gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 220, 332, 361 |
| AflII | CTTAAG | 1 cut(s) | 194 |
| AgsI | TTSAA | 2 cut(s) | 83, 151 |
| AhlI | ACTAGT | 1 cut(s) | 296 |
| AluBI | AGCT | 3 cut(s) | 99, 119, 281 |
| AluI | AGCT | 3 cut(s) | 99, 119, 281 |
| Alw26I | GTCTC | 1 cut(s) | 195 |
| AoxI | GGCC | 2 cut(s) | 322, 460 |
| ApaI | GGGCCC | 1 cut(s) | 464 |
| ApeKI | GCWGC | 1 cut(s) | 281 |
| ApoI | RAATTY | 3 cut(s) | 220, 332, 361 |
| AspS9I | GGNCC | 4 cut(s) | 303, 323, 460, 461 |
| AsuNHI | GCTAGC | 1 cut(s) | 95 |
| AvaII | GGWCC | 1 cut(s) | 303 |
| BaeGI | GKGCMC | 1 cut(s) | 464 |
| BanII | GRGCYC | 1 cut(s) | 464 |
| BauI | CACGAG | 1 cut(s) | 431 |
| BbvI | GCAGC | 1 cut(s) | 268 |
| BcoDI | GTCTC | 1 cut(s) | 195 |
| BcuI | ACTAGT | 1 cut(s) | 296 |
| BfaI | CTAG | 3 cut(s) | 24, 96, 297 |
| BfrI | CTTAAG | 1 cut(s) | 194 |
| BisI | GCNGC | 1 cut(s) | 282 |
| BlsI | GCNGC | 1 cut(s) | 283 |
| Bme18I | GGWCC | 1 cut(s) | 303 |
| BmgT120I | GGNCC | 4 cut(s) | 303, 323, 460, 461 |
| BmiI | GGNNCC | 4 cut(s) | 304, 325, 462, 463 |
| BmsI | GCATC | 1 cut(s) | 46 |
| BmtI | GCTAGC | 1 cut(s) | 99 |
| Bse1I | ACTGG | 2 cut(s) | 245, 431 |
| BseGI | GGATG | 1 cut(s) | 9 |
| BseNI | ACTGG | 2 cut(s) | 245, 431 |
| BseRI | GAGGAG | 1 cut(s) | 197 |
| BseSI | GKGCMC | 1 cut(s) | 464 |
| BseXI | GCAGC | 1 cut(s) | 268 |
| BshFI | GGCC | 2 cut(s) | 324, 462 |
| BslFI | GGGAC | 4 cut(s) | 47, 158, 316, 456 |
| BsmAI | GTCTC | 1 cut(s) | 195 |
| BsmFI | GGGAC | 4 cut(s) | 47, 158, 316, 456 |
| BsnI | GGCC | 2 cut(s) | 324, 462 |
| Bsp120I | GGGCCC | 1 cut(s) | 460 |
| Bsp1286I | GDGCHC | 1 cut(s) | 464 |
| BspANI | GGCC | 2 cut(s) | 324, 462 |
| BspLI | GGNNCC | 4 cut(s) | 304, 325, 462, 463 |
| BspOI | GCTAGC | 1 cut(s) | 99 |
| BspTI | CTTAAG | 1 cut(s) | 194 |
| BsrI | ACTGG | 2 cut(s) | 245, 431 |
| BssSI | CACGAG | 1 cut(s) | 431 |
| Bst2BI | CACGAG | 1 cut(s) | 431 |
| Bst4CI | ACNGT | 1 cut(s) | 277 |
| Bst6I | CTCTTC | 1 cut(s) | 174 |
| BstAFI | CTTAAG | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 1 cut(s) | 97 |
| BstF5I | GGATG | 1 cut(s) | 9 |
| BstMAI | GTCTC | 1 cut(s) | 195 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 125, 378 |
| BstSLI | GKGCMC | 1 cut(s) | 464 |
| BstV1I | GCAGC | 1 cut(s) | 268 |
| BsuRI | GGCC | 2 cut(s) | 324, 462 |
| BtsCI | GGATG | 1 cut(s) | 9 |
| BtsI | GCAGTG | 1 cut(s) | 146 |
| BtsIMutI | CAGTG | 1 cut(s) | 146 |
| Cac8I | GCNNGC | 1 cut(s) | 97 |
| Cfr13I | GGNCC | 4 cut(s) | 303, 323, 460, 461 |
| CviJI | RGCY | 7 cut(s) | 99, 119, 260, 281, 324, 430, 462 |
| CviKI_1 | RGCY | 7 cut(s) | 99, 119, 260, 281, 324, 430, 462 |
| Eam1104I | CTCTTC | 1 cut(s) | 174 |
| EarI | CTCTTC | 1 cut(s) | 174 |
| Eco24I | GRGCYC | 1 cut(s) | 464 |
| Eco47I | GGWCC | 1 cut(s) | 303 |
| EcoO109I | RGGNCCY | 2 cut(s) | 460, 461 |
| EcoT38I | GRGCYC | 1 cut(s) | 464 |
| FaiI | YATR | 2 cut(s) | 72, 396 |
| FaqI | GGGAC | 4 cut(s) | 47, 158, 316, 456 |
| Fnu4HI | GCNGC | 1 cut(s) | 282 |
| FriOI | GRGCYC | 1 cut(s) | 464 |
| Fsp4HI | GCNGC | 1 cut(s) | 282 |
| FspBI | CTAG | 3 cut(s) | 24, 96, 297 |
| GluI | GCNGC | 1 cut(s) | 282 |
| HaeIII | GGCC | 2 cut(s) | 324, 462 |
| Hpy188III | TCNNGA | 6 cut(s) | 13, 32, 53, 357, 400, 433 |
| HpyAV | CCTTC | 2 cut(s) | 238, 383 |
| HpyCH4III | ACNGT | 1 cut(s) | 277 |
| HpyCH4V | TGCA | 4 cut(s) | 164, 175, 284, 381 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 125, 378 |
| LmnI | GCTCC | 1 cut(s) | 136 |
| LpnPI | CCDG | 5 cut(s) | 26, 105, 226, 342, 412 |
| Lsp1109I | GCAGC | 1 cut(s) | 268 |
| LweI | GCATC | 1 cut(s) | 46 |
| MaeI | CTAG | 3 cut(s) | 24, 96, 297 |
| MboII | GAAGA | 2 cut(s) | 191, 415 |
| MhlI | GDGCHC | 1 cut(s) | 464 |
| MluCI | AATT | 5 cut(s) | 159, 220, 332, 361, 406 |
| MnlI | CCTC | 4 cut(s) | 175, 178, 283, 451 |
| MseI | TTAA | 5 cut(s) | 38, 158, 195, 366, 420 |
| MspCI | CTTAAG | 1 cut(s) | 194 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 125, 378 |
| NheI | GCTAGC | 1 cut(s) | 95 |
| NlaIV | GGNNCC | 4 cut(s) | 304, 325, 462, 463 |
| PkrI | GCNGC | 1 cut(s) | 283 |
| PspN4I | GGNNCC | 4 cut(s) | 304, 325, 462, 463 |
| PspOMI | GGGCCC | 1 cut(s) | 460 |
| PspPI | GGNCC | 4 cut(s) | 303, 323, 460, 461 |
| SaqAI | TTAA | 5 cut(s) | 38, 158, 195, 366, 420 |
| SatI | GCNGC | 1 cut(s) | 282 |
| Sau96I | GGNCC | 4 cut(s) | 303, 323, 460, 461 |
| SduI | GDGCHC | 1 cut(s) | 464 |
| SetI | ASST | 3 cut(s) | 101, 121, 283 |
| SfaNI | GCATC | 1 cut(s) | 46 |
| SinI | GGWCC | 1 cut(s) | 303 |
| SmlI | CTYRAG | 1 cut(s) | 194 |
| SmoI | CTYRAG | 1 cut(s) | 194 |
| SpeI | ACTAGT | 1 cut(s) | 296 |
| Sse9I | AATT | 5 cut(s) | 159, 220, 332, 361, 406 |
| SspMI | CTAG | 3 cut(s) | 24, 96, 297 |
| TaaI | ACNGT | 1 cut(s) | 277 |
| TasI | AATT | 5 cut(s) | 159, 220, 332, 361, 406 |
| Tru1I | TTAA | 5 cut(s) | 38, 158, 195, 366, 420 |
| Tru9I | TTAA | 5 cut(s) | 38, 158, 195, 366, 420 |
| TscAI | CASTG | 1 cut(s) | 146 |
| TseI | GCWGC | 1 cut(s) | 281 |
| TspDTI | ATGAA | 2 cut(s) | 52, 59 |
| TspRI | CASTG | 1 cut(s) | 146 |
| Vha464I | CTTAAG | 1 cut(s) | 194 |
| VpaK11BI | GGWCC | 1 cut(s) | 303 |
| XapI | RAATTY | 3 cut(s) | 220, 332, 361 |
| XspI | CTAG | 3 cut(s) | 24, 96, 297 |