 96 |
| TseI | GCWGC | 1 cut(s) | 128 |
| TspDTI | ATGAA | 3 cut(s) | 17, 82, 165 |
| VpaK11BI | GGWCC | 1 cut(s) | 160 |
| VspI | ATTAAT | 1 cut(s) | 96 |
| XmiI | GTMKAC | 1 cut(s) | 108 |