gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 154 |
| Acc36I | ACCTGC | 2 cut(s) | 154, 237 |
| AclWI | GGATC | 2 cut(s) | 71, 261 |
| AcsI | RAATTY | 1 cut(s) | 242 |
| AfaI | GTAC | 1 cut(s) | 60 |
| AgsI | TTSAA | 3 cut(s) | 170, 242, 302 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 234, 266 |
| AluBI | AGCT | 2 cut(s) | 298, 321 |
| AluI | AGCT | 2 cut(s) | 298, 321 |
| AlwI | GGATC | 2 cut(s) | 71, 261 |
| AoxI | GGCC | 1 cut(s) | 188 |
| ApeKI | GCWGC | 1 cut(s) | 285 |
| ApoI | RAATTY | 1 cut(s) | 242 |
| AsuHPI | GGTGA | 2 cut(s) | 135, 266 |
| BbvI | GCAGC | 1 cut(s) | 297 |
| BclI | TGATCA | 1 cut(s) | 256 |
| BfaI | CTAG | 1 cut(s) | 183 |
| BfmI | CTRYAG | 1 cut(s) | 230 |
| BfuAI | ACCTGC | 2 cut(s) | 154, 237 |
| BisI | GCNGC | 1 cut(s) | 286 |
| BlsI | GCNGC | 1 cut(s) | 287 |
| BmsI | GCATC | 1 cut(s) | 140 |
| Bsa29I | ATCGAT | 1 cut(s) | 265 |
| BsaBI | GATNNNNATC | 1 cut(s) | 261 |
| Bse3DI | GCAATG | 1 cut(s) | 80 |
| Bse8I | GATNNNNATC | 1 cut(s) | 261 |
| BseCI | ATCGAT | 1 cut(s) | 265 |
| BseJI | GATNNNNATC | 1 cut(s) | 261 |
| BseMI | GCAATG | 1 cut(s) | 80 |
| BseXI | GCAGC | 1 cut(s) | 297 |
| BsgI | GTGCAG | 1 cut(s) | 108 |
| BshFI | GGCC | 1 cut(s) | 190 |
| BshVI | ATCGAT | 1 cut(s) | 265 |
| BsnI | GGCC | 1 cut(s) | 190 |
| Bsp143I | GATC | 4 cut(s) | 76, 256, 262, 266 |
| BspANI | GGCC | 1 cut(s) | 190 |
| BspDI | ATCGAT | 1 cut(s) | 265 |
| BspHI | TCATGA | 1 cut(s) | 259 |
| BspMAI | CTGCAG | 1 cut(s) | 234 |
| BspMI | ACCTGC | 2 cut(s) | 154, 237 |
| BspPI | GGATC | 2 cut(s) | 71, 261 |
| BsrDI | GCAATG | 1 cut(s) | 80 |
| BssMI | GATC | 4 cut(s) | 76, 256, 262, 266 |
| BstC8I | GCNNGC | 1 cut(s) | 319 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstKTI | GATC | 4 cut(s) | 79, 259, 265, 269 |
| BstMBI | GATC | 4 cut(s) | 76, 256, 262, 266 |
| BstNSI | RCATGY | 1 cut(s) | 131 |
| BstSFI | CTRYAG | 1 cut(s) | 230 |
| BstV1I | GCAGC | 1 cut(s) | 297 |
| BstX2I | RGATCY | 1 cut(s) | 76 |
| BstYI | RGATCY | 1 cut(s) | 76 |
| Bsu15I | ATCGAT | 1 cut(s) | 265 |
| BsuRI | GGCC | 1 cut(s) | 190 |
| BsuTUI | ATCGAT | 1 cut(s) | 265 |
| BveI | ACCTGC | 2 cut(s) | 154, 237 |
| Cac8I | GCNNGC | 1 cut(s) | 319 |
| CciI | TCATGA | 1 cut(s) | 259 |
| ClaI | ATCGAT | 1 cut(s) | 265 |
| Csp6I | GTAC | 1 cut(s) | 59 |
| CviAII | CATG | 5 cut(s) | 18, 89, 98, 128, 260 |
| CviJI | RGCY | 3 cut(s) | 190, 298, 321 |
| CviKI_1 | RGCY | 3 cut(s) | 190, 298, 321 |
| CviQI | GTAC | 1 cut(s) | 59 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| DpnI | GATC | 4 cut(s) | 78, 258, 264, 268 |
| DpnII | GATC | 4 cut(s) | 76, 256, 262, 266 |
| Eco147I | AGGCCT | 1 cut(s) | 190 |
| EcoT22I | ATGCAT | 1 cut(s) | 133 |
| FaeI | CATG | 5 cut(s) | 21, 92, 101, 131, 263 |
| FaiI | YATR | 9 cut(s) | 19, 33, 35, 90, 99, 129, 261, 278, 327 |
| FatI | CATG | 5 cut(s) | 17, 88, 97, 127, 259 |
| FauNDI | CATATG | 1 cut(s) | 33 |
| FbaI | TGATCA | 1 cut(s) | 256 |
| Fnu4HI | GCNGC | 1 cut(s) | 286 |
| Fsp4HI | GCNGC | 1 cut(s) | 286 |
| FspBI | CTAG | 1 cut(s) | 183 |
| GluI | GCNGC | 1 cut(s) | 286 |
| HaeIII | GGCC | 1 cut(s) | 190 |
| Hin1II | CATG | 5 cut(s) | 21, 92, 101, 131, 263 |
| HphI | GGTGA | 2 cut(s) | 135, 266 |
| Hpy166II | GTNNAC | 1 cut(s) | 11 |
| Hpy188III | TCNNGA | 2 cut(s) | 152, 260 |
| Hpy8I | GTNNAC | 1 cut(s) | 11 |
| HpyAV | CCTTC | 1 cut(s) | 48 |
| HpyCH4V | TGCA | 5 cut(s) | 29, 85, 125, 131, 232 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| Hsp92II | CATG | 5 cut(s) | 21, 92, 101, 131, 263 |
| Ksp22I | TGATCA | 1 cut(s) | 256 |
| Kzo9I | GATC | 4 cut(s) | 76, 256, 262, 266 |
| LpnPI | CCDG | 3 cut(s) | 159, 218, 242 |
| Lsp1109I | GCAGC | 1 cut(s) | 297 |
| LweI | GCATC | 1 cut(s) | 140 |
| MaeI | CTAG | 1 cut(s) | 183 |
| MaeIII | GTNAC | 1 cut(s) | 224 |
| MalI | GATC | 4 cut(s) | 78, 258, 264, 268 |
| MboI | GATC | 4 cut(s) | 76, 256, 262, 266 |
| MboII | GAAGA | 1 cut(s) | 298 |
| MflI | RGATCY | 1 cut(s) | 76 |
| MluCI | AATT | 2 cut(s) | 52, 242 |
| MnlI | CCTC | 1 cut(s) | 323 |
| Mph1103I | ATGCAT | 1 cut(s) | 133 |
| MslI | CAYNNNNRTG | 1 cut(s) | 16 |
| NdeI | CATATG | 1 cut(s) | 33 |
| NdeII | GATC | 4 cut(s) | 76, 256, 262, 266 |
| NlaIII | CATG | 5 cut(s) | 21, 92, 101, 131, 263 |
| NsiI | ATGCAT | 1 cut(s) | 133 |
| NspI | RCATGY | 1 cut(s) | 131 |
| PagI | TCATGA | 1 cut(s) | 259 |
| PaqCI | CACCTGC | 1 cut(s) | 154 |
| PceI | AGGCCT | 1 cut(s) | 190 |
| PkrI | GCNGC | 1 cut(s) | 287 |
| PstI | CTGCAG | 1 cut(s) | 234 |
| PsuI | RGATCY | 1 cut(s) | 76 |
| RsaI | GTAC | 1 cut(s) | 60 |
| RsaNI | GTAC | 1 cut(s) | 59 |
| RseI | CAYNNNNRTG | 1 cut(s) | 16 |
| SatI | GCNGC | 1 cut(s) | 286 |
| Sau3AI | GATC | 4 cut(s) | 76, 256, 262, 266 |
| SbfI | CCTGCAGG | 1 cut(s) | 234 |
| SdaI | CCTGCAGG | 1 cut(s) | 234 |
| SetI | ASST | 5 cut(s) | 148, 161, 231, 300, 323 |
| SfaNI | GCATC | 1 cut(s) | 140 |
| SfcI | CTRYAG | 1 cut(s) | 230 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 16 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 234 |
| Sse9I | AATT | 2 cut(s) | 52, 242 |
| SseBI | AGGCCT | 1 cut(s) | 190 |
| SspMI | CTAG | 1 cut(s) | 183 |
| StuI | AGGCCT | 1 cut(s) | 190 |
| TaqI | TCGA | 2 cut(s) | 153, 265 |
| TasI | AATT | 2 cut(s) | 52, 242 |
| TatI | WGTACW | 1 cut(s) | 58 |
| TseI | GCWGC | 1 cut(s) | 285 |
| TspDTI | ATGAA | 1 cut(s) | 129 |
| XapI | RAATTY | 1 cut(s) | 242 |
| XceI | RCATGY | 1 cut(s) | 131 |
| XspI | CTAG | 1 cut(s) | 183 |
| Zsp2I | ATGCAT | 1 cut(s) | 133 |