gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 276 |
| AclWI | GGATC | 2 cut(s) | 116, 443 |
| AcsI | RAATTY | 1 cut(s) | 49 |
| AfaI | GTAC | 1 cut(s) | 302 |
| AflIII | ACRYGT | 1 cut(s) | 168 |
| AgsI | TTSAA | 5 cut(s) | 32, 49, 55, 115, 288 |
| AluBI | AGCT | 3 cut(s) | 79, 128, 421 |
| AluI | AGCT | 3 cut(s) | 79, 128, 421 |
| Alw21I | GWGCWC | 1 cut(s) | 81 |
| Alw26I | GTCTC | 1 cut(s) | 63 |
| AlwI | GGATC | 2 cut(s) | 116, 443 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 131 |
| AoxI | GGCC | 1 cut(s) | 427 |
| ApoI | RAATTY | 1 cut(s) | 49 |
| AspA2I | CCTAGG | 1 cut(s) | 85 |
| AvrII | CCTAGG | 1 cut(s) | 85 |
| BanII | GRGCYC | 1 cut(s) | 81 |
| Bbv12I | GWGCWC | 1 cut(s) | 81 |
| BccI | CCATC | 1 cut(s) | 193 |
| BcoDI | GTCTC | 1 cut(s) | 63 |
| BfaI | CTAG | 1 cut(s) | 86 |
| BlnI | CCTAGG | 1 cut(s) | 85 |
| BmsI | GCATC | 2 cut(s) | 27, 223 |
| BpuEI | CTTGAG | 1 cut(s) | 34 |
| BsaJI | CCNNGG | 3 cut(s) | 40, 85, 153 |
| BsaWI | WCCGGW | 1 cut(s) | 350 |
| Bse3DI | GCAATG | 2 cut(s) | 332, 408 |
| BseDI | CCNNGG | 3 cut(s) | 40, 85, 153 |
| BseGI | GGATG | 1 cut(s) | 149 |
| BseMI | GCAATG | 2 cut(s) | 332, 408 |
| BseMII | CTCAG | 1 cut(s) | 312 |
| BshFI | GGCC | 1 cut(s) | 429 |
| BsiHKAI | GWGCWC | 1 cut(s) | 81 |
| BsiSI | CCGG | 1 cut(s) | 351 |
| BsmAI | GTCTC | 1 cut(s) | 63 |
| BsmI | GAATGC | 1 cut(s) | 346 |
| BsnI | GGCC | 1 cut(s) | 429 |
| Bsp1286I | GDGCHC | 1 cut(s) | 81 |
| Bsp143I | GATC | 3 cut(s) | 121, 207, 448 |
| Bsp19I | CCATGG | 1 cut(s) | 40 |
| BspANI | GGCC | 1 cut(s) | 429 |
| BspCNI | CTCAG | 1 cut(s) | 313 |
| BspPI | GGATC | 2 cut(s) | 116, 443 |
| BspQI | GCTCTTC | 1 cut(s) | 215 |
| BsrDI | GCAATG | 2 cut(s) | 332, 408 |
| BssECI | CCNNGG | 3 cut(s) | 40, 85, 153 |
| BssMI | GATC | 3 cut(s) | 121, 207, 448 |
| BssT1I | CCWWGG | 3 cut(s) | 40, 85, 153 |
| Bst6I | CTCTTC | 1 cut(s) | 215 |
| BstDEI | CTNAG | 1 cut(s) | 321 |
| BstDSI | CCRYGG | 1 cut(s) | 40 |
| BstF5I | GGATG | 1 cut(s) | 149 |
| BstKTI | GATC | 3 cut(s) | 124, 210, 451 |
| BstMAI | GTCTC | 1 cut(s) | 63 |
| BstMBI | GATC | 3 cut(s) | 121, 207, 448 |
| BstNSI | RCATGY | 1 cut(s) | 172 |
| BstX2I | RGATCY | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 121 |
| BsuRI | GGCC | 1 cut(s) | 429 |
| BtgI | CCRYGG | 1 cut(s) | 40 |
| BtsCI | GGATG | 1 cut(s) | 149 |
| BtsIMutI | CAGTG | 1 cut(s) | 203 |
| CaiI | CAGNNNCTG | 1 cut(s) | 131 |
| Csp6I | GTAC | 1 cut(s) | 301 |
| CviAII | CATG | 5 cut(s) | 41, 107, 169, 226, 371 |
| CviJI | RGCY | 6 cut(s) | 79, 128, 161, 320, 421, 429 |
| CviKI_1 | RGCY | 6 cut(s) | 79, 128, 161, 320, 421, 429 |
| CviQI | GTAC | 1 cut(s) | 301 |
| DdeI | CTNAG | 1 cut(s) | 321 |
| DpnI | GATC | 3 cut(s) | 123, 209, 450 |
| DpnII | GATC | 3 cut(s) | 121, 207, 448 |
| Eam1104I | CTCTTC | 1 cut(s) | 215 |
| EarI | CTCTTC | 1 cut(s) | 215 |
| Ecl136II | GAGCTC | 1 cut(s) | 79 |
| Eco130I | CCWWGG | 3 cut(s) | 40, 85, 153 |
| Eco147I | AGGCCT | 1 cut(s) | 429 |
| Eco24I | GRGCYC | 1 cut(s) | 81 |
| Eco53kI | GAGCTC | 1 cut(s) | 79 |
| EcoICRI | GAGCTC | 1 cut(s) | 79 |
| EcoT14I | CCWWGG | 3 cut(s) | 40, 85, 153 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 346 |
| EcoT38I | GRGCYC | 1 cut(s) | 81 |
| ErhI | CCWWGG | 3 cut(s) | 40, 85, 153 |
| FaeI | CATG | 5 cut(s) | 44, 110, 172, 229, 374 |
| FatI | CATG | 5 cut(s) | 40, 106, 168, 225, 370 |
| FauNDI | CATATG | 1 cut(s) | 465 |
| FblI | GTMKAC | 1 cut(s) | 276 |
| FokI | GGATG | 1 cut(s) | 136 |
| FriOI | GRGCYC | 1 cut(s) | 81 |
| FspBI | CTAG | 1 cut(s) | 86 |
| HaeIII | GGCC | 1 cut(s) | 429 |
| HapII | CCGG | 1 cut(s) | 351 |
| Hin1II | CATG | 5 cut(s) | 44, 110, 172, 229, 374 |
| HpaII | CCGG | 1 cut(s) | 351 |
| Hpy166II | GTNNAC | 1 cut(s) | 277 |
| Hpy188I | TCNGA | 1 cut(s) | 313 |
| Hpy188III | TCNNGA | 1 cut(s) | 55 |
| Hpy8I | GTNNAC | 1 cut(s) | 277 |
| HpyAV | CCTTC | 3 cut(s) | 58, 109, 391 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 143, 213, 236, 344, 390, 413, 463 |
| HpyF3I | CTNAG | 1 cut(s) | 321 |
| Hsp92II | CATG | 5 cut(s) | 44, 110, 172, 229, 374 |
| Kzo9I | GATC | 3 cut(s) | 121, 207, 448 |
| LguI | GCTCTTC | 1 cut(s) | 215 |
| LmnI | GCTCC | 1 cut(s) | 42 |
| LpnPI | CCDG | 5 cut(s) | 138, 267, 364, 399, 443 |
| LweI | GCATC | 2 cut(s) | 27, 223 |
| MaeI | CTAG | 1 cut(s) | 86 |
| MalI | GATC | 3 cut(s) | 123, 209, 450 |
| MboI | GATC | 3 cut(s) | 121, 207, 448 |
| MboII | GAAGA | 2 cut(s) | 131, 232 |
| MfeI | CAATTG | 1 cut(s) | 288 |
| MflI | RGATCY | 1 cut(s) | 121 |
| MhlI | GDGCHC | 1 cut(s) | 81 |
| MluCI | AATT | 7 cut(s) | 27, 32, 49, 134, 283, 288, 469 |
| MnlI | CCTC | 1 cut(s) | 239 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 346 |
| MseI | TTAA | 3 cut(s) | 102, 240, 282 |
| MspI | CCGG | 1 cut(s) | 351 |
| MunI | CAATTG | 1 cut(s) | 288 |
| Mva1269I | GAATGC | 1 cut(s) | 346 |
| NcoI | CCATGG | 1 cut(s) | 40 |
| NdeI | CATATG | 1 cut(s) | 465 |
| NdeII | GATC | 3 cut(s) | 121, 207, 448 |
| NlaIII | CATG | 5 cut(s) | 44, 110, 172, 229, 374 |
| NsiI | ATGCAT | 2 cut(s) | 6, 346 |
| NspI | RCATGY | 1 cut(s) | 172 |
| PceI | AGGCCT | 1 cut(s) | 429 |
| PciI | ACATGT | 1 cut(s) | 168 |
| PciSI | GCTCTTC | 1 cut(s) | 215 |
| PctI | GAATGC | 1 cut(s) | 346 |
| PscI | ACATGT | 1 cut(s) | 168 |
| Psp124BI | GAGCTC | 1 cut(s) | 81 |
| PstNI | CAGNNNCTG | 1 cut(s) | 131 |
| PsuI | RGATCY | 1 cut(s) | 121 |
| RsaI | GTAC | 1 cut(s) | 302 |
| RsaNI | GTAC | 1 cut(s) | 301 |
| SacI | GAGCTC | 1 cut(s) | 81 |
| SapI | GCTCTTC | 1 cut(s) | 215 |
| SaqAI | TTAA | 3 cut(s) | 102, 240, 282 |
| Sau3AI | GATC | 3 cut(s) | 121, 207, 448 |
| SduI | GDGCHC | 1 cut(s) | 81 |
| SetI | ASST | 6 cut(s) | 81, 87, 91, 130, 309, 423 |
| SfaNI | GCATC | 2 cut(s) | 27, 223 |
| SmlI | CTYRAG | 1 cut(s) | 13 |
| SmoI | CTYRAG | 1 cut(s) | 13 |
| Sse9I | AATT | 7 cut(s) | 27, 32, 49, 134, 283, 288, 469 |
| SseBI | AGGCCT | 1 cut(s) | 429 |
| SspMI | CTAG | 1 cut(s) | 86 |
| SstI | GAGCTC | 1 cut(s) | 81 |
| StuI | AGGCCT | 1 cut(s) | 429 |
| StyI | CCWWGG | 3 cut(s) | 40, 85, 153 |
| TasI | AATT | 7 cut(s) | 27, 32, 49, 134, 283, 288, 469 |
| TatI | WGTACW | 1 cut(s) | 300 |
| Tru1I | TTAA | 3 cut(s) | 102, 240, 282 |
| Tru9I | TTAA | 3 cut(s) | 102, 240, 282 |
| TscAI | CASTG | 1 cut(s) | 210 |
| TspDTI | ATGAA | 2 cut(s) | 410, 452 |
| TspRI | CASTG | 1 cut(s) | 210 |
| XapI | RAATTY | 1 cut(s) | 49 |
| XceI | RCATGY | 1 cut(s) | 172 |
| XmaJI | CCTAGG | 1 cut(s) | 85 |
| XmiI | GTMKAC | 1 cut(s) | 276 |
| XspI | CTAG | 1 cut(s) | 86 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 346 |