gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 177 |
| AcoI | YGGCCR | 1 cut(s) | 267 |
| AcsI | RAATTY | 1 cut(s) | 365 |
| AfaI | GTAC | 2 cut(s) | 109, 217 |
| AgsI | TTSAA | 1 cut(s) | 224 |
| AluBI | AGCT | 4 cut(s) | 239, 245, 386, 392 |
| AluI | AGCT | 4 cut(s) | 239, 245, 386, 392 |
| AlwI | GGATC | 1 cut(s) | 177 |
| AoxI | GGCC | 1 cut(s) | 267 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| ApoI | RAATTY | 1 cut(s) | 365 |
| BalI | TGGCCA | 1 cut(s) | 269 |
| BbvI | GCAGC | 1 cut(s) | 22 |
| BccI | CCATC | 1 cut(s) | 259 |
| BfaI | CTAG | 1 cut(s) | 240 |
| BfmI | CTRYAG | 1 cut(s) | 354 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| BmcAI | AGTACT | 1 cut(s) | 217 |
| BmiI | GGNNCC | 1 cut(s) | 324 |
| BmsI | GCATC | 1 cut(s) | 144 |
| BseGI | GGATG | 1 cut(s) | 270 |
| BseRI | GAGGAG | 2 cut(s) | 142, 335 |
| BseXI | GCAGC | 1 cut(s) | 22 |
| BshFI | GGCC | 1 cut(s) | 269 |
| BsnI | GGCC | 1 cut(s) | 269 |
| Bsp143I | GATC | 1 cut(s) | 169 |
| BspANI | GGCC | 1 cut(s) | 269 |
| BspLI | GGNNCC | 1 cut(s) | 324 |
| BspPI | GGATC | 1 cut(s) | 177 |
| BssMI | GATC | 1 cut(s) | 169 |
| Bst4CI | ACNGT | 2 cut(s) | 220, 304 |
| Bst6I | CTCTTC | 1 cut(s) | 219 |
| BstC8I | GCNNGC | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 270 |
| BstKTI | GATC | 1 cut(s) | 172 |
| BstMBI | GATC | 1 cut(s) | 169 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 44 |
| BstSFI | CTRYAG | 1 cut(s) | 354 |
| BstV1I | GCAGC | 1 cut(s) | 22 |
| BstX2I | RGATCY | 1 cut(s) | 169 |
| BstYI | RGATCY | 1 cut(s) | 169 |
| BsuRI | GGCC | 1 cut(s) | 269 |
| BtsCI | GGATG | 1 cut(s) | 270 |
| BtsIMutI | CAGTG | 3 cut(s) | 180, 309, 336 |
| Cac8I | GCNNGC | 1 cut(s) | 14 |
| Csp6I | GTAC | 2 cut(s) | 108, 216 |
| CviAII | CATG | 3 cut(s) | 158, 292, 396 |
| CviQI | GTAC | 2 cut(s) | 108, 216 |
| DpnI | GATC | 1 cut(s) | 171 |
| DpnII | GATC | 1 cut(s) | 169 |
| EaeI | YGGCCR | 1 cut(s) | 267 |
| Eam1104I | CTCTTC | 1 cut(s) | 219 |
| EarI | CTCTTC | 1 cut(s) | 219 |
| EcoT22I | ATGCAT | 1 cut(s) | 159 |
| FaeI | CATG | 3 cut(s) | 161, 295, 399 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 54, 86 |
| FatI | CATG | 3 cut(s) | 157, 291, 395 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| FokI | GGATG | 1 cut(s) | 277 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| FspBI | CTAG | 1 cut(s) | 240 |
| GluI | GCNGC | 1 cut(s) | 36 |
| HaeIII | GGCC | 1 cut(s) | 269 |
| Hin1II | CATG | 3 cut(s) | 161, 295, 399 |
| HinfI | GANTC | 2 cut(s) | 79, 97 |
| Hpy166II | GTNNAC | 1 cut(s) | 134 |
| Hpy188I | TCNGA | 4 cut(s) | 84, 96, 102, 298 |
| Hpy8I | GTNNAC | 1 cut(s) | 134 |
| HpyAV | CCTTC | 1 cut(s) | 56 |
| HpyCH4III | ACNGT | 2 cut(s) | 220, 304 |
| HpyCH4V | TGCA | 1 cut(s) | 157 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 44 |
| Hsp92II | CATG | 3 cut(s) | 161, 295, 399 |
| Kzo9I | GATC | 1 cut(s) | 169 |
| LmnI | GCTCC | 1 cut(s) | 322 |
| LpnPI | CCDG | 3 cut(s) | 207, 247, 339 |
| Lsp1109I | GCAGC | 1 cut(s) | 22 |
| LweI | GCATC | 1 cut(s) | 144 |
| MaeI | CTAG | 1 cut(s) | 240 |
| MalI | GATC | 1 cut(s) | 171 |
| MboI | GATC | 1 cut(s) | 169 |
| MboII | GAAGA | 1 cut(s) | 236 |
| MflI | RGATCY | 1 cut(s) | 169 |
| MlsI | TGGCCA | 1 cut(s) | 269 |
| MluCI | AATT | 2 cut(s) | 329, 365 |
| MluNI | TGGCCA | 1 cut(s) | 269 |
| MnlI | CCTC | 4 cut(s) | 120, 302, 313, 343 |
| Mox20I | TGGCCA | 1 cut(s) | 269 |
| Mph1103I | ATGCAT | 1 cut(s) | 159 |
| MscI | TGGCCA | 1 cut(s) | 269 |
| MseI | TTAA | 3 cut(s) | 149, 203, 369 |
| Msp20I | TGGCCA | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 44 |
| NdeII | GATC | 1 cut(s) | 169 |
| NlaIII | CATG | 3 cut(s) | 161, 295, 399 |
| NlaIV | GGNNCC | 1 cut(s) | 324 |
| NsiI | ATGCAT | 1 cut(s) | 159 |
| PfeI | GAWTC | 2 cut(s) | 79, 97 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| PspN4I | GGNNCC | 1 cut(s) | 324 |
| PsuI | RGATCY | 1 cut(s) | 169 |
| RsaI | GTAC | 2 cut(s) | 109, 217 |
| RsaNI | GTAC | 2 cut(s) | 108, 216 |
| SaqAI | TTAA | 3 cut(s) | 149, 203, 369 |
| SatI | GCNGC | 1 cut(s) | 36 |
| Sau3AI | GATC | 1 cut(s) | 169 |
| ScaI | AGTACT | 1 cut(s) | 217 |
| SetI | ASST | 7 cut(s) | 26, 196, 241, 247, 313, 388, 394 |
| SfaNI | GCATC | 1 cut(s) | 144 |
| SfcI | CTRYAG | 1 cut(s) | 354 |
| Sse9I | AATT | 2 cut(s) | 329, 365 |
| SspMI | CTAG | 1 cut(s) | 240 |
| TaaI | ACNGT | 2 cut(s) | 220, 304 |
| TaqI | TCGA | 1 cut(s) | 138 |
| TasI | AATT | 2 cut(s) | 329, 365 |
| TatI | WGTACW | 1 cut(s) | 215 |
| TfiI | GAWTC | 2 cut(s) | 79, 97 |
| Tru1I | TTAA | 3 cut(s) | 149, 203, 369 |
| Tru9I | TTAA | 3 cut(s) | 149, 203, 369 |
| TscAI | CASTG | 3 cut(s) | 187, 309, 343 |
| TseI | GCWGC | 1 cut(s) | 35 |
| TspDTI | ATGAA | 2 cut(s) | 17, 92 |
| TspRI | CASTG | 3 cut(s) | 187, 309, 343 |
| XapI | RAATTY | 1 cut(s) | 365 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 343 |
| XspI | CTAG | 1 cut(s) | 240 |
| ZrmI | AGTACT | 1 cut(s) | 217 |
| Zsp2I | ATGCAT | 1 cut(s) | 159 |