gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 29, 47 |
| AatII | GACGTC | 1 cut(s) | 51 |
| AccI | GTMKAC | 1 cut(s) | 33 |
| AciI | CCGC | 1 cut(s) | 9 |
| AclWI | GGATC | 1 cut(s) | 276 |
| AcyI | GRCGYC | 1 cut(s) | 48 |
| AfaI | GTAC | 2 cut(s) | 54, 313 |
| AgsI | TTSAA | 3 cut(s) | 71, 112, 232 |
| AluBI | AGCT | 6 cut(s) | 67, 85, 149, 358, 389, 423 |
| AluI | AGCT | 6 cut(s) | 67, 85, 149, 358, 389, 423 |
| Alw21I | GWGCWC | 1 cut(s) | 245 |
| AlwI | GGATC | 1 cut(s) | 276 |
| ApeKI | GCWGC | 3 cut(s) | 12, 85, 420 |
| AsuNHI | GCTAGC | 1 cut(s) | 358 |
| Bbv12I | GWGCWC | 1 cut(s) | 245 |
| BbvI | GCAGC | 2 cut(s) | 24, 72 |
| BfaI | CTAG | 4 cut(s) | 155, 359, 374, 424 |
| BfmI | CTRYAG | 3 cut(s) | 75, 142, 162 |
| BisI | GCNGC | 4 cut(s) | 10, 13, 86, 421 |
| BlsI | GCNGC | 4 cut(s) | 11, 14, 87, 422 |
| BmiI | GGNNCC | 2 cut(s) | 60, 136 |
| BmsI | GCATC | 2 cut(s) | 114, 371 |
| BmtI | GCTAGC | 1 cut(s) | 362 |
| BpmI | CTGGAG | 1 cut(s) | 45 |
| Bpu10I | CCTNAGC | 1 cut(s) | 354 |
| BsaHI | GRCGYC | 1 cut(s) | 48 |
| Bse118I | RCCGGY | 1 cut(s) | 55 |
| BseMII | CTCAG | 3 cut(s) | 57, 201, 345 |
| BseXI | GCAGC | 2 cut(s) | 24, 72 |
| BsiHKAI | GWGCWC | 1 cut(s) | 245 |
| BsiSI | CCGG | 1 cut(s) | 56 |
| BsmI | GAATGC | 1 cut(s) | 186 |
| Bsp1286I | GDGCHC | 1 cut(s) | 245 |
| Bsp143I | GATC | 1 cut(s) | 281 |
| BspACI | CCGC | 1 cut(s) | 9 |
| BspCNI | CTCAG | 3 cut(s) | 56, 202, 346 |
| BspLI | GGNNCC | 2 cut(s) | 60, 136 |
| BspMAI | CTGCAG | 1 cut(s) | 79 |
| BspOI | GCTAGC | 1 cut(s) | 362 |
| BspPI | GGATC | 1 cut(s) | 276 |
| BspQI | GCTCTTC | 1 cut(s) | 342 |
| BsrFI | RCCGGY | 1 cut(s) | 55 |
| BssAI | RCCGGY | 1 cut(s) | 55 |
| BssMI | GATC | 1 cut(s) | 281 |
| BssNI | GRCGYC | 1 cut(s) | 48 |
| Bst4CI | ACNGT | 2 cut(s) | 116, 331 |
| Bst6I | CTCTTC | 1 cut(s) | 342 |
| BstACI | GRCGYC | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 360 |
| BstDEI | CTNAG | 5 cut(s) | 43, 210, 297, 354, 390 |
| BstKTI | GATC | 1 cut(s) | 284 |
| BstMBI | GATC | 1 cut(s) | 281 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 420 |
| BstSFI | CTRYAG | 3 cut(s) | 75, 142, 162 |
| BstV1I | GCAGC | 2 cut(s) | 24, 72 |
| BstX2I | RGATCY | 1 cut(s) | 281 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 292 |
| BstYI | RGATCY | 1 cut(s) | 281 |
| BtsIMutI | CAGTG | 1 cut(s) | 121 |
| Cac8I | GCNNGC | 1 cut(s) | 360 |
| Cfr10I | RCCGGY | 1 cut(s) | 55 |
| Csp6I | GTAC | 2 cut(s) | 53, 312 |
| CviAII | CATG | 3 cut(s) | 89, 103, 185 |
| CviQI | GTAC | 2 cut(s) | 53, 312 |
| DdeI | CTNAG | 5 cut(s) | 43, 210, 297, 354, 390 |
| DpnI | GATC | 1 cut(s) | 283 |
| DpnII | GATC | 1 cut(s) | 281 |
| DraI | TTTAAA | 1 cut(s) | 397 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 29, 47 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 29, 47 |
| Eam1104I | CTCTTC | 1 cut(s) | 342 |
| EarI | CTCTTC | 1 cut(s) | 342 |
| EcoT22I | ATGCAT | 1 cut(s) | 186 |
| FaeI | CATG | 3 cut(s) | 92, 106, 188 |
| FatI | CATG | 3 cut(s) | 88, 102, 184 |
| FblI | GTMKAC | 1 cut(s) | 33 |
| Fnu4HI | GCNGC | 4 cut(s) | 10, 13, 86, 421 |
| Fsp4HI | GCNGC | 4 cut(s) | 10, 13, 86, 421 |
| FspBI | CTAG | 4 cut(s) | 155, 359, 374, 424 |
| GluI | GCNGC | 4 cut(s) | 10, 13, 86, 421 |
| GsuI | CTGGAG | 1 cut(s) | 45 |
| HapII | CCGG | 1 cut(s) | 56 |
| Hin1I | GRCGYC | 1 cut(s) | 48 |
| Hin1II | CATG | 3 cut(s) | 92, 106, 188 |
| HincII | GTYRAC | 2 cut(s) | 34, 40 |
| HindII | GTYRAC | 2 cut(s) | 34, 40 |
| HinfI | GANTC | 3 cut(s) | 41, 71, 158 |
| HpaII | CCGG | 1 cut(s) | 56 |
| Hpy166II | GTNNAC | 2 cut(s) | 34, 40 |
| Hpy188I | TCNGA | 3 cut(s) | 46, 335, 367 |
| Hpy188III | TCNNGA | 3 cut(s) | 62, 121, 374 |
| Hpy8I | GTNNAC | 2 cut(s) | 34, 40 |
| Hpy99I | CGWCG | 2 cut(s) | 38, 53 |
| HpyCH4III | ACNGT | 2 cut(s) | 116, 331 |
| HpyCH4IV | ACGT | 2 cut(s) | 36, 48 |
| HpyCH4V | TGCA | 3 cut(s) | 77, 88, 184 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 420 |
| HpyF3I | CTNAG | 5 cut(s) | 43, 210, 297, 354, 390 |
| HpySE526I | ACGT | 2 cut(s) | 36, 48 |
| Hsp92I | GRCGYC | 1 cut(s) | 48 |
| Hsp92II | CATG | 3 cut(s) | 92, 106, 188 |
| Kzo9I | GATC | 1 cut(s) | 281 |
| LguI | GCTCTTC | 1 cut(s) | 342 |
| LmnI | GCTCC | 2 cut(s) | 64, 386 |
| LpnPI | CCDG | 3 cut(s) | 69, 75, 366 |
| Lsp1109I | GCAGC | 2 cut(s) | 24, 72 |
| LweI | GCATC | 2 cut(s) | 114, 371 |
| MaeI | CTAG | 4 cut(s) | 155, 359, 374, 424 |
| MaeII | ACGT | 2 cut(s) | 36, 48 |
| MaeIII | GTNAC | 1 cut(s) | 92 |
| MalI | GATC | 1 cut(s) | 283 |
| MboI | GATC | 1 cut(s) | 281 |
| MboII | GAAGA | 1 cut(s) | 359 |
| MflI | RGATCY | 1 cut(s) | 281 |
| MhlI | GDGCHC | 1 cut(s) | 245 |
| MluCI | AATT | 1 cut(s) | 129 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MnlI | CCTC | 4 cut(s) | 205, 314, 325, 329 |
| Mph1103I | ATGCAT | 1 cut(s) | 186 |
| MseI | TTAA | 1 cut(s) | 396 |
| MspA1I | CMGCKG | 1 cut(s) | 85 |
| MspI | CCGG | 1 cut(s) | 56 |
| Mva1269I | GAATGC | 1 cut(s) | 186 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 420 |
| NdeII | GATC | 1 cut(s) | 281 |
| NheI | GCTAGC | 1 cut(s) | 358 |
| NlaIII | CATG | 3 cut(s) | 92, 106, 188 |
| NlaIV | GGNNCC | 2 cut(s) | 60, 136 |
| NsiI | ATGCAT | 1 cut(s) | 186 |
| PciSI | GCTCTTC | 1 cut(s) | 342 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 30 |
| PctI | GAATGC | 1 cut(s) | 186 |
| PfeI | GAWTC | 2 cut(s) | 71, 158 |
| PkrI | GCNGC | 4 cut(s) | 11, 14, 87, 422 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| PspN4I | GGNNCC | 2 cut(s) | 60, 136 |
| PstI | CTGCAG | 1 cut(s) | 79 |
| PsuI | RGATCY | 1 cut(s) | 281 |
| PvuII | CAGCTG | 1 cut(s) | 85 |
| RsaI | GTAC | 2 cut(s) | 54, 313 |
| RsaNI | GTAC | 2 cut(s) | 53, 312 |
| SalI | GTCGAC | 1 cut(s) | 32 |
| SapI | GCTCTTC | 1 cut(s) | 342 |
| SaqAI | TTAA | 1 cut(s) | 396 |
| SatI | GCNGC | 4 cut(s) | 10, 13, 86, 421 |
| Sau3AI | GATC | 1 cut(s) | 281 |
| SchI | GAGTC | 1 cut(s) | 35 |
| SduI | GDGCHC | 1 cut(s) | 245 |
| SfaNI | GCATC | 2 cut(s) | 114, 371 |
| SfcI | CTRYAG | 3 cut(s) | 75, 142, 162 |
| Sse9I | AATT | 1 cut(s) | 129 |
| SsiI | CCGC | 1 cut(s) | 9 |
| SspMI | CTAG | 4 cut(s) | 155, 359, 374, 424 |
| TaaI | ACNGT | 2 cut(s) | 116, 331 |
| TaiI | ACGT | 2 cut(s) | 39, 51 |
| TaqI | TCGA | 1 cut(s) | 33 |
| TasI | AATT | 1 cut(s) | 129 |
| TauI | GCSGC | 1 cut(s) | 12 |
| TfiI | GAWTC | 2 cut(s) | 71, 158 |
| Tru1I | TTAA | 1 cut(s) | 396 |
| Tru9I | TTAA | 1 cut(s) | 396 |
| TscAI | CASTG | 1 cut(s) | 121 |
| TseI | GCWGC | 3 cut(s) | 12, 85, 420 |
| TspDTI | ATGAA | 2 cut(s) | 119, 249 |
| TspRI | CASTG | 1 cut(s) | 121 |
| XbaI | TCTAGA | 1 cut(s) | 373 |
| XmiI | GTMKAC | 1 cut(s) | 33 |
| XspI | CTAG | 4 cut(s) | 155, 359, 374, 424 |
| ZraI | GACGTC | 1 cut(s) | 49 |
| Zsp2I | ATGCAT | 1 cut(s) | 186 |