gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 87 |
| AclWI | GGATC | 1 cut(s) | 96 |
| AfaI | GTAC | 2 cut(s) | 133, 275 |
| AgsI | TTSAA | 2 cut(s) | 52, 271 |
| AluBI | AGCT | 3 cut(s) | 178, 242, 343 |
| AluI | AGCT | 3 cut(s) | 178, 242, 343 |
| Alw21I | GWGCWC | 2 cut(s) | 65, 345 |
| AlwI | GGATC | 1 cut(s) | 96 |
| ApeKI | GCWGC | 1 cut(s) | 239 |
| AsuNHI | GCTAGC | 1 cut(s) | 178 |
| BanII | GRGCYC | 1 cut(s) | 345 |
| Bbv12I | GWGCWC | 2 cut(s) | 65, 345 |
| BbvI | GCAGC | 1 cut(s) | 251 |
| BccI | CCATC | 2 cut(s) | 106, 343 |
| BclI | TGATCA | 1 cut(s) | 315 |
| BfaI | CTAG | 2 cut(s) | 179, 243 |
| BfmI | CTRYAG | 1 cut(s) | 42 |
| BisI | GCNGC | 1 cut(s) | 240 |
| BlsI | GCNGC | 1 cut(s) | 241 |
| BmsI | GCATC | 1 cut(s) | 191 |
| BmtI | GCTAGC | 1 cut(s) | 182 |
| Bpu10I | CCTNAGC | 1 cut(s) | 174 |
| BseGI | GGATG | 2 cut(s) | 117, 367 |
| BseMII | CTCAG | 3 cut(s) | 21, 165, 349 |
| BseXI | GCAGC | 1 cut(s) | 251 |
| BsiHKAI | GWGCWC | 2 cut(s) | 65, 345 |
| Bsp1286I | GDGCHC | 2 cut(s) | 65, 345 |
| Bsp143I | GATC | 3 cut(s) | 79, 101, 315 |
| BspCNI | CTCAG | 3 cut(s) | 22, 166, 348 |
| BspHI | TCATGA | 2 cut(s) | 262, 345 |
| BspMAI | CTGCAG | 1 cut(s) | 46 |
| BspOI | GCTAGC | 1 cut(s) | 182 |
| BspPI | GGATC | 1 cut(s) | 96 |
| BspQI | GCTCTTC | 1 cut(s) | 162 |
| BssMI | GATC | 3 cut(s) | 79, 101, 315 |
| Bst4CI | ACNGT | 1 cut(s) | 151 |
| Bst6I | CTCTTC | 1 cut(s) | 162 |
| BstC8I | GCNNGC | 1 cut(s) | 180 |
| BstDEI | CTNAG | 4 cut(s) | 30, 174, 252, 335 |
| BstF5I | GGATG | 2 cut(s) | 117, 367 |
| BstKTI | GATC | 3 cut(s) | 82, 104, 318 |
| BstMBI | GATC | 3 cut(s) | 79, 101, 315 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 239 |
| BstSFI | CTRYAG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 1 cut(s) | 251 |
| BstX2I | RGATCY | 1 cut(s) | 101 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 112 |
| BstYI | RGATCY | 1 cut(s) | 101 |
| BtsCI | GGATG | 2 cut(s) | 117, 367 |
| Cac8I | GCNNGC | 1 cut(s) | 180 |
| CciI | TCATGA | 2 cut(s) | 262, 345 |
| Csp6I | GTAC | 2 cut(s) | 132, 274 |
| CviAII | CATG | 3 cut(s) | 5, 263, 346 |
| CviJI | RGCY | 5 cut(s) | 116, 172, 178, 242, 343 |
| CviKI_1 | RGCY | 5 cut(s) | 116, 172, 178, 242, 343 |
| CviQI | GTAC | 2 cut(s) | 132, 274 |
| DdeI | CTNAG | 4 cut(s) | 30, 174, 252, 335 |
| DpnI | GATC | 3 cut(s) | 81, 103, 317 |
| DpnII | GATC | 3 cut(s) | 79, 101, 315 |
| DraI | TTTAAA | 1 cut(s) | 217 |
| Eam1104I | CTCTTC | 1 cut(s) | 162 |
| EarI | CTCTTC | 1 cut(s) | 162 |
| Ecl136II | GAGCTC | 1 cut(s) | 343 |
| Eco24I | GRGCYC | 1 cut(s) | 345 |
| Eco53kI | GAGCTC | 1 cut(s) | 343 |
| EcoICRI | GAGCTC | 1 cut(s) | 343 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 345 |
| FaeI | CATG | 3 cut(s) | 8, 266, 349 |
| FatI | CATG | 3 cut(s) | 4, 262, 345 |
| FbaI | TGATCA | 1 cut(s) | 315 |
| Fnu4HI | GCNGC | 1 cut(s) | 240 |
| FokI | GGATG | 1 cut(s) | 124 |
| FriOI | GRGCYC | 1 cut(s) | 345 |
| Fsp4HI | GCNGC | 1 cut(s) | 240 |
| FspBI | CTAG | 2 cut(s) | 179, 243 |
| GluI | GCNGC | 1 cut(s) | 240 |
| Hin1II | CATG | 3 cut(s) | 8, 266, 349 |
| HincII | GTYRAC | 1 cut(s) | 249 |
| HindII | GTYRAC | 1 cut(s) | 249 |
| HinfI | GANTC | 1 cut(s) | 333 |
| HpaI | GTTAAC | 1 cut(s) | 249 |
| Hpy166II | GTNNAC | 2 cut(s) | 249, 276 |
| Hpy188I | TCNGA | 1 cut(s) | 187 |
| Hpy188III | TCNNGA | 3 cut(s) | 194, 263, 346 |
| Hpy8I | GTNNAC | 2 cut(s) | 249, 276 |
| HpyCH4III | ACNGT | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 44 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 239 |
| HpyF3I | CTNAG | 4 cut(s) | 30, 174, 252, 335 |
| Hsp92II | CATG | 3 cut(s) | 8, 266, 349 |
| Ksp22I | TGATCA | 1 cut(s) | 315 |
| KspAI | GTTAAC | 1 cut(s) | 249 |
| Kzo9I | GATC | 3 cut(s) | 79, 101, 315 |
| LguI | GCTCTTC | 1 cut(s) | 162 |
| LmnI | GCTCC | 1 cut(s) | 340 |
| LpnPI | CCDG | 4 cut(s) | 54, 179, 186, 322 |
| Lsp1109I | GCAGC | 1 cut(s) | 251 |
| LweI | GCATC | 1 cut(s) | 191 |
| MaeI | CTAG | 2 cut(s) | 179, 243 |
| MalI | GATC | 3 cut(s) | 81, 103, 317 |
| MboI | GATC | 3 cut(s) | 79, 101, 315 |
| MboII | GAAGA | 2 cut(s) | 179, 322 |
| MflI | RGATCY | 1 cut(s) | 101 |
| MhlI | GDGCHC | 2 cut(s) | 65, 345 |
| MlyI | GAGTC | 1 cut(s) | 327 |
| MnlI | CCTC | 2 cut(s) | 25, 145 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 3 cut(s) | 210, 216, 248 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 239 |
| NdeII | GATC | 3 cut(s) | 79, 101, 315 |
| NheI | GCTAGC | 1 cut(s) | 178 |
| NlaIII | CATG | 3 cut(s) | 8, 266, 349 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PagI | TCATGA | 2 cut(s) | 262, 345 |
| PciSI | GCTCTTC | 1 cut(s) | 162 |
| PkrI | GCNGC | 1 cut(s) | 241 |
| PleI | GAGTC | 1 cut(s) | 327 |
| PpsI | GAGTC | 1 cut(s) | 327 |
| PsiI | TTATAA | 1 cut(s) | 87 |
| Psp124BI | GAGCTC | 1 cut(s) | 345 |
| PstI | CTGCAG | 1 cut(s) | 46 |
| PsuI | RGATCY | 1 cut(s) | 101 |
| RsaI | GTAC | 2 cut(s) | 133, 275 |
| RsaNI | GTAC | 2 cut(s) | 132, 274 |
| SacI | GAGCTC | 1 cut(s) | 345 |
| SapI | GCTCTTC | 1 cut(s) | 162 |
| SaqAI | TTAA | 3 cut(s) | 210, 216, 248 |
| SatI | GCNGC | 1 cut(s) | 240 |
| Sau3AI | GATC | 3 cut(s) | 79, 101, 315 |
| SchI | GAGTC | 1 cut(s) | 327 |
| SduI | GDGCHC | 2 cut(s) | 65, 345 |
| SetI | ASST | 6 cut(s) | 137, 180, 208, 244, 248, 345 |
| SfaNI | GCATC | 1 cut(s) | 191 |
| SfcI | CTRYAG | 1 cut(s) | 42 |
| SspMI | CTAG | 2 cut(s) | 179, 243 |
| SstI | GAGCTC | 1 cut(s) | 345 |
| TaaI | ACNGT | 1 cut(s) | 151 |
| TatI | WGTACW | 1 cut(s) | 273 |
| Tru1I | TTAA | 3 cut(s) | 210, 216, 248 |
| Tru9I | TTAA | 3 cut(s) | 210, 216, 248 |
| TseI | GCWGC | 1 cut(s) | 239 |
| TspDTI | ATGAA | 4 cut(s) | 21, 69, 251, 323 |
| TspGWI | ACGGA | 1 cut(s) | 119 |
| XspI | CTAG | 2 cut(s) | 179, 243 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |