gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 290 |
| AgsI | TTSAA | 1 cut(s) | 134 |
| AjnI | CCWGG | 1 cut(s) | 47 |
| AluBI | AGCT | 2 cut(s) | 146, 170 |
| AluI | AGCT | 2 cut(s) | 146, 170 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 317 |
| AoxI | GGCC | 1 cut(s) | 276 |
| ApoI | RAATTY | 1 cut(s) | 290 |
| AseI | ATTAAT | 1 cut(s) | 128 |
| BbvCI | CCTCAGC | 1 cut(s) | 147 |
| BciT130I | CCWGG | 1 cut(s) | 49 |
| BfaI | CTAG | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BmsI | GCATC | 3 cut(s) | 12, 69, 112 |
| BpmI | CTGGAG | 1 cut(s) | 70 |
| Bpu10I | CCTNAGC | 1 cut(s) | 147 |
| Bse1I | ACTGG | 1 cut(s) | 34 |
| BseBI | CCWGG | 1 cut(s) | 49 |
| BseGI | GGATG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 138 |
| BseNI | ACTGG | 1 cut(s) | 34 |
| BseRI | GAGGAG | 1 cut(s) | 164 |
| BshFI | GGCC | 1 cut(s) | 278 |
| BsnI | GGCC | 1 cut(s) | 278 |
| BspANI | GGCC | 1 cut(s) | 278 |
| BspCNI | CTCAG | 1 cut(s) | 139 |
| BspHI | TCATGA | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 34 |
| Bst2UI | CCWGG | 1 cut(s) | 49 |
| BstDEI | CTNAG | 1 cut(s) | 147 |
| BstF5I | GGATG | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 167 |
| BstNI | CCWGG | 1 cut(s) | 49 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BsuRI | GGCC | 1 cut(s) | 278 |
| BtsCI | GGATG | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 1 cut(s) | 27 |
| CaiI | CAGNNNCTG | 1 cut(s) | 317 |
| CciI | TCATGA | 1 cut(s) | 106 |
| CviAII | CATG | 2 cut(s) | 83, 107 |
| CviJI | RGCY | 6 cut(s) | 47, 146, 170, 260, 278, 317 |
| CviKI_1 | RGCY | 6 cut(s) | 47, 146, 170, 260, 278, 317 |
| DdeI | CTNAG | 1 cut(s) | 147 |
| DraI | TTTAAA | 2 cut(s) | 166, 295 |
| EcoRII | CCWGG | 1 cut(s) | 47 |
| EcoT22I | ATGCAT | 2 cut(s) | 84, 127 |
| FaeI | CATG | 2 cut(s) | 86, 110 |
| FaiI | YATR | 8 cut(s) | 72, 74, 84, 92, 108, 218, 270, 272 |
| FatI | CATG | 2 cut(s) | 82, 106 |
| FokI | GGATG | 1 cut(s) | 125 |
| FspBI | CTAG | 1 cut(s) | 98 |
| GsuI | CTGGAG | 1 cut(s) | 70 |
| HaeIII | GGCC | 1 cut(s) | 278 |
| Hin1II | CATG | 2 cut(s) | 86, 110 |
| HindIII | AAGCTT | 1 cut(s) | 168 |
| HinfI | GANTC | 1 cut(s) | 56 |
| Hpy188I | TCNGA | 1 cut(s) | 223 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| HpyAV | CCTTC | 1 cut(s) | 301 |
| HpyCH4V | TGCA | 2 cut(s) | 82, 125 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 167 |
| HpyF3I | CTNAG | 1 cut(s) | 147 |
| Hsp92II | CATG | 2 cut(s) | 86, 110 |
| LpnPI | CCDG | 4 cut(s) | 15, 34, 61, 132 |
| LweI | GCATC | 3 cut(s) | 12, 69, 112 |
| MaeI | CTAG | 1 cut(s) | 98 |
| MboII | GAAGA | 2 cut(s) | 146, 257 |
| MluCI | AATT | 2 cut(s) | 129, 290 |
| MnlI | CCTC | 7 cut(s) | 17, 103, 142, 145, 227, 268, 307 |
| Mph1103I | ATGCAT | 2 cut(s) | 84, 127 |
| MseI | TTAA | 4 cut(s) | 128, 156, 165, 294 |
| MslI | CAYNNNNRTG | 1 cut(s) | 111 |
| MspA1I | CMGCKG | 1 cut(s) | 146 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| MvaI | CCWGG | 1 cut(s) | 49 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 167 |
| NlaIII | CATG | 2 cut(s) | 86, 110 |
| NsiI | ATGCAT | 2 cut(s) | 84, 127 |
| PagI | TCATGA | 1 cut(s) | 106 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PflFI | GACNNNGTC | 1 cut(s) | 98 |
| PshBI | ATTAAT | 1 cut(s) | 128 |
| Psp6I | CCWGG | 1 cut(s) | 47 |
| PspGI | CCWGG | 1 cut(s) | 47 |
| PstNI | CAGNNNCTG | 1 cut(s) | 317 |
| PsyI | GACNNNGTC | 1 cut(s) | 98 |
| PvuII | CAGCTG | 1 cut(s) | 146 |
| RseI | CAYNNNNRTG | 1 cut(s) | 111 |
| SaqAI | TTAA | 4 cut(s) | 128, 156, 165, 294 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SetI | ASST | 9 cut(s) | 9, 99, 121, 148, 156, 172, 182, 238, 253 |
| SfaNI | GCATC | 3 cut(s) | 12, 69, 112 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 111 |
| Sse9I | AATT | 2 cut(s) | 129, 290 |
| SspMI | CTAG | 1 cut(s) | 98 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| TasI | AATT | 2 cut(s) | 129, 290 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| Tru1I | TTAA | 4 cut(s) | 128, 156, 165, 294 |
| Tru9I | TTAA | 4 cut(s) | 128, 156, 165, 294 |
| TscAI | CASTG | 1 cut(s) | 34 |
| TspDTI | ATGAA | 3 cut(s) | 17, 95, 129 |
| TspRI | CASTG | 1 cut(s) | 34 |
| Tth111I | GACNNNGTC | 1 cut(s) | 98 |
| VspI | ATTAAT | 1 cut(s) | 128 |
| XapI | RAATTY | 1 cut(s) | 290 |
| XspI | CTAG | 1 cut(s) | 98 |
| Zsp2I | ATGCAT | 2 cut(s) | 84, 127 |