gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 50, 71, 78, 144, 186 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 77 |
| AleI | CACNNNNGTG | 1 cut(s) | 26 |
| AluBI | AGCT | 1 cut(s) | 166 |
| AluI | AGCT | 1 cut(s) | 166 |
| Ama87I | CYCGRG | 1 cut(s) | 33 |
| AspS9I | GGNCC | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 3 cut(s) | 13, 50, 172 |
| AvaI | CYCGRG | 1 cut(s) | 33 |
| AvaII | GGWCC | 1 cut(s) | 80 |
| BbsI | GAAGAC | 1 cut(s) | 38 |
| BclI | TGATCA | 1 cut(s) | 94 |
| BglII | AGATCT | 1 cut(s) | 121 |
| BlpI | GCTNAGC | 1 cut(s) | 74 |
| Bme18I | GGWCC | 1 cut(s) | 80 |
| BmeT110I | CYCGRG | 1 cut(s) | 33 |
| BmgT120I | GGNCC | 1 cut(s) | 80 |
| BmsI | GCATC | 1 cut(s) | 163 |
| BpiI | GAAGAC | 1 cut(s) | 38 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 74 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 77 |
| BseGI | GGATG | 1 cut(s) | 178 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 77 |
| BsiHKCI | CYCGRG | 1 cut(s) | 33 |
| BslFI | GGGAC | 1 cut(s) | 16 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 77 |
| BsmFI | GGGAC | 1 cut(s) | 16 |
| BsoBI | CYCGRG | 1 cut(s) | 33 |
| Bsp143I | GATC | 2 cut(s) | 94, 121 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 74 |
| BspACI | CCGC | 5 cut(s) | 50, 71, 78, 144, 186 |
| BssMI | GATC | 2 cut(s) | 94, 121 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstC8I | GCNNGC | 1 cut(s) | 142 |
| BstDEI | CTNAG | 1 cut(s) | 74 |
| BstF5I | GGATG | 1 cut(s) | 178 |
| BstKTI | GATC | 2 cut(s) | 97, 124 |
| BstMBI | GATC | 2 cut(s) | 94, 121 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 194 |
| BstV2I | GAAGAC | 1 cut(s) | 38 |
| BstX2I | RGATCY | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 121 |
| BtsCI | GGATG | 1 cut(s) | 178 |
| Cac8I | GCNNGC | 1 cut(s) | 142 |
| Cfr13I | GGNCC | 1 cut(s) | 80 |
| CviAII | CATG | 1 cut(s) | 90 |
| CviJI | RGCY | 1 cut(s) | 166 |
| CviKI_1 | RGCY | 1 cut(s) | 166 |
| DdeI | CTNAG | 1 cut(s) | 74 |
| DpnI | GATC | 2 cut(s) | 96, 123 |
| DpnII | GATC | 2 cut(s) | 94, 121 |
| EciI | GGCGGA | 1 cut(s) | 159 |
| Eco47I | GGWCC | 1 cut(s) | 80 |
| Eco88I | CYCGRG | 1 cut(s) | 33 |
| FaeI | CATG | 1 cut(s) | 93 |
| FaiI | YATR | 4 cut(s) | 42, 91, 128, 191 |
| FaqI | GGGAC | 1 cut(s) | 16 |
| FatI | CATG | 1 cut(s) | 89 |
| FbaI | TGATCA | 1 cut(s) | 94 |
| FokI | GGATG | 1 cut(s) | 185 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 93 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| HinfI | GANTC | 1 cut(s) | 134 |
| HphI | GGTGA | 3 cut(s) | 13, 50, 172 |
| Hpy188III | TCNNGA | 1 cut(s) | 33 |
| HpyAV | CCTTC | 1 cut(s) | 107 |
| HpyCH4IV | ACGT | 1 cut(s) | 106 |
| HpyCH4V | TGCA | 2 cut(s) | 103, 176 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 194 |
| HpyF3I | CTNAG | 1 cut(s) | 74 |
| HpySE526I | ACGT | 1 cut(s) | 106 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 1 cut(s) | 93 |
| Ksp22I | TGATCA | 1 cut(s) | 94 |
| Kzo9I | GATC | 2 cut(s) | 94, 121 |
| LpnPI | CCDG | 1 cut(s) | 126 |
| LweI | GCATC | 1 cut(s) | 163 |
| MaeII | ACGT | 1 cut(s) | 106 |
| MalI | GATC | 2 cut(s) | 96, 123 |
| MboI | GATC | 2 cut(s) | 94, 121 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MfeI | CAATTG | 1 cut(s) | 98 |
| MflI | RGATCY | 1 cut(s) | 121 |
| MluCI | AATT | 1 cut(s) | 98 |
| MnlI | CCTC | 1 cut(s) | 93 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| MunI | CAATTG | 1 cut(s) | 98 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 194 |
| NdeII | GATC | 2 cut(s) | 94, 121 |
| NlaIII | CATG | 1 cut(s) | 93 |
| OliI | CACNNNNGTG | 1 cut(s) | 26 |
| PfeI | GAWTC | 1 cut(s) | 134 |
| PspPI | GGNCC | 1 cut(s) | 80 |
| PsuI | RGATCY | 1 cut(s) | 121 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| Sau3AI | GATC | 2 cut(s) | 94, 121 |
| Sau96I | GGNCC | 1 cut(s) | 80 |
| SetI | ASST | 4 cut(s) | 85, 109, 162, 168 |
| SfaNI | GCATC | 1 cut(s) | 163 |
| SgeI | CNNG | 7 cut(s) | 45, 47, 74, 102, 131, 143, 153 |
| SinI | GGWCC | 1 cut(s) | 80 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| Sse9I | AATT | 1 cut(s) | 98 |
| SsiI | CCGC | 5 cut(s) | 50, 71, 78, 144, 186 |
| TaiI | ACGT | 1 cut(s) | 109 |
| TaqI | TCGA | 1 cut(s) | 132 |
| TasI | AATT | 1 cut(s) | 98 |
| TfiI | GAWTC | 1 cut(s) | 134 |
| TspDTI | ATGAA | 1 cut(s) | 44 |
| VpaK11BI | GGWCC | 1 cut(s) | 80 |