gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 406 |
| AccI | GTMKAC | 1 cut(s) | 220 |
| AclWI | GGATC | 2 cut(s) | 466, 473 |
| AfaI | GTAC | 2 cut(s) | 190, 332 |
| AgsI | TTSAA | 4 cut(s) | 109, 253, 328, 570 |
| AluBI | AGCT | 6 cut(s) | 26, 235, 299, 391, 454, 538 |
| AluI | AGCT | 6 cut(s) | 26, 235, 299, 391, 454, 538 |
| Alw21I | GWGCWC | 2 cut(s) | 122, 393 |
| AlwI | GGATC | 2 cut(s) | 466, 473 |
| ApeKI | GCWGC | 1 cut(s) | 296 |
| AsuNHI | GCTAGC | 1 cut(s) | 235 |
| BanII | GRGCYC | 1 cut(s) | 393 |
| Bbv12I | GWGCWC | 2 cut(s) | 122, 393 |
| BbvI | GCAGC | 1 cut(s) | 308 |
| BccI | CCATC | 1 cut(s) | 442 |
| BclI | TGATCA | 1 cut(s) | 363 |
| BfaI | CTAG | 4 cut(s) | 32, 236, 300, 455 |
| BfmI | CTRYAG | 4 cut(s) | 19, 99, 486, 576 |
| BfuAI | ACCTGC | 1 cut(s) | 406 |
| BglII | AGATCT | 1 cut(s) | 158 |
| BisI | GCNGC | 1 cut(s) | 297 |
| BlsI | GCNGC | 1 cut(s) | 298 |
| BmiI | GGNNCC | 2 cut(s) | 13, 228 |
| BmsI | GCATC | 1 cut(s) | 248 |
| BmtI | GCTAGC | 1 cut(s) | 239 |
| Bpu10I | CCTNAGC | 1 cut(s) | 231 |
| BpuEI | CTTGAG | 1 cut(s) | 524 |
| BsaJI | CCNNGG | 1 cut(s) | 309 |
| Bse1I | ACTGG | 1 cut(s) | 13 |
| BseDI | CCNNGG | 1 cut(s) | 309 |
| BseGI | GGATG | 2 cut(s) | 415, 450 |
| BseMII | CTCAG | 3 cut(s) | 78, 222, 397 |
| BseNI | ACTGG | 1 cut(s) | 13 |
| BseXI | GCAGC | 1 cut(s) | 308 |
| BsiHKAI | GWGCWC | 2 cut(s) | 122, 393 |
| BsmI | GAATGC | 1 cut(s) | 63 |
| Bsp1286I | GDGCHC | 2 cut(s) | 122, 393 |
| Bsp143I | GATC | 5 cut(s) | 136, 158, 363, 458, 465 |
| BspCNI | CTCAG | 3 cut(s) | 79, 223, 396 |
| BspHI | TCATGA | 1 cut(s) | 319 |
| BspLI | GGNNCC | 2 cut(s) | 13, 228 |
| BspMAI | CTGCAG | 1 cut(s) | 103 |
| BspMI | ACCTGC | 1 cut(s) | 406 |
| BspOI | GCTAGC | 1 cut(s) | 239 |
| BspPI | GGATC | 2 cut(s) | 466, 473 |
| BsrI | ACTGG | 1 cut(s) | 13 |
| BssECI | CCNNGG | 1 cut(s) | 309 |
| BssMI | GATC | 5 cut(s) | 136, 158, 363, 458, 465 |
| BssNAI | GTATAC | 1 cut(s) | 221 |
| BssT1I | CCWWGG | 1 cut(s) | 309 |
| Bst1107I | GTATAC | 1 cut(s) | 221 |
| Bst4CI | ACNGT | 2 cut(s) | 208, 580 |
| BstC8I | GCNNGC | 2 cut(s) | 99, 237 |
| BstDEI | CTNAG | 6 cut(s) | 87, 174, 231, 267, 383, 561 |
| BstF5I | GGATG | 2 cut(s) | 415, 450 |
| BstKTI | GATC | 5 cut(s) | 139, 161, 366, 461, 468 |
| BstMBI | GATC | 5 cut(s) | 136, 158, 363, 458, 465 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 296, 581 |
| BstSFI | CTRYAG | 4 cut(s) | 19, 99, 486, 576 |
| BstV1I | GCAGC | 1 cut(s) | 308 |
| BstX2I | RGATCY | 1 cut(s) | 158 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 441 |
| BstYI | RGATCY | 1 cut(s) | 158 |
| BstZ17I | GTATAC | 1 cut(s) | 221 |
| BtsCI | GGATG | 2 cut(s) | 415, 450 |
| BveI | ACCTGC | 1 cut(s) | 406 |
| Cac8I | GCNNGC | 2 cut(s) | 99, 237 |
| CciI | TCATGA | 1 cut(s) | 319 |
| Csp6I | GTAC | 2 cut(s) | 189, 331 |
| CviAII | CATG | 4 cut(s) | 62, 196, 320, 334 |
| CviQI | GTAC | 2 cut(s) | 189, 331 |
| DdeI | CTNAG | 6 cut(s) | 87, 174, 231, 267, 383, 561 |
| DpnI | GATC | 5 cut(s) | 138, 160, 365, 460, 467 |
| DpnII | GATC | 5 cut(s) | 136, 158, 363, 458, 465 |
| DraI | TTTAAA | 1 cut(s) | 274 |
| Ecl136II | GAGCTC | 1 cut(s) | 391 |
| Eco130I | CCWWGG | 1 cut(s) | 309 |
| Eco24I | GRGCYC | 1 cut(s) | 393 |
| Eco53kI | GAGCTC | 1 cut(s) | 391 |
| EcoICRI | GAGCTC | 1 cut(s) | 391 |
| EcoT14I | CCWWGG | 1 cut(s) | 309 |
| EcoT22I | ATGCAT | 1 cut(s) | 63 |
| EcoT38I | GRGCYC | 1 cut(s) | 393 |
| ErhI | CCWWGG | 1 cut(s) | 309 |
| FaeI | CATG | 4 cut(s) | 65, 199, 323, 337 |
| FatI | CATG | 4 cut(s) | 61, 195, 319, 333 |
| FbaI | TGATCA | 1 cut(s) | 363 |
| FblI | GTMKAC | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 1 cut(s) | 297 |
| FokI | GGATG | 2 cut(s) | 422, 457 |
| FriOI | GRGCYC | 1 cut(s) | 393 |
| Fsp4HI | GCNGC | 1 cut(s) | 297 |
| FspBI | CTAG | 4 cut(s) | 32, 236, 300, 455 |
| GluI | GCNGC | 1 cut(s) | 297 |
| Hin1II | CATG | 4 cut(s) | 65, 199, 323, 337 |
| HinfI | GANTC | 2 cut(s) | 35, 381 |
| Hpy166II | GTNNAC | 1 cut(s) | 221 |
| Hpy188I | TCNGA | 2 cut(s) | 163, 244 |
| Hpy188III | TCNNGA | 3 cut(s) | 320, 342, 394 |
| Hpy8I | GTNNAC | 1 cut(s) | 221 |
| HpyCH4III | ACNGT | 2 cut(s) | 208, 580 |
| HpyCH4V | TGCA | 2 cut(s) | 61, 101 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 296, 581 |
| HpyF3I | CTNAG | 6 cut(s) | 87, 174, 231, 267, 383, 561 |
| Hsp92II | CATG | 4 cut(s) | 65, 199, 323, 337 |
| Ksp22I | TGATCA | 1 cut(s) | 363 |
| Kzo9I | GATC | 5 cut(s) | 136, 158, 363, 458, 465 |
| LmnI | GCTCC | 2 cut(s) | 226, 388 |
| LpnPI | CCDG | 8 cut(s) | 111, 196, 209, 243, 327, 370, 401, 542 |
| Lsp1109I | GCAGC | 1 cut(s) | 308 |
| LweI | GCATC | 1 cut(s) | 248 |
| MaeI | CTAG | 4 cut(s) | 32, 236, 300, 455 |
| MalI | GATC | 5 cut(s) | 138, 160, 365, 460, 467 |
| MboI | GATC | 5 cut(s) | 136, 158, 363, 458, 465 |
| MboII | GAAGA | 2 cut(s) | 370, 482 |
| MflI | RGATCY | 1 cut(s) | 158 |
| MhlI | GDGCHC | 2 cut(s) | 122, 393 |
| MlyI | GAGTC | 1 cut(s) | 375 |
| MnlI | CCTC | 4 cut(s) | 191, 202, 441, 509 |
| Mph1103I | ATGCAT | 1 cut(s) | 63 |
| MseI | TTAA | 1 cut(s) | 273 |
| MslI | CAYNNNNRTG | 1 cut(s) | 439 |
| Mva1269I | GAATGC | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 296, 581 |
| NdeII | GATC | 5 cut(s) | 136, 158, 363, 458, 465 |
| NheI | GCTAGC | 1 cut(s) | 235 |
| NlaIII | CATG | 4 cut(s) | 65, 199, 323, 337 |
| NlaIV | GGNNCC | 2 cut(s) | 13, 228 |
| NsiI | ATGCAT | 1 cut(s) | 63 |
| PagI | TCATGA | 1 cut(s) | 319 |
| PctI | GAATGC | 1 cut(s) | 63 |
| PfeI | GAWTC | 1 cut(s) | 35 |
| PkrI | GCNGC | 1 cut(s) | 298 |
| PleI | GAGTC | 1 cut(s) | 375 |
| PpsI | GAGTC | 1 cut(s) | 375 |
| Psp124BI | GAGCTC | 1 cut(s) | 393 |
| PspN4I | GGNNCC | 2 cut(s) | 13, 228 |
| PstI | CTGCAG | 1 cut(s) | 103 |
| PsuI | RGATCY | 1 cut(s) | 158 |
| RsaI | GTAC | 2 cut(s) | 190, 332 |
| RsaNI | GTAC | 2 cut(s) | 189, 331 |
| RseI | CAYNNNNRTG | 1 cut(s) | 439 |
| SacI | GAGCTC | 1 cut(s) | 393 |
| SaqAI | TTAA | 1 cut(s) | 273 |
| SatI | GCNGC | 1 cut(s) | 297 |
| Sau3AI | GATC | 5 cut(s) | 136, 158, 363, 458, 465 |
| SchI | GAGTC | 1 cut(s) | 375 |
| SduI | GDGCHC | 2 cut(s) | 122, 393 |
| SfaNI | GCATC | 1 cut(s) | 248 |
| SfcI | CTRYAG | 4 cut(s) | 19, 99, 486, 576 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 439 |
| SmlI | CTYRAG | 1 cut(s) | 539 |
| SmoI | CTYRAG | 1 cut(s) | 539 |
| SspMI | CTAG | 4 cut(s) | 32, 236, 300, 455 |
| SstI | GAGCTC | 1 cut(s) | 393 |
| StyI | CCWWGG | 1 cut(s) | 309 |
| TaaI | ACNGT | 2 cut(s) | 208, 580 |
| TaqI | TCGA | 1 cut(s) | 468 |
| TatI | WGTACW | 1 cut(s) | 330 |
| TfiI | GAWTC | 1 cut(s) | 35 |
| Tru1I | TTAA | 1 cut(s) | 273 |
| Tru9I | TTAA | 1 cut(s) | 273 |
| TseI | GCWGC | 1 cut(s) | 296 |
| TspDTI | ATGAA | 5 cut(s) | 78, 126, 308, 371, 437 |
| XmiI | GTMKAC | 1 cut(s) | 220 |
| XspI | CTAG | 4 cut(s) | 32, 236, 300, 455 |
| Zsp2I | ATGCAT | 1 cut(s) | 63 |