gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 156 |
| AcvI | CACGTG | 1 cut(s) | 471 |
| AflIII | ACRYGT | 1 cut(s) | 470 |
| AgsI | TTSAA | 3 cut(s) | 211, 358, 484 |
| AluBI | AGCT | 1 cut(s) | 227 |
| AluI | AGCT | 1 cut(s) | 227 |
| Alw21I | GWGCWC | 1 cut(s) | 320 |
| Alw26I | GTCTC | 2 cut(s) | 134, 224 |
| ApeKI | GCWGC | 1 cut(s) | 237 |
| ApoI | RAATTY | 1 cut(s) | 156 |
| AsuHPI | GGTGA | 2 cut(s) | 238, 324 |
| BaeGI | GKGCMC | 1 cut(s) | 422 |
| BbrPI | CACGTG | 1 cut(s) | 471 |
| Bbv12I | GWGCWC | 1 cut(s) | 320 |
| BbvI | GCAGC | 1 cut(s) | 249 |
| BccI | CCATC | 2 cut(s) | 100, 417 |
| BcoDI | GTCTC | 2 cut(s) | 134, 224 |
| BisI | GCNGC | 1 cut(s) | 238 |
| BlsI | GCNGC | 1 cut(s) | 239 |
| BpmI | CTGGAG | 2 cut(s) | 21, 45 |
| Bpu10I | CCTNAGC | 1 cut(s) | 281 |
| BsaAI | YACGTR | 1 cut(s) | 471 |
| BsaBI | GATNNNNATC | 1 cut(s) | 27 |
| Bse1I | ACTGG | 2 cut(s) | 117, 238 |
| Bse8I | GATNNNNATC | 1 cut(s) | 27 |
| BseGI | GGATG | 1 cut(s) | 426 |
| BseJI | GATNNNNATC | 1 cut(s) | 27 |
| BseMII | CTCAG | 1 cut(s) | 219 |
| BseNI | ACTGG | 2 cut(s) | 117, 238 |
| BseSI | GKGCMC | 1 cut(s) | 422 |
| BseXI | GCAGC | 1 cut(s) | 249 |
| BsiHKAI | GWGCWC | 1 cut(s) | 320 |
| BsmAI | GTCTC | 2 cut(s) | 134, 224 |
| Bsp1286I | GDGCHC | 2 cut(s) | 320, 422 |
| Bsp143I | GATC | 1 cut(s) | 28 |
| BspCNI | CTCAG | 1 cut(s) | 220 |
| BsrI | ACTGG | 2 cut(s) | 117, 238 |
| BssMI | GATC | 1 cut(s) | 28 |
| Bst4CI | ACNGT | 1 cut(s) | 145 |
| Bst6I | CTCTTC | 1 cut(s) | 60 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 474 |
| BstBAI | YACGTR | 1 cut(s) | 471 |
| BstC8I | GCNNGC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 2 cut(s) | 228, 281 |
| BstF5I | GGATG | 1 cut(s) | 426 |
| BstKTI | GATC | 1 cut(s) | 31 |
| BstMAI | GTCTC | 2 cut(s) | 134, 224 |
| BstMBI | GATC | 1 cut(s) | 28 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 474 |
| BstNSI | RCATGY | 1 cut(s) | 83 |
| BstSLI | GKGCMC | 1 cut(s) | 422 |
| BstV1I | GCAGC | 1 cut(s) | 249 |
| BtsCI | GGATG | 1 cut(s) | 426 |
| BtsIMutI | CAGTG | 1 cut(s) | 110 |
| Cac8I | GCNNGC | 1 cut(s) | 81 |
| CviAII | CATG | 1 cut(s) | 80 |
| CviJI | RGCY | 4 cut(s) | 176, 227, 240, 285 |
| CviKI_1 | RGCY | 4 cut(s) | 176, 227, 240, 285 |
| DdeI | CTNAG | 2 cut(s) | 228, 281 |
| DpnI | GATC | 1 cut(s) | 30 |
| DpnII | GATC | 1 cut(s) | 28 |
| Eam1104I | CTCTTC | 1 cut(s) | 60 |
| EarI | CTCTTC | 1 cut(s) | 60 |
| Eco72I | CACGTG | 1 cut(s) | 471 |
| EcoRI | GAATTC | 1 cut(s) | 156 |
| FaeI | CATG | 1 cut(s) | 83 |
| FaiI | YATR | 5 cut(s) | 81, 197, 296, 399, 505 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 171, 203 |
| FatI | CATG | 1 cut(s) | 79 |
| Fnu4HI | GCNGC | 1 cut(s) | 238 |
| FokI | GGATG | 1 cut(s) | 413 |
| Fsp4HI | GCNGC | 1 cut(s) | 238 |
| GluI | GCNGC | 1 cut(s) | 238 |
| GsuI | CTGGAG | 2 cut(s) | 21, 45 |
| Hin1II | CATG | 1 cut(s) | 83 |
| HinfI | GANTC | 1 cut(s) | 215 |
| HphI | GGTGA | 2 cut(s) | 238, 324 |
| Hpy188I | TCNGA | 2 cut(s) | 149, 162 |
| Hpy188III | TCNNGA | 1 cut(s) | 62 |
| HpyCH4III | ACNGT | 1 cut(s) | 145 |
| HpyCH4IV | ACGT | 1 cut(s) | 470 |
| HpyCH4V | TGCA | 1 cut(s) | 468 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 474 |
| HpyF3I | CTNAG | 2 cut(s) | 228, 281 |
| HpySE526I | ACGT | 1 cut(s) | 470 |
| Hsp92II | CATG | 1 cut(s) | 83 |
| Kzo9I | GATC | 1 cut(s) | 28 |
| LpnPI | CCDG | 6 cut(s) | 51, 75, 98, 204, 219, 326 |
| Lsp1109I | GCAGC | 1 cut(s) | 249 |
| MaeII | ACGT | 1 cut(s) | 470 |
| MaeIII | GTNAC | 2 cut(s) | 167, 298 |
| MalI | GATC | 1 cut(s) | 30 |
| MboI | GATC | 1 cut(s) | 28 |
| MboII | GAAGA | 5 cut(s) | 38, 77, 255, 297, 346 |
| MfeI | CAATTG | 1 cut(s) | 358 |
| MhlI | GDGCHC | 2 cut(s) | 320, 422 |
| MluCI | AATT | 4 cut(s) | 156, 182, 358, 400 |
| MmeI | TCCRAC | 1 cut(s) | 454 |
| MnlI | CCTC | 5 cut(s) | 45, 60, 143, 296, 401 |
| MseI | TTAA | 1 cut(s) | 45 |
| MunI | CAATTG | 1 cut(s) | 358 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 474 |
| NdeII | GATC | 1 cut(s) | 28 |
| NlaIII | CATG | 1 cut(s) | 83 |
| NmuCI | GTSAC | 2 cut(s) | 167, 298 |
| NspI | RCATGY | 1 cut(s) | 83 |
| PaeI | GCATGC | 1 cut(s) | 83 |
| PfeI | GAWTC | 1 cut(s) | 215 |
| PkrI | GCNGC | 1 cut(s) | 239 |
| PmaCI | CACGTG | 1 cut(s) | 471 |
| PmlI | CACGTG | 1 cut(s) | 471 |
| Ppu21I | YACGTR | 1 cut(s) | 471 |
| PspCI | CACGTG | 1 cut(s) | 471 |
| SaqAI | TTAA | 1 cut(s) | 45 |
| SatI | GCNGC | 1 cut(s) | 238 |
| Sau3AI | GATC | 1 cut(s) | 28 |
| SduI | GDGCHC | 2 cut(s) | 320, 422 |
| SetI | ASST | 4 cut(s) | 37, 154, 229, 473 |
| SphI | GCATGC | 1 cut(s) | 83 |
| Sse9I | AATT | 4 cut(s) | 156, 182, 358, 400 |
| TaaI | ACNGT | 1 cut(s) | 145 |
| TaiI | ACGT | 1 cut(s) | 473 |
| TaqI | TCGA | 1 cut(s) | 9 |
| TasI | AATT | 4 cut(s) | 156, 182, 358, 400 |
| TfiI | GAWTC | 1 cut(s) | 215 |
| Tru1I | TTAA | 1 cut(s) | 45 |
| Tru9I | TTAA | 1 cut(s) | 45 |
| TscAI | CASTG | 1 cut(s) | 117 |
| TseFI | GTSAC | 2 cut(s) | 167, 298 |
| TseI | GCWGC | 1 cut(s) | 237 |
| Tsp45I | GTSAC | 2 cut(s) | 167, 298 |
| TspDTI | ATGAA | 3 cut(s) | 39, 386, 492 |
| TspGWI | ACGGA | 1 cut(s) | 487 |
| TspRI | CASTG | 1 cut(s) | 117 |
| XapI | RAATTY | 1 cut(s) | 156 |
| XceI | RCATGY | 1 cut(s) | 83 |