gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 223 |
| AclWI | GGATC | 2 cut(s) | 25, 89 |
| AcsI | RAATTY | 1 cut(s) | 332 |
| AfaI | GTAC | 1 cut(s) | 124 |
| AgsI | TTSAA | 2 cut(s) | 28, 266 |
| AluBI | AGCT | 2 cut(s) | 109, 238 |
| AluI | AGCT | 2 cut(s) | 109, 238 |
| AlwI | GGATC | 2 cut(s) | 25, 89 |
| ApeKI | GCWGC | 1 cut(s) | 85 |
| ApoI | RAATTY | 1 cut(s) | 332 |
| AsuNHI | GCTAGC | 1 cut(s) | 238 |
| BanII | GRGCYC | 1 cut(s) | 307 |
| BbvI | GCAGC | 1 cut(s) | 72 |
| BccI | CCATC | 3 cut(s) | 27, 166, 332 |
| BciVI | GTATCC | 1 cut(s) | 56 |
| BfaI | CTAG | 4 cut(s) | 47, 59, 126, 239 |
| BfuI | GTATCC | 1 cut(s) | 56 |
| BglII | AGATCT | 1 cut(s) | 194 |
| BisI | GCNGC | 1 cut(s) | 86 |
| BlpI | GCTNAGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 87 |
| BmcAI | AGTACT | 1 cut(s) | 124 |
| BmiI | GGNNCC | 1 cut(s) | 304 |
| BmsI | GCATC | 1 cut(s) | 220 |
| BmtI | GCTAGC | 1 cut(s) | 242 |
| BpmI | CTGGAG | 1 cut(s) | 321 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 105 |
| Bse1I | ACTGG | 2 cut(s) | 304, 328 |
| BseGI | GGATG | 2 cut(s) | 177, 298 |
| BseMII | CTCAG | 2 cut(s) | 96, 195 |
| BseNI | ACTGG | 2 cut(s) | 304, 328 |
| BseXI | GCAGC | 1 cut(s) | 72 |
| BsmI | GAATGC | 1 cut(s) | 319 |
| Bsp1286I | GDGCHC | 1 cut(s) | 307 |
| Bsp143I | GATC | 3 cut(s) | 17, 94, 194 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 105 |
| BspCNI | CTCAG | 2 cut(s) | 97, 196 |
| BspHI | TCATGA | 1 cut(s) | 309 |
| BspLI | GGNNCC | 1 cut(s) | 304 |
| BspOI | GCTAGC | 1 cut(s) | 242 |
| BspPI | GGATC | 2 cut(s) | 25, 89 |
| BsrI | ACTGG | 2 cut(s) | 304, 328 |
| BssMI | GATC | 3 cut(s) | 17, 94, 194 |
| BssNAI | GTATAC | 1 cut(s) | 224 |
| Bst1107I | GTATAC | 1 cut(s) | 224 |
| Bst4CI | ACNGT | 1 cut(s) | 68 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 85 |
| BstC8I | GCNNGC | 1 cut(s) | 240 |
| BstDEI | CTNAG | 2 cut(s) | 105, 204 |
| BstF5I | GGATG | 2 cut(s) | 177, 298 |
| BstKTI | GATC | 3 cut(s) | 20, 97, 197 |
| BstMBI | GATC | 3 cut(s) | 17, 94, 194 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 85, 239 |
| BstNSI | RCATGY | 1 cut(s) | 83 |
| BstV1I | GCAGC | 1 cut(s) | 72 |
| BstX2I | RGATCY | 2 cut(s) | 94, 194 |
| BstYI | RGATCY | 2 cut(s) | 94, 194 |
| BstZ17I | GTATAC | 1 cut(s) | 224 |
| BsuI | GTATCC | 1 cut(s) | 56 |
| BtsCI | GGATG | 2 cut(s) | 177, 298 |
| BtsIMutI | CAGTG | 1 cut(s) | 73 |
| Cac8I | GCNNGC | 1 cut(s) | 240 |
| CciI | TCATGA | 1 cut(s) | 309 |
| Csp6I | GTAC | 1 cut(s) | 123 |
| CviAII | CATG | 3 cut(s) | 80, 89, 310 |
| CviJI | RGCY | 5 cut(s) | 109, 176, 209, 238, 305 |
| CviKI_1 | RGCY | 5 cut(s) | 109, 176, 209, 238, 305 |
| CviQI | GTAC | 1 cut(s) | 123 |
| DdeI | CTNAG | 2 cut(s) | 105, 204 |
| DpnI | GATC | 3 cut(s) | 19, 96, 196 |
| DpnII | GATC | 3 cut(s) | 17, 94, 194 |
| Eco24I | GRGCYC | 1 cut(s) | 307 |
| EcoT38I | GRGCYC | 1 cut(s) | 307 |
| FaeI | CATG | 3 cut(s) | 83, 92, 313 |
| FatI | CATG | 3 cut(s) | 79, 88, 309 |
| FblI | GTMKAC | 1 cut(s) | 223 |
| Fnu4HI | GCNGC | 1 cut(s) | 86 |
| FokI | GGATG | 2 cut(s) | 184, 305 |
| FriOI | GRGCYC | 1 cut(s) | 307 |
| Fsp4HI | GCNGC | 1 cut(s) | 86 |
| FspBI | CTAG | 4 cut(s) | 47, 59, 126, 239 |
| GluI | GCNGC | 1 cut(s) | 86 |
| GsuI | CTGGAG | 1 cut(s) | 321 |
| Hin1II | CATG | 3 cut(s) | 83, 92, 313 |
| Hpy166II | GTNNAC | 1 cut(s) | 224 |
| Hpy188I | TCNGA | 3 cut(s) | 205, 286, 356 |
| Hpy188III | TCNNGA | 1 cut(s) | 310 |
| Hpy8I | GTNNAC | 1 cut(s) | 224 |
| HpyCH4III | ACNGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 3 cut(s) | 88, 149, 233 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 85, 239 |
| HpyF3I | CTNAG | 2 cut(s) | 105, 204 |
| Hsp92II | CATG | 3 cut(s) | 83, 92, 313 |
| Kzo9I | GATC | 3 cut(s) | 17, 94, 194 |
| LmnI | GCTCC | 1 cut(s) | 302 |
| LpnPI | CCDG | 5 cut(s) | 114, 164, 240, 285, 309 |
| Lsp1109I | GCAGC | 1 cut(s) | 72 |
| LweI | GCATC | 1 cut(s) | 220 |
| MaeI | CTAG | 4 cut(s) | 47, 59, 126, 239 |
| MaeIII | GTNAC | 1 cut(s) | 68 |
| MalI | GATC | 3 cut(s) | 19, 96, 196 |
| MboI | GATC | 3 cut(s) | 17, 94, 194 |
| MboII | GAAGA | 2 cut(s) | 104, 278 |
| MflI | RGATCY | 2 cut(s) | 94, 194 |
| MhlI | GDGCHC | 1 cut(s) | 307 |
| MluCI | AATT | 1 cut(s) | 332 |
| MnlI | CCTC | 2 cut(s) | 199, 317 |
| MseI | TTAA | 3 cut(s) | 12, 213, 255 |
| Mva1269I | GAATGC | 1 cut(s) | 319 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 85, 239 |
| NdeII | GATC | 3 cut(s) | 17, 94, 194 |
| NheI | GCTAGC | 1 cut(s) | 238 |
| NlaIII | CATG | 3 cut(s) | 83, 92, 313 |
| NlaIV | GGNNCC | 1 cut(s) | 304 |
| NmuCI | GTSAC | 1 cut(s) | 68 |
| NspI | RCATGY | 1 cut(s) | 83 |
| PagI | TCATGA | 1 cut(s) | 309 |
| PctI | GAATGC | 1 cut(s) | 319 |
| PkrI | GCNGC | 1 cut(s) | 87 |
| PspN4I | GGNNCC | 1 cut(s) | 304 |
| PsuI | RGATCY | 2 cut(s) | 94, 194 |
| RsaI | GTAC | 1 cut(s) | 124 |
| RsaNI | GTAC | 1 cut(s) | 123 |
| SaqAI | TTAA | 3 cut(s) | 12, 213, 255 |
| SatI | GCNGC | 1 cut(s) | 86 |
| Sau3AI | GATC | 3 cut(s) | 17, 94, 194 |
| ScaI | AGTACT | 1 cut(s) | 124 |
| SduI | GDGCHC | 1 cut(s) | 307 |
| SetI | ASST | 8 cut(s) | 48, 111, 118, 220, 229, 240, 282, 349 |
| SfaNI | GCATC | 1 cut(s) | 220 |
| Sse9I | AATT | 1 cut(s) | 332 |
| SspMI | CTAG | 4 cut(s) | 47, 59, 126, 239 |
| TaaI | ACNGT | 1 cut(s) | 68 |
| TasI | AATT | 1 cut(s) | 332 |
| TatI | WGTACW | 1 cut(s) | 122 |
| Tru1I | TTAA | 3 cut(s) | 12, 213, 255 |
| Tru9I | TTAA | 3 cut(s) | 12, 213, 255 |
| TscAI | CASTG | 1 cut(s) | 73 |
| TseFI | GTSAC | 1 cut(s) | 68 |
| TseI | GCWGC | 1 cut(s) | 85 |
| Tsp45I | GTSAC | 1 cut(s) | 68 |
| TspDTI | ATGAA | 5 cut(s) | 105, 203, 309, 326, 344 |
| TspRI | CASTG | 1 cut(s) | 73 |
| XapI | RAATTY | 1 cut(s) | 332 |
| XceI | RCATGY | 1 cut(s) | 83 |
| XmiI | GTMKAC | 1 cut(s) | 223 |
| XspI | CTAG | 4 cut(s) | 47, 59, 126, 239 |
| ZrmI | AGTACT | 1 cut(s) | 124 |