gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 136 |
| AcsI | RAATTY | 2 cut(s) | 13, 296 |
| AcuI | CTGAAG | 1 cut(s) | 339 |
| AfaI | GTAC | 1 cut(s) | 367 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 16 |
| AflIII | ACRYGT | 1 cut(s) | 333 |
| AgsI | TTSAA | 3 cut(s) | 280, 290, 427 |
| AjnI | CCWGG | 1 cut(s) | 210 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 245, 277 |
| AluBI | AGCT | 2 cut(s) | 155, 317 |
| AluI | AGCT | 2 cut(s) | 155, 317 |
| Alw26I | GTCTC | 1 cut(s) | 342 |
| ApoI | RAATTY | 2 cut(s) | 13, 296 |
| AspS9I | GGNCC | 1 cut(s) | 382 |
| AvaII | GGWCC | 1 cut(s) | 382 |
| BccI | CCATC | 1 cut(s) | 140 |
| BciT130I | CCWGG | 1 cut(s) | 212 |
| BclI | TGATCA | 1 cut(s) | 139 |
| BcoDI | GTCTC | 1 cut(s) | 342 |
| BfuAI | ACCTGC | 1 cut(s) | 136 |
| Bme1390I | CCNGG | 1 cut(s) | 212 |
| Bme18I | GGWCC | 1 cut(s) | 382 |
| BmgT120I | GGNCC | 1 cut(s) | 382 |
| BmiI | GGNNCC | 1 cut(s) | 383 |
| BmrFI | CCNGG | 1 cut(s) | 212 |
| BmsI | GCATC | 1 cut(s) | 395 |
| Bsa29I | ATCGAT | 2 cut(s) | 399, 403 |
| BsaAI | YACGTR | 1 cut(s) | 334 |
| BsaJI | CCNNGG | 1 cut(s) | 238 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 16 |
| Bse1I | ACTGG | 2 cut(s) | 43, 373 |
| BseBI | CCWGG | 1 cut(s) | 212 |
| BseCI | ATCGAT | 2 cut(s) | 399, 403 |
| BseDI | CCNNGG | 1 cut(s) | 238 |
| BseGI | GGATG | 1 cut(s) | 437 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 16 |
| BseNI | ACTGG | 2 cut(s) | 43, 373 |
| Bsh1285I | CGRYCG | 1 cut(s) | 403 |
| BshVI | ATCGAT | 2 cut(s) | 399, 403 |
| BsiEI | CGRYCG | 1 cut(s) | 403 |
| BslFI | GGGAC | 2 cut(s) | 83, 395 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 16 |
| BsmAI | GTCTC | 1 cut(s) | 342 |
| BsmFI | GGGAC | 2 cut(s) | 83, 395 |
| BsmI | GAATGC | 1 cut(s) | 286 |
| Bsp143I | GATC | 4 cut(s) | 6, 139, 396, 400 |
| BspDI | ATCGAT | 2 cut(s) | 399, 403 |
| BspLI | GGNNCC | 1 cut(s) | 383 |
| BspMI | ACCTGC | 1 cut(s) | 136 |
| BsrI | ACTGG | 2 cut(s) | 43, 373 |
| BssECI | CCNNGG | 1 cut(s) | 238 |
| BssMI | GATC | 4 cut(s) | 6, 139, 396, 400 |
| BssT1I | CCWWGG | 1 cut(s) | 238 |
| Bst2UI | CCWGG | 1 cut(s) | 212 |
| BstBAI | YACGTR | 1 cut(s) | 334 |
| BstF5I | GGATG | 1 cut(s) | 437 |
| BstKTI | GATC | 4 cut(s) | 9, 142, 399, 403 |
| BstMAI | GTCTC | 1 cut(s) | 342 |
| BstMBI | GATC | 4 cut(s) | 6, 139, 396, 400 |
| BstMCI | CGRYCG | 1 cut(s) | 403 |
| BstNI | CCWGG | 1 cut(s) | 212 |
| BstSCI | CCNGG | 1 cut(s) | 210 |
| BstX2I | RGATCY | 1 cut(s) | 6 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 196 |
| BstYI | RGATCY | 1 cut(s) | 6 |
| Bsu15I | ATCGAT | 2 cut(s) | 399, 403 |
| BsuTUI | ATCGAT | 2 cut(s) | 399, 403 |
| BtsCI | GGATG | 1 cut(s) | 437 |
| BtsIMutI | CAGTG | 2 cut(s) | 36, 135 |
| BveI | ACCTGC | 1 cut(s) | 136 |
| Cfr13I | GGNCC | 1 cut(s) | 382 |
| ClaI | ATCGAT | 2 cut(s) | 399, 403 |
| Csp6I | GTAC | 1 cut(s) | 366 |
| CviAII | CATG | 1 cut(s) | 257 |
| CviJI | RGCY | 5 cut(s) | 20, 155, 188, 266, 317 |
| CviKI_1 | RGCY | 5 cut(s) | 20, 155, 188, 266, 317 |
| CviQI | GTAC | 1 cut(s) | 366 |
| DpnI | GATC | 4 cut(s) | 8, 141, 398, 402 |
| DpnII | GATC | 4 cut(s) | 6, 139, 396, 400 |
| DraI | TTTAAA | 1 cut(s) | 301 |
| Eco130I | CCWWGG | 1 cut(s) | 238 |
| Eco47I | GGWCC | 1 cut(s) | 382 |
| Eco57I | CTGAAG | 1 cut(s) | 339 |
| EcoRII | CCWGG | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 1 cut(s) | 238 |
| ErhI | CCWWGG | 1 cut(s) | 238 |
| FaeI | CATG | 1 cut(s) | 260 |
| FaiI | YATR | 7 cut(s) | 107, 224, 233, 258, 352, 377, 392 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 186, 218 |
| FaqI | GGGAC | 2 cut(s) | 83, 395 |
| FatI | CATG | 1 cut(s) | 256 |
| FbaI | TGATCA | 1 cut(s) | 139 |
| Hin1II | CATG | 1 cut(s) | 260 |
| HinfI | GANTC | 3 cut(s) | 246, 305, 325 |
| Hpy166II | GTNNAC | 1 cut(s) | 437 |
| Hpy188I | TCNGA | 1 cut(s) | 310 |
| Hpy188III | TCNNGA | 2 cut(s) | 250, 343 |
| Hpy8I | GTNNAC | 1 cut(s) | 437 |
| HpyAV | CCTTC | 2 cut(s) | 60, 171 |
| HpyCH4IV | ACGT | 1 cut(s) | 333 |
| HpyCH4V | TGCA | 2 cut(s) | 284, 350 |
| HpySE526I | ACGT | 1 cut(s) | 333 |
| Hsp92II | CATG | 1 cut(s) | 260 |
| Ksp22I | TGATCA | 1 cut(s) | 139 |
| Kzo9I | GATC | 4 cut(s) | 6, 139, 396, 400 |
| LpnPI | CCDG | 6 cut(s) | 24, 141, 163, 197, 224, 354 |
| LweI | GCATC | 1 cut(s) | 395 |
| MaeII | ACGT | 1 cut(s) | 333 |
| MalI | GATC | 4 cut(s) | 8, 141, 398, 402 |
| MboI | GATC | 4 cut(s) | 6, 139, 396, 400 |
| MboII | GAAGA | 2 cut(s) | 16, 406 |
| MfeI | CAATTG | 2 cut(s) | 285, 422 |
| MflI | RGATCY | 1 cut(s) | 6 |
| MluCI | AATT | 6 cut(s) | 13, 49, 111, 285, 296, 422 |
| MlyI | GAGTC | 1 cut(s) | 334 |
| MnlI | CCTC | 3 cut(s) | 44, 236, 355 |
| MseI | TTAA | 2 cut(s) | 86, 300 |
| MspR9I | CCNGG | 1 cut(s) | 212 |
| MunI | CAATTG | 2 cut(s) | 285, 422 |
| Mva1269I | GAATGC | 1 cut(s) | 286 |
| MvaI | CCWGG | 1 cut(s) | 212 |
| NdeII | GATC | 4 cut(s) | 6, 139, 396, 400 |
| NlaIII | CATG | 1 cut(s) | 260 |
| NlaIV | GGNNCC | 1 cut(s) | 383 |
| PctI | GAATGC | 1 cut(s) | 286 |
| PfeI | GAWTC | 2 cut(s) | 246, 305 |
| PfoI | TCCNGGA | 1 cut(s) | 210 |
| Ple19I | CGATCG | 1 cut(s) | 403 |
| PleI | GAGTC | 1 cut(s) | 333 |
| PpsI | GAGTC | 1 cut(s) | 333 |
| Ppu21I | YACGTR | 1 cut(s) | 334 |
| Psp6I | CCWGG | 1 cut(s) | 210 |
| PspGI | CCWGG | 1 cut(s) | 210 |
| PspN4I | GGNNCC | 1 cut(s) | 383 |
| PspPI | GGNCC | 1 cut(s) | 382 |
| PsuI | RGATCY | 1 cut(s) | 6 |
| PvuI | CGATCG | 1 cut(s) | 403 |
| RsaI | GTAC | 1 cut(s) | 367 |
| RsaNI | GTAC | 1 cut(s) | 366 |
| SaqAI | TTAA | 2 cut(s) | 86, 300 |
| Sau3AI | GATC | 4 cut(s) | 6, 139, 396, 400 |
| Sau96I | GGNCC | 1 cut(s) | 382 |
| SchI | GAGTC | 1 cut(s) | 334 |
| ScrFI | CCNGG | 1 cut(s) | 212 |
| SetI | ASST | 4 cut(s) | 130, 157, 319, 336 |
| SfaNI | GCATC | 1 cut(s) | 395 |
| SinI | GGWCC | 1 cut(s) | 382 |
| Sse9I | AATT | 6 cut(s) | 13, 49, 111, 285, 296, 422 |
| StyD4I | CCNGG | 1 cut(s) | 210 |
| StyI | CCWWGG | 1 cut(s) | 238 |
| TaiI | ACGT | 1 cut(s) | 336 |
| TaqI | TCGA | 2 cut(s) | 399, 403 |
| TasI | AATT | 6 cut(s) | 13, 49, 111, 285, 296, 422 |
| TfiI | GAWTC | 2 cut(s) | 246, 305 |
| Tru1I | TTAA | 2 cut(s) | 86, 300 |
| Tru9I | TTAA | 2 cut(s) | 86, 300 |
| TscAI | CASTG | 2 cut(s) | 43, 142 |
| TspDTI | ATGAA | 2 cut(s) | 17, 407 |
| TspRI | CASTG | 2 cut(s) | 43, 142 |
| VpaK11BI | GGWCC | 1 cut(s) | 382 |
| XapI | RAATTY | 2 cut(s) | 13, 296 |