gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 19 |
| AccI | GTMKAC | 1 cut(s) | 333 |
| AccII | CGCG | 1 cut(s) | 234 |
| AciI | CCGC | 2 cut(s) | 240, 443 |
| AclWI | GGATC | 2 cut(s) | 105, 108 |
| AcoI | YGGCCR | 1 cut(s) | 86 |
| AcyI | GRCGYC | 1 cut(s) | 357 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 84, 305, 321 |
| AgsI | TTSAA | 1 cut(s) | 272 |
| AjnI | CCWGG | 1 cut(s) | 495 |
| AluBI | AGCT | 2 cut(s) | 62, 182 |
| AluI | AGCT | 2 cut(s) | 62, 182 |
| Alw21I | GWGCWC | 1 cut(s) | 313 |
| Alw26I | GTCTC | 1 cut(s) | 399 |
| AlwI | GGATC | 2 cut(s) | 105, 108 |
| AoxI | GGCC | 3 cut(s) | 3, 79, 86 |
| ApeKI | GCWGC | 2 cut(s) | 160, 182 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 1 cut(s) | 39 |
| AsuII | TTCGAA | 1 cut(s) | 376 |
| BanI | GGYRCC | 1 cut(s) | 19 |
| Bbv12I | GWGCWC | 1 cut(s) | 313 |
| BbvI | GCAGC | 2 cut(s) | 169, 172 |
| BccI | CCATC | 2 cut(s) | 45, 58 |
| BceAI | ACGGC | 1 cut(s) | 101 |
| BciT130I | CCWGG | 1 cut(s) | 497 |
| BcoDI | GTCTC | 1 cut(s) | 399 |
| BfaI | CTAG | 1 cut(s) | 41 |
| BfmI | CTRYAG | 1 cut(s) | 14 |
| BisI | GCNGC | 2 cut(s) | 161, 183 |
| BlsI | GCNGC | 2 cut(s) | 162, 184 |
| Bme1390I | CCNGG | 1 cut(s) | 497 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmiI | GGNNCC | 1 cut(s) | 21 |
| BmrFI | CCNGG | 1 cut(s) | 497 |
| BmsI | GCATC | 1 cut(s) | 53 |
| Bpu10I | CCTNAGC | 1 cut(s) | 156 |
| Bpu14I | TTCGAA | 1 cut(s) | 376 |
| BsaHI | GRCGYC | 1 cut(s) | 357 |
| BsaJI | CCNNGG | 2 cut(s) | 213, 496 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 84, 305, 321 |
| Bse118I | RCCGGY | 1 cut(s) | 77 |
| Bse3DI | GCAATG | 1 cut(s) | 79 |
| BseBI | CCWGG | 1 cut(s) | 497 |
| BseDI | CCNNGG | 2 cut(s) | 213, 496 |
| BseGI | GGATG | 2 cut(s) | 50, 492 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 84, 305, 321 |
| BseMI | GCAATG | 1 cut(s) | 79 |
| BseXI | GCAGC | 2 cut(s) | 169, 172 |
| BsgI | GTGCAG | 1 cut(s) | 168 |
| Bsh1236I | CGCG | 1 cut(s) | 234 |
| BshFI | GGCC | 3 cut(s) | 5, 81, 88 |
| BshNI | GGYRCC | 1 cut(s) | 19 |
| BsiHKAI | GWGCWC | 1 cut(s) | 313 |
| BsiSI | CCGG | 1 cut(s) | 78 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 84, 305, 321 |
| BsmAI | GTCTC | 1 cut(s) | 399 |
| BsmBI | CGTCTC | 1 cut(s) | 399 |
| BsnI | GGCC | 3 cut(s) | 5, 81, 88 |
| Bsp119I | TTCGAA | 1 cut(s) | 376 |
| Bsp1286I | GDGCHC | 1 cut(s) | 313 |
| Bsp143I | GATC | 2 cut(s) | 97, 113 |
| Bsp68I | TCGCGA | 1 cut(s) | 234 |
| BspACI | CCGC | 2 cut(s) | 240, 443 |
| BspANI | GGCC | 3 cut(s) | 5, 81, 88 |
| BspFNI | CGCG | 1 cut(s) | 234 |
| BspLI | GGNNCC | 1 cut(s) | 21 |
| BspMAI | CTGCAG | 1 cut(s) | 18 |
| BspPI | GGATC | 2 cut(s) | 105, 108 |
| BspT104I | TTCGAA | 1 cut(s) | 376 |
| BspT107I | GGYRCC | 1 cut(s) | 19 |
| BsrDI | GCAATG | 1 cut(s) | 79 |
| BsrFI | RCCGGY | 1 cut(s) | 77 |
| BssAI | RCCGGY | 1 cut(s) | 77 |
| BssECI | CCNNGG | 2 cut(s) | 213, 496 |
| BssMI | GATC | 2 cut(s) | 97, 113 |
| BssNAI | GTATAC | 1 cut(s) | 334 |
| BssNI | GRCGYC | 1 cut(s) | 357 |
| BssT1I | CCWWGG | 1 cut(s) | 213 |
| Bst1107I | GTATAC | 1 cut(s) | 334 |
| Bst2UI | CCWGG | 1 cut(s) | 497 |
| Bst4CI | ACNGT | 1 cut(s) | 396 |
| BstACI | GRCGYC | 1 cut(s) | 357 |
| BstBI | TTCGAA | 1 cut(s) | 376 |
| BstC8I | GCNNGC | 2 cut(s) | 18, 79 |
| BstDEI | CTNAG | 3 cut(s) | 110, 137, 156 |
| BstF5I | GGATG | 2 cut(s) | 50, 492 |
| BstFNI | CGCG | 1 cut(s) | 234 |
| BstKTI | GATC | 2 cut(s) | 100, 116 |
| BstMAI | GTCTC | 1 cut(s) | 399 |
| BstMBI | GATC | 2 cut(s) | 97, 113 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 78, 166, 182, 389 |
| BstNI | CCWGG | 1 cut(s) | 497 |
| BstSCI | CCNGG | 1 cut(s) | 495 |
| BstSFI | CTRYAG | 1 cut(s) | 14 |
| BstUI | CGCG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 2 cut(s) | 169, 172 |
| BstX2I | RGATCY | 1 cut(s) | 113 |
| BstYI | RGATCY | 1 cut(s) | 113 |
| BstZ17I | GTATAC | 1 cut(s) | 334 |
| BsuRI | GGCC | 3 cut(s) | 5, 81, 88 |
| BtsCI | GGATG | 2 cut(s) | 50, 492 |
| BtuMI | TCGCGA | 1 cut(s) | 234 |
| Cac8I | GCNNGC | 2 cut(s) | 18, 79 |
| Cfr10I | RCCGGY | 1 cut(s) | 77 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CseI | GACGC | 1 cut(s) | 365 |
| CviAII | CATG | 1 cut(s) | 199 |
| CviJI | RGCY | 9 cut(s) | 5, 62, 81, 88, 141, 169, 182, 221, 340 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 62, 81, 88, 141, 169, 182, 221, 340 |
| DdeI | CTNAG | 3 cut(s) | 110, 137, 156 |
| DpnI | GATC | 2 cut(s) | 99, 115 |
| DpnII | GATC | 2 cut(s) | 97, 113 |
| EaeI | YGGCCR | 1 cut(s) | 86 |
| Eco130I | CCWWGG | 1 cut(s) | 213 |
| EcoRII | CCWGG | 1 cut(s) | 495 |
| EcoT14I | CCWWGG | 1 cut(s) | 213 |
| ErhI | CCWWGG | 1 cut(s) | 213 |
| Esp3I | CGTCTC | 1 cut(s) | 399 |
| FaeI | CATG | 1 cut(s) | 202 |
| FaiI | YATR | 7 cut(s) | 200, 225, 246, 248, 250, 334, 472 |
| FatI | CATG | 1 cut(s) | 198 |
| FauI | CCCGC | 1 cut(s) | 233 |
| FblI | GTMKAC | 1 cut(s) | 333 |
| Fnu4HI | GCNGC | 2 cut(s) | 161, 183 |
| FokI | GGATG | 2 cut(s) | 37, 479 |
| Fsp4HI | GCNGC | 2 cut(s) | 161, 183 |
| FspBI | CTAG | 1 cut(s) | 41 |
| GluI | GCNGC | 2 cut(s) | 161, 183 |
| HaeIII | GGCC | 3 cut(s) | 5, 81, 88 |
| HapII | CCGG | 1 cut(s) | 78 |
| HgaI | GACGC | 1 cut(s) | 365 |
| Hin1I | GRCGYC | 1 cut(s) | 357 |
| Hin1II | CATG | 1 cut(s) | 202 |
| HpaII | CCGG | 1 cut(s) | 78 |
| HphI | GGTGA | 1 cut(s) | 39 |
| Hpy166II | GTNNAC | 1 cut(s) | 334 |
| Hpy188I | TCNGA | 2 cut(s) | 66, 97 |
| Hpy188III | TCNNGA | 1 cut(s) | 233 |
| Hpy8I | GTNNAC | 1 cut(s) | 334 |
| HpyAV | CCTTC | 2 cut(s) | 102, 315 |
| HpyCH4III | ACNGT | 1 cut(s) | 396 |
| HpyCH4V | TGCA | 4 cut(s) | 10, 16, 185, 400 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 78, 166, 182, 389 |
| HpyF3I | CTNAG | 3 cut(s) | 110, 137, 156 |
| Hsp92I | GRCGYC | 1 cut(s) | 357 |
| Hsp92II | CATG | 1 cut(s) | 202 |
| KroI | GCCGGC | 1 cut(s) | 77 |
| KroNI | GCCGGC | 1 cut(s) | 79 |
| Kzo9I | GATC | 2 cut(s) | 97, 113 |
| LmnI | GCTCC | 2 cut(s) | 67, 316 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 172 |
| LweI | GCATC | 1 cut(s) | 53 |
| MaeI | CTAG | 1 cut(s) | 41 |
| MaeIII | GTNAC | 2 cut(s) | 276, 346 |
| MalI | GATC | 2 cut(s) | 99, 115 |
| MboI | GATC | 2 cut(s) | 97, 113 |
| MboII | GAAGA | 1 cut(s) | 120 |
| MflI | RGATCY | 1 cut(s) | 113 |
| MhlI | GDGCHC | 1 cut(s) | 313 |
| MluCI | AATT | 1 cut(s) | 286 |
| MmeI | TCCRAC | 1 cut(s) | 427 |
| MnlI | CCTC | 5 cut(s) | 34, 62, 127, 220, 351 |
| MroNI | GCCGGC | 1 cut(s) | 77 |
| MspI | CCGG | 1 cut(s) | 78 |
| MspR9I | CCNGG | 1 cut(s) | 497 |
| MvaI | CCWGG | 1 cut(s) | 497 |
| MvnI | CGCG | 1 cut(s) | 234 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 78, 166, 182, 389 |
| NaeI | GCCGGC | 1 cut(s) | 79 |
| NdeII | GATC | 2 cut(s) | 97, 113 |
| NgoMIV | GCCGGC | 1 cut(s) | 77 |
| NlaIII | CATG | 1 cut(s) | 202 |
| NlaIV | GGNNCC | 1 cut(s) | 21 |
| NmuCI | GTSAC | 1 cut(s) | 346 |
| NruI | TCGCGA | 1 cut(s) | 234 |
| NspV | TTCGAA | 1 cut(s) | 376 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 382 |
| PdiI | GCCGGC | 1 cut(s) | 79 |
| PkrI | GCNGC | 2 cut(s) | 162, 184 |
| Psp6I | CCWGG | 1 cut(s) | 495 |
| PspGI | CCWGG | 1 cut(s) | 495 |
| PspN4I | GGNNCC | 1 cut(s) | 21 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| PstI | CTGCAG | 1 cut(s) | 18 |
| PsuI | RGATCY | 1 cut(s) | 113 |
| RruI | TCGCGA | 1 cut(s) | 234 |
| SatI | GCNGC | 2 cut(s) | 161, 183 |
| Sau3AI | GATC | 2 cut(s) | 97, 113 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| ScrFI | CCNGG | 1 cut(s) | 497 |
| SduI | GDGCHC | 1 cut(s) | 313 |
| SetI | ASST | 7 cut(s) | 64, 94, 184, 283, 326, 433, 483 |
| SfaNI | GCATC | 1 cut(s) | 53 |
| SfcI | CTRYAG | 1 cut(s) | 14 |
| SfuI | TTCGAA | 1 cut(s) | 376 |
| Sse9I | AATT | 1 cut(s) | 286 |
| SsiI | CCGC | 2 cut(s) | 240, 443 |
| SspMI | CTAG | 1 cut(s) | 41 |
| StyD4I | CCNGG | 1 cut(s) | 495 |
| StyI | CCWWGG | 1 cut(s) | 213 |
| TaaI | ACNGT | 1 cut(s) | 396 |
| TaqI | TCGA | 1 cut(s) | 376 |
| TasI | AATT | 1 cut(s) | 286 |
| TseFI | GTSAC | 1 cut(s) | 346 |
| TseI | GCWGC | 2 cut(s) | 160, 182 |
| Tsp45I | GTSAC | 1 cut(s) | 346 |
| TspDTI | ATGAA | 1 cut(s) | 120 |
| XmiI | GTMKAC | 1 cut(s) | 333 |
| XspI | CTAG | 1 cut(s) | 41 |