gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 137, 210 |
| AcsI | RAATTY | 2 cut(s) | 227, 385 |
| AgsI | TTSAA | 3 cut(s) | 73, 280, 319 |
| AluBI | AGCT | 1 cut(s) | 325 |
| AluI | AGCT | 1 cut(s) | 325 |
| AlwI | GGATC | 2 cut(s) | 137, 210 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 47 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApeKI | GCWGC | 1 cut(s) | 59 |
| ApoI | RAATTY | 2 cut(s) | 227, 385 |
| AsuHPI | GGTGA | 1 cut(s) | 178 |
| BbsI | GAAGAC | 1 cut(s) | 287 |
| BbvI | GCAGC | 1 cut(s) | 46 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 322, 356 |
| BfaI | CTAG | 1 cut(s) | 192 |
| BisI | GCNGC | 1 cut(s) | 60 |
| BlsI | GCNGC | 1 cut(s) | 61 |
| BmsI | GCATC | 1 cut(s) | 247 |
| BpiI | GAAGAC | 1 cut(s) | 287 |
| BpmI | CTGGAG | 1 cut(s) | 227 |
| BseGI | GGATG | 2 cut(s) | 363, 373 |
| BseMII | CTCAG | 1 cut(s) | 39 |
| BseXI | GCAGC | 1 cut(s) | 46 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BslFI | GGGAC | 1 cut(s) | 229 |
| BsmFI | GGGAC | 1 cut(s) | 229 |
| BsnI | GGCC | 1 cut(s) | 95 |
| Bsp143I | GATC | 3 cut(s) | 129, 202, 390 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BspCNI | CTCAG | 1 cut(s) | 40 |
| BspPI | GGATC | 2 cut(s) | 137, 210 |
| BssMI | GATC | 3 cut(s) | 129, 202, 390 |
| Bst6I | CTCTTC | 2 cut(s) | 111, 356 |
| BstC8I | GCNNGC | 1 cut(s) | 222 |
| BstDEI | CTNAG | 3 cut(s) | 48, 147, 248 |
| BstF5I | GGATG | 2 cut(s) | 363, 373 |
| BstKTI | GATC | 3 cut(s) | 132, 205, 393 |
| BstMBI | GATC | 3 cut(s) | 129, 202, 390 |
| BstV1I | GCAGC | 1 cut(s) | 46 |
| BstV2I | GAAGAC | 1 cut(s) | 287 |
| BstX2I | RGATCY | 1 cut(s) | 202 |
| BstYI | RGATCY | 1 cut(s) | 202 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtsCI | GGATG | 2 cut(s) | 363, 373 |
| BtsIMutI | CAGTG | 1 cut(s) | 45 |
| Cac8I | GCNNGC | 1 cut(s) | 222 |
| CaiI | CAGNNNCTG | 1 cut(s) | 47 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 178, 213 |
| CviJI | RGCY | 5 cut(s) | 44, 59, 95, 196, 325 |
| CviKI_1 | RGCY | 5 cut(s) | 44, 59, 95, 196, 325 |
| DdeI | CTNAG | 3 cut(s) | 48, 147, 248 |
| DpnI | GATC | 3 cut(s) | 131, 204, 392 |
| DpnII | GATC | 3 cut(s) | 129, 202, 390 |
| Eam1104I | CTCTTC | 2 cut(s) | 111, 356 |
| EarI | CTCTTC | 2 cut(s) | 111, 356 |
| FaiI | YATR | 7 cut(s) | 56, 119, 138, 165, 170, 233, 337 |
| FaqI | GGGAC | 1 cut(s) | 229 |
| Fnu4HI | GCNGC | 1 cut(s) | 60 |
| FokI | GGATG | 2 cut(s) | 370, 380 |
| Fsp4HI | GCNGC | 1 cut(s) | 60 |
| FspBI | CTAG | 1 cut(s) | 192 |
| GluI | GCNGC | 1 cut(s) | 60 |
| GsuI | CTGGAG | 1 cut(s) | 227 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| HinfI | GANTC | 1 cut(s) | 140 |
| HphI | GGTGA | 1 cut(s) | 178 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 206 |
| HpyAV | CCTTC | 2 cut(s) | 85, 295 |
| HpyCH4V | TGCA | 2 cut(s) | 238, 343 |
| HpyF3I | CTNAG | 3 cut(s) | 48, 147, 248 |
| Kzo9I | GATC | 3 cut(s) | 129, 202, 390 |
| LpnPI | CCDG | 3 cut(s) | 191, 230, 234 |
| Lsp1109I | GCAGC | 1 cut(s) | 46 |
| LweI | GCATC | 1 cut(s) | 247 |
| MaeI | CTAG | 1 cut(s) | 192 |
| MalI | GATC | 3 cut(s) | 131, 204, 392 |
| MboI | GATC | 3 cut(s) | 129, 202, 390 |
| MboII | GAAGA | 4 cut(s) | 98, 292, 362, 373 |
| MflI | RGATCY | 1 cut(s) | 202 |
| MluCI | AATT | 3 cut(s) | 133, 227, 385 |
| MmeI | TCCRAC | 1 cut(s) | 93 |
| MnlI | CCTC | 4 cut(s) | 154, 274, 340, 357 |
| MseI | TTAA | 1 cut(s) | 122 |
| NdeII | GATC | 3 cut(s) | 129, 202, 390 |
| NmeAIII | GCCGAG | 1 cut(s) | 121 |
| PfeI | GAWTC | 1 cut(s) | 140 |
| PkrI | GCNGC | 1 cut(s) | 61 |
| PstNI | CAGNNNCTG | 1 cut(s) | 47 |
| PsuI | RGATCY | 1 cut(s) | 202 |
| SaqAI | TTAA | 1 cut(s) | 122 |
| SatI | GCNGC | 1 cut(s) | 60 |
| Sau3AI | GATC | 3 cut(s) | 129, 202, 390 |
| SetI | ASST | 4 cut(s) | 71, 177, 257, 327 |
| SfaNI | GCATC | 1 cut(s) | 247 |
| Sse9I | AATT | 3 cut(s) | 133, 227, 385 |
| SspMI | CTAG | 1 cut(s) | 192 |
| TaqI | TCGA | 1 cut(s) | 79 |
| TasI | AATT | 3 cut(s) | 133, 227, 385 |
| TfiI | GAWTC | 1 cut(s) | 140 |
| Tru1I | TTAA | 1 cut(s) | 122 |
| Tru9I | TTAA | 1 cut(s) | 122 |
| TscAI | CASTG | 1 cut(s) | 52 |
| TseI | GCWGC | 1 cut(s) | 59 |
| TspDTI | ATGAA | 2 cut(s) | 374, 384 |
| TspRI | CASTG | 1 cut(s) | 52 |
| XapI | RAATTY | 2 cut(s) | 227, 385 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 52 |
| XspI | CTAG | 1 cut(s) | 192 |